RNA–Protein interactions for RNA: ENST00000495822.1

CTSL-206, Transcript of cathepsin L, humanhuman

TSL 1 (best)

Gene CTSL, Length 988 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-206ENST00000495822 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
CTSL-206ENST00000495822 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
CTSL-206ENST00000495822 ABCC9O60706 1549 aa33.05■■■□□ 2.88
CTSL-206ENST00000495822 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.65
CTSL-206ENST00000495822 NACADO15069 1562 aa31.49■■■□□ 2.63
CTSL-206ENST00000495822 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
CTSL-206ENST00000495822 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
CTSL-206ENST00000495822 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.53
CTSL-206ENST00000495822 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
CTSL-206ENST00000495822 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
CTSL-206ENST00000495822 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
CTSL-206ENST00000495822 PABPN1Q86U42 306 aaKnown RBP eCLIP30.76■■■□□ 2.51
CTSL-206ENST00000495822 BICRAQ9NZM4 1560 aa30.67■■■□□ 2.5
CTSL-206ENST00000495822 SHROOM4Q9ULL8 1493 aa30.43■■■□□ 2.46
CTSL-206ENST00000495822 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
CTSL-206ENST00000495822 EIF4G1Q04637 1599 aaKnown RBP29.92■■■□□ 2.38
CTSL-206ENST00000495822 CC2D2AQ9P2K1 1620 aa29.91■■■□□ 2.38
CTSL-206ENST00000495822 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
CTSL-206ENST00000495822 NCAPD3P42695 1498 aa29.06■■■□□ 2.24
CTSL-206ENST00000495822 SMARCA4P51532 1647 aa28.98■■■□□ 2.23
CTSL-206ENST00000495822 ATAD2BQ9ULI0 1458 aa28.96■■■□□ 2.23
CTSL-206ENST00000495822 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
CTSL-206ENST00000495822 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
CTSL-206ENST00000495822 HMGXB3Q12766 1538 aa28.88■■■□□ 2.21
CTSL-206ENST00000495822 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
CTSL-206ENST00000495822 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
CTSL-206ENST00000495822 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
CTSL-206ENST00000495822 ERCC6Q03468 1493 aa28.57■■■□□ 2.16
CTSL-206ENST00000495822 CUX2O14529 1486 aa28.53■■■□□ 2.16
CTSL-206ENST00000495822 NESP48681 1621 aa28.43■■■□□ 2.14
CTSL-206ENST00000495822 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
CTSL-206ENST00000495822 WIZO95785 1651 aa28.26■■■□□ 2.12
CTSL-206ENST00000495822 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
CTSL-206ENST00000495822 PDS5BQ9NTI5 1447 aa28.19■■■□□ 2.1
CTSL-206ENST00000495822 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
CTSL-206ENST00000495822 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
CTSL-206ENST00000495822 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
CTSL-206ENST00000495822 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
CTSL-206ENST00000495822 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
CTSL-206ENST00000495822 MRC2Q9UBG0 1479 aa27.93■■■□□ 2.06
CTSL-206ENST00000495822 CFTRP13569 1480 aa27.89■■■□□ 2.06
CTSL-206ENST00000495822 WDR62O43379 1518 aa27.87■■■□□ 2.05
CTSL-206ENST00000495822 CEP164Q9UPV0 1460 aa27.85■■■□□ 2.05
CTSL-206ENST00000495822 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
CTSL-206ENST00000495822 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
CTSL-206ENST00000495822 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
CTSL-206ENST00000495822 URB2Q14146 1524 aaKnown RBP27.57■■■□□ 2
CTSL-206ENST00000495822 ABCC8Q09428 1581 aa27.34■■□□□ 1.97
CTSL-206ENST00000495822 TOPBP1Q92547 1522 aa27.31■■□□□ 1.96
CTSL-206ENST00000495822 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
CTSL-206ENST00000495822 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
CTSL-206ENST00000495822 OSCARQ8IYS5 282 aa27.2■■□□□ 1.94
CTSL-206ENST00000495822 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
CTSL-206ENST00000495822 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
CTSL-206ENST00000495822 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
CTSL-206ENST00000495822 POLA1P09884 1462 aaPredicted RBP27.05■■□□□ 1.92
CTSL-206ENST00000495822 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
CTSL-206ENST00000495822 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.97e-6■□□□□ 9.9
CTSL-206ENST00000495822 SOGA1O94964 1423 aa26.9■■□□□ 1.9
CTSL-206ENST00000495822 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
CTSL-206ENST00000495822 CUX1P39880 1505 aa26.89■■□□□ 1.89
CTSL-206ENST00000495822 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
CTSL-206ENST00000495822 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
CTSL-206ENST00000495822 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
CTSL-206ENST00000495822 RIMBP3CA6NJZ7 1639 aa26.81■■□□□ 1.88
CTSL-206ENST00000495822 RIMBP3BA6NNM3 1639 aa26.81■■□□□ 1.88
CTSL-206ENST00000495822 RIMBP3Q9UFD9 1639 aa26.81■■□□□ 1.88
CTSL-206ENST00000495822 CHD1O14646 1710 aa26.81■■□□□ 1.88
CTSL-206ENST00000495822 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
CTSL-206ENST00000495822 ARHGEF11O15085 1522 aa26.76■■□□□ 1.87
CTSL-206ENST00000495822 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.87
CTSL-206ENST00000495822 MAGI1Q96QZ7 1491 aaPredicted RBP26.7■■□□□ 1.87
CTSL-206ENST00000495822 GRIN2BQ13224 1484 aa26.69■■□□□ 1.86
CTSL-206ENST00000495822 FBLN2P98095 1184 aa26.68■■□□□ 1.86
CTSL-206ENST00000495822 ABCA10Q8WWZ4 1543 aa26.64■■□□□ 1.85
CTSL-206ENST00000495822 GAPVD1Q14C86 1478 aa26.61■■□□□ 1.85
CTSL-206ENST00000495822 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
CTSL-206ENST00000495822 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
CTSL-206ENST00000495822 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
CTSL-206ENST00000495822 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
CTSL-206ENST00000495822 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
CTSL-206ENST00000495822 WRNQ14191 1432 aaPredicted RBP eCLIP26.56■■□□□ 1.84
CTSL-206ENST00000495822 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
CTSL-206ENST00000495822 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
CTSL-206ENST00000495822 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
CTSL-206ENST00000495822 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
CTSL-206ENST00000495822 CYB5RLQ6IPT4 315 aa26.49■■□□□ 1.83
CTSL-206ENST00000495822 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
CTSL-206ENST00000495822 GRIN2AQ12879 1464 aa26.35■■□□□ 1.81
CTSL-206ENST00000495822 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
CTSL-206ENST00000495822 FHAD1B1AJZ9 1412 aa26.3■■□□□ 1.8
CTSL-206ENST00000495822 NUP160Q12769 1436 aa26.27■■□□□ 1.8
CTSL-206ENST00000495822 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
CTSL-206ENST00000495822 SHROOM2Q13796 1616 aa26.14■■□□□ 1.77
CTSL-206ENST00000495822 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
CTSL-206ENST00000495822 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
CTSL-206ENST00000495822 KIF27Q86VH2 1401 aa26.04■■□□□ 1.76
CTSL-206ENST00000495822 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
CTSL-206ENST00000495822 CUL7Q14999 1698 aa25.96■■□□□ 1.75
CTSL-206ENST00000495822 IGF1RP08069 1367 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms