RNA–Protein interactions for RNA: ENST00000578356.1

RFNG-203, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 5

Gene RFNG, Length 649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-203ENST00000578356 NISCHQ9Y2I1 1504 aa41.35■■■■■ 4.21
RFNG-203ENST00000578356 ABCC9O60706 1549 aa37■■■■□ 3.51
RFNG-203ENST00000578356 CCDC180Q9P1Z9 1646 aa36.97■■■■□ 3.51
RFNG-203ENST00000578356 RB1CC1Q8TDY2 1594 aa35.14■■■■□ 3.22
RFNG-203ENST00000578356 NACADO15069 1562 aa34.92■■■■□ 3.18
RFNG-203ENST00000578356 DCAF8L2P0C7V8 631 aa34.91■■■■□ 3.18
RFNG-203ENST00000578356 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
RFNG-203ENST00000578356 PABPN1Q86U42 306 aaKnown RBP eCLIP34.52■■■■□ 3.12
RFNG-203ENST00000578356 UNC13AQ9UPW8 1703 aa34.49■■■■□ 3.11
RFNG-203ENST00000578356 MYO15BQ96JP2 1530 aa34.44■■■■□ 3.1
RFNG-203ENST00000578356 ZCCHC6Q5VYS8 1495 aaKnown RBP34.29■■■■□ 3.08
RFNG-203ENST00000578356 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
RFNG-203ENST00000578356 DCAF1Q9Y4B6 1507 aa34.08■■■■□ 3.05
RFNG-203ENST00000578356 SCRIBQ14160 1630 aa33.82■■■■□ 3.01
RFNG-203ENST00000578356 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
RFNG-203ENST00000578356 CC2D2AQ9P2K1 1620 aa33.4■■■□□ 2.94
RFNG-203ENST00000578356 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
RFNG-203ENST00000578356 CECR2Q9BXF3 1484 aa33.26■■■□□ 2.92
RFNG-203ENST00000578356 NCAPD3P42695 1498 aa32.28■■■□□ 2.76
RFNG-203ENST00000578356 ATAD2BQ9ULI0 1458 aa32.24■■■□□ 2.75
RFNG-203ENST00000578356 SMARCA4P51532 1647 aa32.23■■■□□ 2.75
RFNG-203ENST00000578356 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
RFNG-203ENST00000578356 BAZ1AQ9NRL2 1556 aaPredicted RBP32.03■■■□□ 2.72
RFNG-203ENST00000578356 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
RFNG-203ENST00000578356 MROH2BQ7Z745 1585 aa31.94■■■□□ 2.7
RFNG-203ENST00000578356 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
RFNG-203ENST00000578356 PEG3Q9GZU2 1588 aa31.87■■■□□ 2.69
RFNG-203ENST00000578356 NESP48681 1621 aa31.86■■■□□ 2.69
RFNG-203ENST00000578356 ERCC6Q03468 1493 aa31.84■■■□□ 2.69
RFNG-203ENST00000578356 CUX2O14529 1486 aa31.7■■■□□ 2.66
RFNG-203ENST00000578356 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
RFNG-203ENST00000578356 WIZO95785 1651 aa31.57■■■□□ 2.64
RFNG-203ENST00000578356 LAMC3Q9Y6N6 1575 aa31.5■■■□□ 2.63
RFNG-203ENST00000578356 THOC2Q8NI27 1593 aaKnown RBP31.44■■■□□ 2.62
RFNG-203ENST00000578356 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
RFNG-203ENST00000578356 CADPSQ9ULU8 1353 aa31.31■■■□□ 2.6
RFNG-203ENST00000578356 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
RFNG-203ENST00000578356 RSF1Q96T23 1441 aaPredicted RBP31.29■■■□□ 2.6
RFNG-203ENST00000578356 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
RFNG-203ENST00000578356 MRC2Q9UBG0 1479 aa31.07■■■□□ 2.56
RFNG-203ENST00000578356 WDR62O43379 1518 aa31■■■□□ 2.55
RFNG-203ENST00000578356 CFTRP13569 1480 aa30.99■■■□□ 2.55
RFNG-203ENST00000578356 FANCD2Q9BXW9 1451 aa30.98■■■□□ 2.55
RFNG-203ENST00000578356 CEP164Q9UPV0 1460 aa30.96■■■□□ 2.55
RFNG-203ENST00000578356 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
RFNG-203ENST00000578356 URB2Q14146 1524 aaKnown RBP30.77■■■□□ 2.52
RFNG-203ENST00000578356 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
RFNG-203ENST00000578356 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
RFNG-203ENST00000578356 ZNF608Q9ULD9 1512 aaPredicted RBP30.4■■■□□ 2.46
RFNG-203ENST00000578356 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
RFNG-203ENST00000578356 IFT140Q96RY7 1462 aa30.32■■■□□ 2.44
RFNG-203ENST00000578356 OSCARQ8IYS5 282 aa30.31■■■□□ 2.44
RFNG-203ENST00000578356 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
RFNG-203ENST00000578356 ABCC8Q09428 1581 aa30.23■■■□□ 2.43
RFNG-203ENST00000578356 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
RFNG-203ENST00000578356 TARBP1Q13395 1621 aaKnown RBP30.15■■■□□ 2.42
RFNG-203ENST00000578356 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
RFNG-203ENST00000578356 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.413e-11■■■□□ 18.1
RFNG-203ENST00000578356 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
RFNG-203ENST00000578356 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
RFNG-203ENST00000578356 CUX1P39880 1505 aa29.98■■■□□ 2.39
RFNG-203ENST00000578356 RIMBP3CA6NJZ7 1639 aa29.97■■■□□ 2.39
RFNG-203ENST00000578356 RIMBP3BA6NNM3 1639 aa29.97■■■□□ 2.39
RFNG-203ENST00000578356 RIMBP3Q9UFD9 1639 aa29.97■■■□□ 2.39
RFNG-203ENST00000578356 SOGA1O94964 1423 aa29.96■■■□□ 2.39
RFNG-203ENST00000578356 FGD5Q6ZNL6 1462 aa29.95■■■□□ 2.39
RFNG-203ENST00000578356 TDRD9Q8NDG6 1382 aaKnown RBP29.95■■■□□ 2.39
RFNG-203ENST00000578356 CHD1O14646 1710 aa29.94■■■□□ 2.38
RFNG-203ENST00000578356 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
RFNG-203ENST00000578356 FBLN2P98095 1184 aa29.86■■■□□ 2.37
RFNG-203ENST00000578356 SNAPC4Q5SXM2 1469 aa29.78■■■□□ 2.36
RFNG-203ENST00000578356 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
RFNG-203ENST00000578356 CYB5RLQ6IPT4 315 aa29.67■■■□□ 2.34
RFNG-203ENST00000578356 GRIN2BQ13224 1484 aa29.66■■■□□ 2.34
RFNG-203ENST00000578356 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
RFNG-203ENST00000578356 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
RFNG-203ENST00000578356 CHMP7Q8WUX9 453 aaPredicted RBP29.61■■■□□ 2.33
RFNG-203ENST00000578356 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
RFNG-203ENST00000578356 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
RFNG-203ENST00000578356 CLASP1Q7Z460 1538 aa29.58■■■□□ 2.33
RFNG-203ENST00000578356 ABCA10Q8WWZ4 1543 aa29.58■■■□□ 2.33
RFNG-203ENST00000578356 ABCA5Q8WWZ7 1642 aa29.56■■■□□ 2.32
RFNG-203ENST00000578356 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
RFNG-203ENST00000578356 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
RFNG-203ENST00000578356 BIVM-ERCC5R4GMW8 1640 aa29.48■■■□□ 2.31
RFNG-203ENST00000578356 TOP2BQ02880 1626 aa29.47■■■□□ 2.31
RFNG-203ENST00000578356 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
RFNG-203ENST00000578356 ADAMTS12P58397 1594 aa29.31■■■□□ 2.28
RFNG-203ENST00000578356 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
RFNG-203ENST00000578356 TRHP20396 242 aaPredicted RBP29.26■■■□□ 2.27
RFNG-203ENST00000578356 CEP170Q5SW79 1584 aa29.25■■■□□ 2.27
RFNG-203ENST00000578356 ERCC6L2Q5T890 1561 aa29.24■■■□□ 2.27
RFNG-203ENST00000578356 NUP160Q12769 1436 aa29.2■■■□□ 2.27
RFNG-203ENST00000578356 FHAD1B1AJZ9 1412 aa29.2■■■□□ 2.26
RFNG-203ENST00000578356 ERICH3Q5RHP9 1530 aa29.18■■■□□ 2.26
RFNG-203ENST00000578356 SHROOM2Q13796 1616 aa29.06■■■□□ 2.24
RFNG-203ENST00000578356 PRG4Q92954 1404 aaPredicted RBP28.93■■■□□ 2.22
RFNG-203ENST00000578356 IGF1RP08069 1367 aa28.92■■■□□ 2.22
RFNG-203ENST00000578356 JPH4Q96JJ6 628 aa28.92■■■□□ 2.22
RFNG-203ENST00000578356 RUSC2Q8N2Y8 1516 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms