RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 NISCHQ9Y2I1 1504 aa48.32■■■■■ 5.33
CHPF2-203ENST00000482173 ABCC9O60706 1549 aa43.33■■■■■ 4.53
CHPF2-203ENST00000482173 CCDC180Q9P1Z9 1646 aa43.3■■■■■ 4.52
CHPF2-203ENST00000482173 RB1CC1Q8TDY2 1594 aa41.23■■■■■ 4.19
CHPF2-203ENST00000482173 NACADO15069 1562 aa40.96■■■■■ 4.15
CHPF2-203ENST00000482173 DCAF8L2P0C7V8 631 aa40.91■■■■■ 4.14
CHPF2-203ENST00000482173 DNAJC5BQ9UF47 199 aa40.64■■■■■ 4.1
CHPF2-203ENST00000482173 PABPN1Q86U42 306 aaKnown RBP eCLIP40.4■■■■■ 4.06
CHPF2-203ENST00000482173 MYO15BQ96JP2 1530 aa40.38■■■■■ 4.06
CHPF2-203ENST00000482173 UNC13AQ9UPW8 1703 aa40.28■■■■■ 4.04
CHPF2-203ENST00000482173 ZCCHC6Q5VYS8 1495 aaKnown RBP40.03■■■■■ 4
CHPF2-203ENST00000482173 BICRAQ9NZM4 1560 aa40.02■■■■■ 4
CHPF2-203ENST00000482173 DCAF1Q9Y4B6 1507 aa39.89■■■■□ 3.98
CHPF2-203ENST00000482173 SCRIBQ14160 1630 aa39.5■■■■□ 3.91
CHPF2-203ENST00000482173 SHROOM4Q9ULL8 1493 aa39.45■■■■□ 3.91
CHPF2-203ENST00000482173 CC2D2AQ9P2K1 1620 aa39.11■■■■□ 3.85
CHPF2-203ENST00000482173 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
CHPF2-203ENST00000482173 CECR2Q9BXF3 1484 aa39.02■■■■□ 3.84
CHPF2-203ENST00000482173 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
CHPF2-203ENST00000482173 ATAD2BQ9ULI0 1458 aa37.72■■■■□ 3.63
CHPF2-203ENST00000482173 SMARCA4P51532 1647 aa37.67■■■■□ 3.62
CHPF2-203ENST00000482173 SMARCA2P51531 1590 aa37.6■■■■□ 3.61
CHPF2-203ENST00000482173 HMGXB3Q12766 1538 aa37.51■■■■□ 3.6
CHPF2-203ENST00000482173 BAZ1AQ9NRL2 1556 aaPredicted RBP37.5■■■■□ 3.59
CHPF2-203ENST00000482173 ERCC6Q03468 1493 aa37.41■■■■□ 3.58
CHPF2-203ENST00000482173 BAZ1BQ9UIG0 1483 aaKnown RBP37.36■■■■□ 3.57
CHPF2-203ENST00000482173 CUX2O14529 1486 aa37.29■■■■□ 3.56
CHPF2-203ENST00000482173 DNAJC5Q9H3Z4 198 aa37.29■■■■□ 3.56
CHPF2-203ENST00000482173 PEG3Q9GZU2 1588 aa37.29■■■■□ 3.56
CHPF2-203ENST00000482173 MROH2BQ7Z745 1585 aa37.25■■■■□ 3.55
CHPF2-203ENST00000482173 NESP48681 1621 aa37.23■■■■□ 3.55
CHPF2-203ENST00000482173 LAMC3Q9Y6N6 1575 aa36.95■■■■□ 3.51
CHPF2-203ENST00000482173 WIZO95785 1651 aa36.8■■■■□ 3.48
CHPF2-203ENST00000482173 THOC2Q8NI27 1593 aaKnown RBP36.78■■■■□ 3.48
CHPF2-203ENST00000482173 PDS5BQ9NTI5 1447 aa36.77■■■■□ 3.48
CHPF2-203ENST00000482173 KIF21AQ7Z4S6 1674 aa36.72■■■■□ 3.47
CHPF2-203ENST00000482173 CADPSQ9ULU8 1353 aa36.7■■■■□ 3.47
CHPF2-203ENST00000482173 RSF1Q96T23 1441 aaPredicted RBP36.51■■■■□ 3.43
CHPF2-203ENST00000482173 MRC2Q9UBG0 1479 aa36.43■■■■□ 3.42
CHPF2-203ENST00000482173 TOP2AP11388 1531 aaKnown RBP36.32■■■■□ 3.4
CHPF2-203ENST00000482173 WDR62O43379 1518 aa36.31■■■■□ 3.4
CHPF2-203ENST00000482173 CEP164Q9UPV0 1460 aa36.3■■■■□ 3.4
CHPF2-203ENST00000482173 CFTRP13569 1480 aa36.27■■■■□ 3.4
CHPF2-203ENST00000482173 FANCD2Q9BXW9 1451 aa36.27■■■■□ 3.4
CHPF2-203ENST00000482173 URB2Q14146 1524 aaKnown RBP35.96■■■■□ 3.35
CHPF2-203ENST00000482173 CCDC88BA6NC98 1476 aa35.94■■■■□ 3.34
CHPF2-203ENST00000482173 PRDM2Q13029 1718 aa35.86■■■■□ 3.33
CHPF2-203ENST00000482173 TRIM41Q8WV44 630 aa35.71■■■■□ 3.31
CHPF2-203ENST00000482173 OSCARQ8IYS5 282 aa35.68■■■■□ 3.3
CHPF2-203ENST00000482173 TOPBP1Q92547 1522 aa35.58■■■■□ 3.29
CHPF2-203ENST00000482173 IFT140Q96RY7 1462 aa35.57■■■■□ 3.28
CHPF2-203ENST00000482173 ABCC8Q09428 1581 aa35.52■■■■□ 3.28
CHPF2-203ENST00000482173 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
CHPF2-203ENST00000482173 DNMBPQ6XZF7 1577 aa35.44■■■■□ 3.26
CHPF2-203ENST00000482173 EIF4G3O43432 1585 aaKnown RBP35.29■■■■□ 3.24
CHPF2-203ENST00000482173 TARBP1Q13395 1621 aaKnown RBP35.24■■■■□ 3.23
CHPF2-203ENST00000482173 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.238e-7■■■□□ 16.1
CHPF2-203ENST00000482173 POLA1P09884 1462 aaPredicted RBP35.22■■■■□ 3.23
CHPF2-203ENST00000482173 RIMBP3CA6NJZ7 1639 aa35.14■■■■□ 3.22
CHPF2-203ENST00000482173 RIMBP3BA6NNM3 1639 aa35.14■■■■□ 3.22
CHPF2-203ENST00000482173 RIMBP3Q9UFD9 1639 aa35.14■■■■□ 3.22
CHPF2-203ENST00000482173 RAD54L2Q9Y4B4 1467 aa35.12■■■■□ 3.21
CHPF2-203ENST00000482173 SOGA1O94964 1423 aa35.11■■■■□ 3.21
CHPF2-203ENST00000482173 TDRD9Q8NDG6 1382 aaKnown RBP35.04■■■■□ 3.2
CHPF2-203ENST00000482173 FBLN2P98095 1184 aa35.04■■■■□ 3.2
CHPF2-203ENST00000482173 ARHGEF11O15085 1522 aa35.03■■■■□ 3.2
CHPF2-203ENST00000482173 CHD1O14646 1710 aa35.03■■■■□ 3.2
CHPF2-203ENST00000482173 FGD5Q6ZNL6 1462 aa35.02■■■■□ 3.2
CHPF2-203ENST00000482173 SUPT5HO00267 1087 aaKnown RBP35.01■■■■□ 3.2
CHPF2-203ENST00000482173 CUX1P39880 1505 aa34.98■■■■□ 3.19
CHPF2-203ENST00000482173 WDR97A6NE52 1622 aa34.86■■■■□ 3.17
CHPF2-203ENST00000482173 CYB5RLQ6IPT4 315 aa34.86■■■■□ 3.17
CHPF2-203ENST00000482173 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
CHPF2-203ENST00000482173 CHMP7Q8WUX9 453 aaPredicted RBP34.78■■■■□ 3.16
CHPF2-203ENST00000482173 GRIN2BQ13224 1484 aa34.77■■■■□ 3.16
CHPF2-203ENST00000482173 MAGI1Q96QZ7 1491 aaPredicted RBP34.74■■■■□ 3.15
CHPF2-203ENST00000482173 ARAP1Q96P48 1450 aa34.7■■■■□ 3.15
CHPF2-203ENST00000482173 GAPVD1Q14C86 1478 aa34.65■■■■□ 3.14
CHPF2-203ENST00000482173 SYNJ2O15056 1496 aa34.64■■■■□ 3.14
CHPF2-203ENST00000482173 SYNJ1O43426 1573 aa34.62■■■■□ 3.13
CHPF2-203ENST00000482173 CLASP1Q7Z460 1538 aa34.62■■■■□ 3.13
CHPF2-203ENST00000482173 ABCA10Q8WWZ4 1543 aa34.6■■■■□ 3.13
CHPF2-203ENST00000482173 PBRM1Q86U86 1689 aa34.6■■■■□ 3.13
CHPF2-203ENST00000482173 ABCA5Q8WWZ7 1642 aa34.52■■■■□ 3.12
CHPF2-203ENST00000482173 WRNQ14191 1432 aaPredicted RBP eCLIP34.51■■■■□ 3.12
CHPF2-203ENST00000482173 TRHP20396 242 aaPredicted RBP34.47■■■■□ 3.11
CHPF2-203ENST00000482173 TOP2BQ02880 1626 aa34.42■■■■□ 3.1
CHPF2-203ENST00000482173 BIVM-ERCC5R4GMW8 1640 aa34.41■■■■□ 3.1
CHPF2-203ENST00000482173 GRIN2AQ12879 1464 aa34.31■■■■□ 3.08
CHPF2-203ENST00000482173 ADAMTS12P58397 1594 aa34.27■■■■□ 3.08
CHPF2-203ENST00000482173 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
CHPF2-203ENST00000482173 NUP160Q12769 1436 aa34.19■■■■□ 3.06
CHPF2-203ENST00000482173 ERICH3Q5RHP9 1530 aa34.17■■■■□ 3.06
CHPF2-203ENST00000482173 CEP170Q5SW79 1584 aa34.17■■■■□ 3.06
CHPF2-203ENST00000482173 ERCC6L2Q5T890 1561 aa34.11■■■■□ 3.05
CHPF2-203ENST00000482173 SHROOM2Q13796 1616 aa34.01■■■■□ 3.03
CHPF2-203ENST00000482173 JPH4Q96JJ6 628 aa33.91■■■■□ 3.02
CHPF2-203ENST00000482173 PRG4Q92954 1404 aaPredicted RBP33.89■■■■□ 3.02
CHPF2-203ENST00000482173 KIF27Q86VH2 1401 aa33.8■■■■□ 3
CHPF2-203ENST00000482173 IGF1RP08069 1367 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms