RNA–Protein interactions for RNA: ENST00000580953.5

RFNG-207, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 5

Gene RFNG, Length 2,082 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-207ENST00000580953 NISCHQ9Y2I1 1504 aa42.49■■■■■ 4.39
RFNG-207ENST00000580953 CCDC180Q9P1Z9 1646 aa37.01■■■■□ 3.52
RFNG-207ENST00000580953 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
RFNG-207ENST00000580953 ABCC9O60706 1549 aa35.35■■■■□ 3.25
RFNG-207ENST00000580953 DCAF8L2P0C7V8 631 aa35.26■■■■□ 3.23
RFNG-207ENST00000580953 DCAF1Q9Y4B6 1507 aa35.01■■■■□ 3.2
RFNG-207ENST00000580953 SHROOM4Q9ULL8 1493 aa34.75■■■■□ 3.15
RFNG-207ENST00000580953 MYO15BQ96JP2 1530 aa34.63■■■■□ 3.13
RFNG-207ENST00000580953 NACADO15069 1562 aa34.52■■■■□ 3.12
RFNG-207ENST00000580953 RB1CC1Q8TDY2 1594 aa34.29■■■■□ 3.08
RFNG-207ENST00000580953 SCRIBQ14160 1630 aa34.21■■■■□ 3.07
RFNG-207ENST00000580953 UNC13AQ9UPW8 1703 aa33.68■■■□□ 2.98
RFNG-207ENST00000580953 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
RFNG-207ENST00000580953 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.932e-8■□□□□ 10.2
RFNG-207ENST00000580953 SUPT5HO00267 1087 aaKnown RBP33.29■■■□□ 2.92
RFNG-207ENST00000580953 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
RFNG-207ENST00000580953 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
RFNG-207ENST00000580953 MROH2BQ7Z745 1585 aa32.9■■■□□ 2.86
RFNG-207ENST00000580953 BAZ1AQ9NRL2 1556 aaPredicted RBP32.77■■■□□ 2.84
RFNG-207ENST00000580953 SMARCA4P51532 1647 aa32.7■■■□□ 2.83
RFNG-207ENST00000580953 WIZO95785 1651 aa32.62■■■□□ 2.81
RFNG-207ENST00000580953 EIF4G1Q04637 1599 aaKnown RBP32.35■■■□□ 2.77
RFNG-207ENST00000580953 PEG3Q9GZU2 1588 aa32.25■■■□□ 2.75
RFNG-207ENST00000580953 ATAD2BQ9ULI0 1458 aa32.21■■■□□ 2.75
RFNG-207ENST00000580953 TOP2AP11388 1531 aaKnown RBP32.19■■■□□ 2.74
RFNG-207ENST00000580953 SMARCA2P51531 1590 aa32.1■■■□□ 2.73
RFNG-207ENST00000580953 BAZ1BQ9UIG0 1483 aaKnown RBP32.01■■■□□ 2.71
RFNG-207ENST00000580953 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
RFNG-207ENST00000580953 CCDC88BA6NC98 1476 aa31.92■■■□□ 2.7
RFNG-207ENST00000580953 NCAPD3P42695 1498 aa31.91■■■□□ 2.7
RFNG-207ENST00000580953 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
RFNG-207ENST00000580953 HRCP23327 699 aa31.77■■■□□ 2.68
RFNG-207ENST00000580953 CHIC1Q5VXU3 224 aa31.72■■■□□ 2.67
RFNG-207ENST00000580953 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
RFNG-207ENST00000580953 ABCC8Q09428 1581 aa31.28■■■□□ 2.6
RFNG-207ENST00000580953 TRIM41Q8WV44 630 aa31.21■■■□□ 2.59
RFNG-207ENST00000580953 CFTRP13569 1480 aa31.19■■■□□ 2.58
RFNG-207ENST00000580953 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
RFNG-207ENST00000580953 NESP48681 1621 aa31.03■■■□□ 2.56
RFNG-207ENST00000580953 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
RFNG-207ENST00000580953 PCGF6Q9BYE7 350 aa30.97■■■□□ 2.55
RFNG-207ENST00000580953 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
RFNG-207ENST00000580953 SYNJ1O43426 1573 aa30.93■■■□□ 2.54
RFNG-207ENST00000580953 LAMC3Q9Y6N6 1575 aa30.82■■■□□ 2.52
RFNG-207ENST00000580953 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
RFNG-207ENST00000580953 FAM9AQ8IZU1 332 aaPredicted RBP30.78■■■□□ 2.52
RFNG-207ENST00000580953 CUX1P39880 1505 aa30.76■■■□□ 2.51
RFNG-207ENST00000580953 PPARGC1BQ86YN6 1023 aaKnown RBP30.75■■■□□ 2.51
RFNG-207ENST00000580953 TOP2BQ02880 1626 aa30.73■■■□□ 2.51
RFNG-207ENST00000580953 BIVM-ERCC5R4GMW8 1640 aa30.68■■■□□ 2.5
RFNG-207ENST00000580953 SOGA1O94964 1423 aa30.64■■■□□ 2.5
RFNG-207ENST00000580953 LOC105371045A0A1W2PR82 267 aa30.6■■■□□ 2.49
RFNG-207ENST00000580953 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
RFNG-207ENST00000580953 CEP164Q9UPV0 1460 aa30.59■■■□□ 2.49
RFNG-207ENST00000580953 RUSC2Q8N2Y8 1516 aa30.57■■■□□ 2.48
RFNG-207ENST00000580953 KIF21AQ7Z4S6 1674 aa30.57■■■□□ 2.48
RFNG-207ENST00000580953 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
RFNG-207ENST00000580953 PELP1Q8IZL8 1130 aaKnown RBP30.46■■■□□ 2.47
RFNG-207ENST00000580953 EHMT2Q96KQ7 1210 aa30.46■■■□□ 2.47
RFNG-207ENST00000580953 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.46
RFNG-207ENST00000580953 TOPBP1Q92547 1522 aa30.44■■■□□ 2.46
RFNG-207ENST00000580953 FGD5Q6ZNL6 1462 aa30.43■■■□□ 2.46
RFNG-207ENST00000580953 TRIM26Q12899 539 aaPredicted RBP30.34■■■□□ 2.45
RFNG-207ENST00000580953 EEA1Q15075 1411 aa30.32■■■□□ 2.44
RFNG-207ENST00000580953 POLA1P09884 1462 aaPredicted RBP30.31■■■□□ 2.44
RFNG-207ENST00000580953 CSRNP3Q8WYN3 585 aa30.28■■■□□ 2.44
RFNG-207ENST00000580953 RAD54L2Q9Y4B4 1467 aa30.26■■■□□ 2.43
RFNG-207ENST00000580953 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
RFNG-207ENST00000580953 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
RFNG-207ENST00000580953 CUX2O14529 1486 aa30.2■■■□□ 2.42
RFNG-207ENST00000580953 KIF27Q86VH2 1401 aa30.17■■■□□ 2.42
RFNG-207ENST00000580953 ZEB1P37275 1124 aaPredicted RBP30.16■■■□□ 2.42
RFNG-207ENST00000580953 WDR62O43379 1518 aa30.11■■■□□ 2.41
RFNG-207ENST00000580953 ABCA10Q8WWZ4 1543 aa30.09■■■□□ 2.41
RFNG-207ENST00000580953 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
RFNG-207ENST00000580953 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
RFNG-207ENST00000580953 KIF21BO75037 1637 aa30.02■■■□□ 2.4
RFNG-207ENST00000580953 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
RFNG-207ENST00000580953 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
RFNG-207ENST00000580953 GOLGA3Q08378 1498 aa29.99■■■□□ 2.39
RFNG-207ENST00000580953 IGF1RP08069 1367 aa29.98■■■□□ 2.39
RFNG-207ENST00000580953 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
RFNG-207ENST00000580953 PRXQ9BXM0 1461 aa29.97■■■□□ 2.39
RFNG-207ENST00000580953 UBTFP17480 764 aaKnown RBP29.92■■■□□ 2.38
RFNG-207ENST00000580953 ABCA5Q8WWZ7 1642 aa29.9■■■□□ 2.38
RFNG-207ENST00000580953 TNIKQ9UKE5 1360 aa29.86■■■□□ 2.37
RFNG-207ENST00000580953 GAPVD1Q14C86 1478 aa29.83■■■□□ 2.37
RFNG-207ENST00000580953 ERICH3Q5RHP9 1530 aa29.83■■■□□ 2.37
RFNG-207ENST00000580953 ZNF608Q9ULD9 1512 aaPredicted RBP29.83■■■□□ 2.37
RFNG-207ENST00000580953 IFT140Q96RY7 1462 aa29.82■■■□□ 2.36
RFNG-207ENST00000580953 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.368e-10■■■■□ 22.4
RFNG-207ENST00000580953 CARMIL1Q5VZK9 1371 aa29.79■■■□□ 2.36
RFNG-207ENST00000580953 CEP162Q5TB80 1403 aa29.77■■■□□ 2.36
RFNG-207ENST00000580953 SCAF1Q9H7N4 1312 aaKnown RBP29.76■■■□□ 2.36
RFNG-207ENST00000580953 PBRM1Q86U86 1689 aa29.67■■■□□ 2.34
RFNG-207ENST00000580953 CUL7Q14999 1698 aa29.67■■■□□ 2.34
RFNG-207ENST00000580953 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
RFNG-207ENST00000580953 RANGAP1P46060 587 aaPredicted RBP29.64■■■□□ 2.34
RFNG-207ENST00000580953 GRIN2BQ13224 1484 aa29.6■■■□□ 2.33
RFNG-207ENST00000580953 CLIP1P30622 1438 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms