RNA–Protein interactions for RNA: ENST00000306306.7

REEP4-201, Transcript of receptor accessory protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REEP4, Length 1,710 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP4-201ENST00000306306 NISCHQ9Y2I1 1504 aa41.83■■■■■ 4.29
REEP4-201ENST00000306306 CCDC180Q9P1Z9 1646 aa36.9■■■■□ 3.5
REEP4-201ENST00000306306 ABCC9O60706 1549 aa35.94■■■■□ 3.34
REEP4-201ENST00000306306 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
REEP4-201ENST00000306306 ZCCHC6Q5VYS8 1495 aaKnown RBP34.89■■■■□ 3.18
REEP4-201ENST00000306306 NACADO15069 1562 aa34.67■■■■□ 3.14
REEP4-201ENST00000306306 RB1CC1Q8TDY2 1594 aa34.63■■■■□ 3.13
REEP4-201ENST00000306306 DCAF1Q9Y4B6 1507 aa34.54■■■■□ 3.12
REEP4-201ENST00000306306 MYO15BQ96JP2 1530 aa34.53■■■■□ 3.12
REEP4-201ENST00000306306 SCRIBQ14160 1630 aa33.84■■■■□ 3.01
REEP4-201ENST00000306306 UNC13AQ9UPW8 1703 aa33.81■■■■□ 3
REEP4-201ENST00000306306 PABPN1Q86U42 306 aaKnown RBP eCLIP33.75■■■□□ 2.99
REEP4-201ENST00000306306 BICRAQ9NZM4 1560 aa33.56■■■□□ 2.96
REEP4-201ENST00000306306 SHROOM4Q9ULL8 1493 aa33.47■■■□□ 2.95
REEP4-201ENST00000306306 DNAJC5BQ9UF47 199 aa32.71■■■□□ 2.83
REEP4-201ENST00000306306 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
REEP4-201ENST00000306306 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
REEP4-201ENST00000306306 CC2D2AQ9P2K1 1620 aa32.45■■■□□ 2.79
REEP4-201ENST00000306306 BAZ1AQ9NRL2 1556 aaPredicted RBP32.38■■■□□ 2.77
REEP4-201ENST00000306306 SMARCA4P51532 1647 aa32.34■■■□□ 2.77
REEP4-201ENST00000306306 MROH2BQ7Z745 1585 aa32.27■■■□□ 2.76
REEP4-201ENST00000306306 ATAD2BQ9ULI0 1458 aa32.12■■■□□ 2.73
REEP4-201ENST00000306306 RSF1Q96T23 1441 aaPredicted RBP32.07■■■□□ 2.72
REEP4-201ENST00000306306 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
REEP4-201ENST00000306306 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
REEP4-201ENST00000306306 PEG3Q9GZU2 1588 aa31.97■■■□□ 2.71
REEP4-201ENST00000306306 WIZO95785 1651 aa31.93■■■□□ 2.7
REEP4-201ENST00000306306 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
REEP4-201ENST00000306306 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
REEP4-201ENST00000306306 SUPT5HO00267 1087 aaKnown RBP31.83■■■□□ 2.69
REEP4-201ENST00000306306 TOP2AP11388 1531 aaKnown RBP31.58■■■□□ 2.65
REEP4-201ENST00000306306 CCDC88BA6NC98 1476 aa31.28■■■□□ 2.6
REEP4-201ENST00000306306 NESP48681 1621 aa31.21■■■□□ 2.59
REEP4-201ENST00000306306 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
REEP4-201ENST00000306306 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
REEP4-201ENST00000306306 CFTRP13569 1480 aa31.02■■■□□ 2.56
REEP4-201ENST00000306306 ERCC6Q03468 1493 aa30.95■■■□□ 2.54
REEP4-201ENST00000306306 PDS5BQ9NTI5 1447 aa30.94■■■□□ 2.54
REEP4-201ENST00000306306 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
REEP4-201ENST00000306306 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
REEP4-201ENST00000306306 CEP164Q9UPV0 1460 aa30.71■■■□□ 2.51
REEP4-201ENST00000306306 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
REEP4-201ENST00000306306 PRDM2Q13029 1718 aa30.69■■■□□ 2.5
REEP4-201ENST00000306306 MRC2Q9UBG0 1479 aa30.56■■■□□ 2.48
REEP4-201ENST00000306306 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
REEP4-201ENST00000306306 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.46
REEP4-201ENST00000306306 WDR62O43379 1518 aa30.4■■■□□ 2.46
REEP4-201ENST00000306306 CUX2O14529 1486 aa30.38■■■□□ 2.45
REEP4-201ENST00000306306 TOPBP1Q92547 1522 aa30.33■■■□□ 2.45
REEP4-201ENST00000306306 ABCC8Q09428 1581 aa30.32■■■□□ 2.44
REEP4-201ENST00000306306 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
REEP4-201ENST00000306306 CUX1P39880 1505 aa30.24■■■□□ 2.43
REEP4-201ENST00000306306 WRNQ14191 1432 aaPredicted RBP eCLIP30.23■■■□□ 2.43
REEP4-201ENST00000306306 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
REEP4-201ENST00000306306 FGD5Q6ZNL6 1462 aa30.09■■■□□ 2.41
REEP4-201ENST00000306306 SYNJ1O43426 1573 aa30.08■■■□□ 2.41
REEP4-201ENST00000306306 TOP2BQ02880 1626 aa30.05■■■□□ 2.4
REEP4-201ENST00000306306 SOGA1O94964 1423 aa30.04■■■□□ 2.4
REEP4-201ENST00000306306 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
REEP4-201ENST00000306306 RAD54L2Q9Y4B4 1467 aa30.02■■■□□ 2.4
REEP4-201ENST00000306306 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
REEP4-201ENST00000306306 BIVM-ERCC5R4GMW8 1640 aa30■■■□□ 2.39
REEP4-201ENST00000306306 TARBP1Q13395 1621 aaKnown RBP29.92■■■□□ 2.38
REEP4-201ENST00000306306 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
REEP4-201ENST00000306306 TDRD9Q8NDG6 1382 aaKnown RBP29.87■■■□□ 2.37
REEP4-201ENST00000306306 AQRO60306 1485 aaKnown RBP eCLIP29.83■■■□□ 2.371e-6■■■□□ 16.7
REEP4-201ENST00000306306 ABCA10Q8WWZ4 1543 aa29.79■■■□□ 2.36
REEP4-201ENST00000306306 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
REEP4-201ENST00000306306 WDR97A6NE52 1622 aa29.7■■■□□ 2.35
REEP4-201ENST00000306306 GAPVD1Q14C86 1478 aa29.67■■■□□ 2.34
REEP4-201ENST00000306306 GRIN2BQ13224 1484 aa29.59■■■□□ 2.33
REEP4-201ENST00000306306 ABCA5Q8WWZ7 1642 aa29.58■■■□□ 2.33
REEP4-201ENST00000306306 KIF27Q86VH2 1401 aa29.57■■■□□ 2.32
REEP4-201ENST00000306306 FBLN2P98095 1184 aa29.52■■■□□ 2.32
REEP4-201ENST00000306306 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
REEP4-201ENST00000306306 PBRM1Q86U86 1689 aa29.48■■■□□ 2.31
REEP4-201ENST00000306306 RUSC2Q8N2Y8 1516 aa29.46■■■□□ 2.31
REEP4-201ENST00000306306 MAGI1Q96QZ7 1491 aaPredicted RBP29.44■■■□□ 2.3
REEP4-201ENST00000306306 CHMP7Q8WUX9 453 aaPredicted RBP29.44■■■□□ 2.3
REEP4-201ENST00000306306 IGF1RP08069 1367 aa29.44■■■□□ 2.3
REEP4-201ENST00000306306 EEA1Q15075 1411 aa29.44■■■□□ 2.3
REEP4-201ENST00000306306 ERICH3Q5RHP9 1530 aa29.43■■■□□ 2.3
REEP4-201ENST00000306306 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
REEP4-201ENST00000306306 OSCARQ8IYS5 282 aa29.35■■■□□ 2.29
REEP4-201ENST00000306306 FAM9AQ8IZU1 332 aaPredicted RBP29.35■■■□□ 2.29
REEP4-201ENST00000306306 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
REEP4-201ENST00000306306 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
REEP4-201ENST00000306306 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
REEP4-201ENST00000306306 CHD1O14646 1710 aa29.28■■■□□ 2.28
REEP4-201ENST00000306306 CARMIL1Q5VZK9 1371 aa29.27■■■□□ 2.28
REEP4-201ENST00000306306 CSRNP3Q8WYN3 585 aa29.25■■■□□ 2.27
REEP4-201ENST00000306306 GRIN2AQ12879 1464 aa29.2■■■□□ 2.27
REEP4-201ENST00000306306 CUL7Q14999 1698 aa29.2■■■□□ 2.27
REEP4-201ENST00000306306 DNAJC5Q9H3Z4 198 aa29.12■■■□□ 2.25
REEP4-201ENST00000306306 RAPGEF2Q9Y4G8 1499 aa29.1■■■□□ 2.25
REEP4-201ENST00000306306 PRXQ9BXM0 1461 aa29.06■■■□□ 2.24
REEP4-201ENST00000306306 NUP160Q12769 1436 aa29.04■■■□□ 2.24
REEP4-201ENST00000306306 KIF21BO75037 1637 aa29.03■■■□□ 2.24
REEP4-201ENST00000306306 CEP170Q5SW79 1584 aa29.03■■■□□ 2.24
REEP4-201ENST00000306306 EHMT2Q96KQ7 1210 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms