RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 NISCHQ9Y2I1 1504 aa39.45■■■■□ 3.91
HMG20B-215ENST00000585741 ABCC9O60706 1549 aa35.56■■■■□ 3.28
HMG20B-215ENST00000585741 CCDC180Q9P1Z9 1646 aa35.39■■■■□ 3.26
HMG20B-215ENST00000585741 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
HMG20B-215ENST00000585741 DNAJC5BQ9UF47 199 aa33.62■■■□□ 2.97
HMG20B-215ENST00000585741 NACADO15069 1562 aa33.51■■■□□ 2.96
HMG20B-215ENST00000585741 DCAF8L2P0C7V8 631 aa33.23■■■□□ 2.91
HMG20B-215ENST00000585741 PABPN1Q86U42 306 aaKnown RBP eCLIP33.1■■■□□ 2.89
HMG20B-215ENST00000585741 MYO15BQ96JP2 1530 aa33.06■■■□□ 2.88
HMG20B-215ENST00000585741 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
HMG20B-215ENST00000585741 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
HMG20B-215ENST00000585741 BICRAQ9NZM4 1560 aa32.89■■■□□ 2.86
HMG20B-215ENST00000585741 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
HMG20B-215ENST00000585741 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
HMG20B-215ENST00000585741 SCRIBQ14160 1630 aa32.24■■■□□ 2.75
HMG20B-215ENST00000585741 CC2D2AQ9P2K1 1620 aa32.13■■■□□ 2.73
HMG20B-215ENST00000585741 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
HMG20B-215ENST00000585741 EIF4G1Q04637 1599 aaKnown RBP32.03■■■□□ 2.72
HMG20B-215ENST00000585741 NCAPD3P42695 1498 aa31.01■■■□□ 2.55
HMG20B-215ENST00000585741 DNAJC5Q9H3Z4 198 aa30.9■■■□□ 2.54
HMG20B-215ENST00000585741 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
HMG20B-215ENST00000585741 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
HMG20B-215ENST00000585741 HMGXB3Q12766 1538 aa30.72■■■□□ 2.51
HMG20B-215ENST00000585741 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
HMG20B-215ENST00000585741 CUX2O14529 1486 aa30.7■■■□□ 2.51
HMG20B-215ENST00000585741 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
HMG20B-215ENST00000585741 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
HMG20B-215ENST00000585741 NESP48681 1621 aa30.55■■■□□ 2.48
HMG20B-215ENST00000585741 PEG3Q9GZU2 1588 aa30.52■■■□□ 2.48
HMG20B-215ENST00000585741 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
HMG20B-215ENST00000585741 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
HMG20B-215ENST00000585741 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
HMG20B-215ENST00000585741 THOC2Q8NI27 1593 aaKnown RBP30.26■■■□□ 2.43
HMG20B-215ENST00000585741 LAMC3Q9Y6N6 1575 aa30.25■■■□□ 2.43
HMG20B-215ENST00000585741 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
HMG20B-215ENST00000585741 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
HMG20B-215ENST00000585741 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
HMG20B-215ENST00000585741 WIZO95785 1651 aa30.06■■■□□ 2.4
HMG20B-215ENST00000585741 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
HMG20B-215ENST00000585741 MRC2Q9UBG0 1479 aa29.85■■■□□ 2.37
HMG20B-215ENST00000585741 WDR62O43379 1518 aa29.81■■■□□ 2.36
HMG20B-215ENST00000585741 TOP2AP11388 1531 aaKnown RBP29.81■■■□□ 2.36
HMG20B-215ENST00000585741 CFTRP13569 1480 aa29.68■■■□□ 2.34
HMG20B-215ENST00000585741 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
HMG20B-215ENST00000585741 FANCD2Q9BXW9 1451 aa29.66■■■□□ 2.34
HMG20B-215ENST00000585741 URB2Q14146 1524 aaKnown RBP29.47■■■□□ 2.31
HMG20B-215ENST00000585741 CCDC88BA6NC98 1476 aa29.46■■■□□ 2.31
HMG20B-215ENST00000585741 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
HMG20B-215ENST00000585741 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
HMG20B-215ENST00000585741 PRDM2Q13029 1718 aa29.25■■■□□ 2.27
HMG20B-215ENST00000585741 ZNF608Q9ULD9 1512 aaPredicted RBP29.14■■■□□ 2.25
HMG20B-215ENST00000585741 IFT140Q96RY7 1462 aa29.11■■■□□ 2.25
HMG20B-215ENST00000585741 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
HMG20B-215ENST00000585741 ABCC8Q09428 1581 aa28.97■■■□□ 2.23
HMG20B-215ENST00000585741 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
HMG20B-215ENST00000585741 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
HMG20B-215ENST00000585741 RIMBP3BA6NNM3 1639 aa28.92■■■□□ 2.22
HMG20B-215ENST00000585741 RIMBP3Q9UFD9 1639 aa28.92■■■□□ 2.22
HMG20B-215ENST00000585741 EIF4G3O43432 1585 aaKnown RBP28.91■■■□□ 2.22
HMG20B-215ENST00000585741 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
HMG20B-215ENST00000585741 AQRO60306 1485 aaKnown RBP eCLIP28.83■■■□□ 2.21
HMG20B-215ENST00000585741 ARHGEF11O15085 1522 aa28.82■■■□□ 2.2
HMG20B-215ENST00000585741 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
HMG20B-215ENST00000585741 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
HMG20B-215ENST00000585741 CHD1O14646 1710 aa28.7■■■□□ 2.19
HMG20B-215ENST00000585741 SOGA1O94964 1423 aa28.64■■■□□ 2.18
HMG20B-215ENST00000585741 TDRD9Q8NDG6 1382 aaKnown RBP28.62■■■□□ 2.17
HMG20B-215ENST00000585741 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
HMG20B-215ENST00000585741 CYB5RLQ6IPT4 315 aa28.59■■■□□ 2.17
HMG20B-215ENST00000585741 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
HMG20B-215ENST00000585741 CUX1P39880 1505 aa28.57■■■□□ 2.16
HMG20B-215ENST00000585741 FBLN2P98095 1184 aa28.56■■■□□ 2.16
HMG20B-215ENST00000585741 ARAP1Q96P48 1450 aa28.56■■■□□ 2.16
HMG20B-215ENST00000585741 CHIC1Q5VXU3 224 aa28.52■■■□□ 2.16
HMG20B-215ENST00000585741 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
HMG20B-215ENST00000585741 SNAPC4Q5SXM2 1469 aa28.51■■■□□ 2.15
HMG20B-215ENST00000585741 CLASP1Q7Z460 1538 aa28.44■■■□□ 2.14
HMG20B-215ENST00000585741 MAGI1Q96QZ7 1491 aaPredicted RBP28.41■■■□□ 2.14
HMG20B-215ENST00000585741 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
HMG20B-215ENST00000585741 SYNJ1O43426 1573 aa28.39■■■□□ 2.14
HMG20B-215ENST00000585741 TOP2BQ02880 1626 aa28.38■■■□□ 2.13
HMG20B-215ENST00000585741 CHMP7Q8WUX9 453 aaPredicted RBP28.36■■■□□ 2.13
HMG20B-215ENST00000585741 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
HMG20B-215ENST00000585741 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
HMG20B-215ENST00000585741 GAPVD1Q14C86 1478 aa28.28■■■□□ 2.12
HMG20B-215ENST00000585741 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
HMG20B-215ENST00000585741 PBRM1Q86U86 1689 aa28.25■■■□□ 2.11
HMG20B-215ENST00000585741 TRHP20396 242 aaPredicted RBP28.24■■■□□ 2.11
HMG20B-215ENST00000585741 ABCA5Q8WWZ7 1642 aa28.23■■■□□ 2.11
HMG20B-215ENST00000585741 GRIN2AQ12879 1464 aa28.05■■■□□ 2.08
HMG20B-215ENST00000585741 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
HMG20B-215ENST00000585741 NUP160Q12769 1436 aa28.01■■■□□ 2.07
HMG20B-215ENST00000585741 ERCC6L2Q5T890 1561 aa28■■■□□ 2.07
HMG20B-215ENST00000585741 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
HMG20B-215ENST00000585741 KIF27Q86VH2 1401 aa27.97■■■□□ 2.07
HMG20B-215ENST00000585741 FAM9AQ8IZU1 332 aaPredicted RBP27.93■■■□□ 2.06
HMG20B-215ENST00000585741 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
HMG20B-215ENST00000585741 EEA1Q15075 1411 aa27.89■■■□□ 2.06
HMG20B-215ENST00000585741 SHROOM2Q13796 1616 aa27.89■■■□□ 2.05
HMG20B-215ENST00000585741 ERICH3Q5RHP9 1530 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms