Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 SLC17A9-205ENST00000483113 1624 ntTSL 321.62■■□□□ 1.051e-7■□□□□ 10.4
DROSHAQ9NRR4 GABRE-204ENST00000462018 650 ntTSL 313.73□□□□□ -0.212e-18■□□□□ 10.4
DROSHAQ9NRR4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.494e-7■□□□□ 10.4
DROSHAQ9NRR4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.294e-7■□□□□ 10.4
DROSHAQ9NRR4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.064e-7■□□□□ 10.4
DROSHAQ9NRR4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.914e-7■□□□□ 10.4
DROSHAQ9NRR4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.864e-7■□□□□ 10.4
DROSHAQ9NRR4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.864e-7■□□□□ 10.4
DROSHAQ9NRR4 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.884e-7■□□□□ 10.4
DROSHAQ9NRR4 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.884e-7■□□□□ 10.4
DROSHAQ9NRR4 TIAL1-211ENST00000489822 2222 ntTSL 223.94■■□□□ 1.423e-9■□□□□ 10.4
DROSHAQ9NRR4 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)21.33■■□□□ 1.013e-9■□□□□ 10.4
DROSHAQ9NRR4 TIAL1-208ENST00000470635 336 ntTSL 314.55□□□□□ -0.083e-9■□□□□ 10.4
DROSHAQ9NRR4 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.563e-9■□□□□ 10.4
DROSHAQ9NRR4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC9.98□□□□□ -0.813e-9■□□□□ 10.4
DROSHAQ9NRR4 TIAL1-209ENST00000470781 1727 ntTSL 28.63□□□□□ -1.033e-9■□□□□ 10.4
DROSHAQ9NRR4 TIAL1-204ENST00000412524 515 ntTSL 56.59□□□□□ -1.353e-9■□□□□ 10.4
DROSHAQ9NRR4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.92■■■■□ 3.982e-8■□□□□ 10.4
DROSHAQ9NRR4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.92e-8■□□□□ 10.4
DROSHAQ9NRR4 AURKAIP1-205ENST00000489799 695 ntTSL 1 (best)37.42■■■■□ 3.582e-8■□□□□ 10.4
DROSHAQ9NRR4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC33.76■■■■□ 32e-8■□□□□ 10.4
DROSHAQ9NRR4 C21orf59-206ENST00000440966 1082 ntTSL 329.24■■■□□ 2.272e-8■□□□□ 10.4
DROSHAQ9NRR4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC28.74■■■□□ 2.192e-8■□□□□ 10.4
DROSHAQ9NRR4 AURKAIP1-206ENST00000496905 608 ntTSL 228.72■■■□□ 2.192e-8■□□□□ 10.4
DROSHAQ9NRR4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC27.91■■■□□ 2.062e-8■□□□□ 10.4
DROSHAQ9NRR4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.052e-8■□□□□ 10.4
DROSHAQ9NRR4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.032e-8■□□□□ 10.4
DROSHAQ9NRR4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 22e-8■□□□□ 10.4
DROSHAQ9NRR4 C21orf59-207ENST00000458138 863 ntTSL 327.46■■□□□ 1.992e-8■□□□□ 10.4
DROSHAQ9NRR4 C21orf59-202ENST00000300260 1243 ntTSL 227.41■■□□□ 1.982e-8■□□□□ 10.4
DROSHAQ9NRR4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.932e-8■□□□□ 10.4
DROSHAQ9NRR4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.882e-8■□□□□ 10.4
DROSHAQ9NRR4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC25.31■■□□□ 1.642e-8■□□□□ 10.4
DROSHAQ9NRR4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.572e-8■□□□□ 10.4
DROSHAQ9NRR4 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC19.89■□□□□ 0.772e-8■□□□□ 10.4
DROSHAQ9NRR4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.672e-8■□□□□ 10.4
DROSHAQ9NRR4 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC14.82□□□□□ -0.042e-8■□□□□ 10.4
DROSHAQ9NRR4 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.322e-8■□□□□ 10.4
DROSHAQ9NRR4 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.722e-8■□□□□ 10.4
DROSHAQ9NRR4 TEX14-205ENST00000582740 4834 ntTSL 1 (best)9.14□□□□□ -0.952e-8■□□□□ 10.4
DROSHAQ9NRR4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.042e-8■□□□□ 10.4
DROSHAQ9NRR4 CHPF2-203ENST00000482173 548 ntTSL 430.35■■■□□ 2.453e-12■□□□□ 10.4
DROSHAQ9NRR4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.64□□□□□ -1.193e-10■□□□□ 10.4
DROSHAQ9NRR4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.533e-10■□□□□ 10.4
DROSHAQ9NRR4 SLC6A8-203ENST00000429147 334 ntTSL 225.62■■□□□ 1.692e-83■□□□□ 10.4
DROSHAQ9NRR4 SLC6A8-208ENST00000467402 308 ntTSL 518.68■□□□□ 0.582e-83■□□□□ 10.4
DROSHAQ9NRR4 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)28.64■■■□□ 2.171e-6■□□□□ 10.4
DROSHAQ9NRR4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.221e-6■□□□□ 10.4
DROSHAQ9NRR4 HMG20B-209ENST00000470356 806 ntTSL 1 (best)48.66■■■■■ 5.383e-6■□□□□ 10.4
DROSHAQ9NRR4 TRIR-204ENST00000591254 988 ntTSL 240.02■■■■■ 43e-6■□□□□ 10.4
DROSHAQ9NRR4 SMC4-206ENST00000465903 849 ntTSL 339.77■■■■□ 3.963e-6■□□□□ 10.4
DROSHAQ9NRR4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC37.17■■■■□ 3.543e-6■□□□□ 10.4
DROSHAQ9NRR4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC35.46■■■■□ 3.273e-6■□□□□ 10.4
DROSHAQ9NRR4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC35.45■■■■□ 3.273e-6■□□□□ 10.4
DROSHAQ9NRR4 HMG20B-205ENST00000435022 616 ntTSL 535.07■■■■□ 3.23e-6■□□□□ 10.4
DROSHAQ9NRR4 HMG20B-206ENST00000453933 759 ntTSL 235.06■■■■□ 3.23e-6■□□□□ 10.4
DROSHAQ9NRR4 MAN2C1-230ENST00000566099 1316 ntTSL 534.01■■■■□ 3.043e-6■□□□□ 10.4
DROSHAQ9NRR4 MAN2C1-235ENST00000567163 1356 ntTSL 534■■■■□ 3.033e-6■□□□□ 10.4
DROSHAQ9NRR4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.973e-6■□□□□ 10.4
DROSHAQ9NRR4 MAN2C1-219ENST00000564570 803 ntTSL 532.9■■■□□ 2.863e-6■□□□□ 10.4
DROSHAQ9NRR4 HMG20B-204ENST00000417382 561 ntTSL 432.47■■■□□ 2.793e-6■□□□□ 10.4
DROSHAQ9NRR4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC31.83■■■□□ 2.693e-6■□□□□ 10.4
DROSHAQ9NRR4 MAN2C1-240ENST00000569176 966 ntTSL 231.59■■■□□ 2.653e-6■□□□□ 10.4
DROSHAQ9NRR4 HNRNPDL-209ENST00000630114 1433 ntTSL 531.57■■■□□ 2.643e-6■□□□□ 10.4
DROSHAQ9NRR4 SMC4-222ENST00000490207 821 ntTSL 530.32■■■□□ 2.443e-6■□□□□ 10.4
DROSHAQ9NRR4 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)29.97■■■□□ 2.393e-6■□□□□ 10.4
DROSHAQ9NRR4 REEP4-203ENST00000518664 996 ntTSL 229.86■■■□□ 2.373e-6■□□□□ 10.4
DROSHAQ9NRR4 MAN2C1-211ENST00000563368 755 ntTSL 329.35■■■□□ 2.293e-6■□□□□ 10.4
DROSHAQ9NRR4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC28.04■■■□□ 2.083e-6■□□□□ 10.4
DROSHAQ9NRR4 RFNG-207ENST00000580953 2082 ntTSL 527.96■■■□□ 2.073e-6■□□□□ 10.4
DROSHAQ9NRR4 REEP4-204ENST00000519074 1212 ntTSL 227.64■■■□□ 2.023e-6■□□□□ 10.4
DROSHAQ9NRR4 CNOT6-203ENST00000502447 552 ntTSL 327.29■■□□□ 1.962e-24■□□□□ 10.4
DROSHAQ9NRR4 REEP4-206ENST00000521744 635 ntTSL 327.29■■□□□ 1.963e-6■□□□□ 10.4
DROSHAQ9NRR4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.953e-6■□□□□ 10.4
DROSHAQ9NRR4 SMC4-216ENST00000485645 583 ntTSL 526.74■■□□□ 1.873e-6■□□□□ 10.4
DROSHAQ9NRR4 SMC4-226ENST00000497311 708 ntTSL 526.74■■□□□ 1.873e-6■□□□□ 10.4
DROSHAQ9NRR4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.873e-6■□□□□ 10.4
DROSHAQ9NRR4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC26.6■■□□□ 1.853e-6■□□□□ 10.4
DROSHAQ9NRR4 RFNG-203ENST00000578356 649 ntTSL 525.9■■□□□ 1.743e-6■□□□□ 10.4
DROSHAQ9NRR4 REEP4-205ENST00000519875 732 ntTSL 325.82■■□□□ 1.723e-6■□□□□ 10.4
DROSHAQ9NRR4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.73e-6■□□□□ 10.4
DROSHAQ9NRR4 HMG20B-215ENST00000585741 363 ntTSL 325.59■■□□□ 1.693e-6■□□□□ 10.4
DROSHAQ9NRR4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.563e-6■□□□□ 10.4
DROSHAQ9NRR4 MAN2C1-229ENST00000566013 775 ntTSL 324.67■■□□□ 1.543e-6■□□□□ 10.4
DROSHAQ9NRR4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.523e-6■□□□□ 10.4
DROSHAQ9NRR4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC24.47■■□□□ 1.513e-6■□□□□ 10.4
DROSHAQ9NRR4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.443e-6■□□□□ 10.4
DROSHAQ9NRR4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.423e-6■□□□□ 10.4
DROSHAQ9NRR4 RFNG-211ENST00000584515 994 ntTSL 223.93■■□□□ 1.423e-6■□□□□ 10.4
DROSHAQ9NRR4 FDPS-208ENST00000470171 746 ntTSL 223.72■■□□□ 1.393e-6■□□□□ 10.4
DROSHAQ9NRR4 CTSL-206ENST00000495822 988 ntTSL 1 (best)23.2■■□□□ 1.33e-6■□□□□ 10.4
DROSHAQ9NRR4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.33e-6■□□□□ 10.4
DROSHAQ9NRR4 FDPS-213ENST00000489003 976 ntTSL 223.19■■□□□ 1.33e-6■□□□□ 10.4
DROSHAQ9NRR4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.283e-6■□□□□ 10.4
DROSHAQ9NRR4 FDPS-216ENST00000491013 912 ntTSL 522.58■■□□□ 1.213e-6■□□□□ 10.4
DROSHAQ9NRR4 MIIP-206ENST00000492256 806 ntTSL 222.58■■□□□ 1.213e-6■□□□□ 10.4
DROSHAQ9NRR4 CTSL-204ENST00000375894 975 ntTSL 321.84■■□□□ 1.093e-6■□□□□ 10.4
DROSHAQ9NRR4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.073e-6■□□□□ 10.4
DROSHAQ9NRR4 NASP-208ENST00000470768 1036 ntTSL 321.46■■□□□ 1.033e-6■□□□□ 10.4
DROSHAQ9NRR4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC21.43■■□□□ 1.023e-6■□□□□ 10.4
Retrieved 100 of 16,331 protein–RNA pairs in 72 ms