RNA–Protein interactions for RNA: ENST00000429147.1

SLC6A8-203, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-203ENST00000429147 NISCHQ9Y2I1 1504 aa40.95■■■■■ 4.15
SLC6A8-203ENST00000429147 CCDC180Q9P1Z9 1646 aa36.39■■■■□ 3.42
SLC6A8-203ENST00000429147 ABCC9O60706 1549 aa35.89■■■■□ 3.34
SLC6A8-203ENST00000429147 DCAF8L2P0C7V8 631 aa34.37■■■■□ 3.09
SLC6A8-203ENST00000429147 RB1CC1Q8TDY2 1594 aa34.35■■■■□ 3.09
SLC6A8-203ENST00000429147 NACADO15069 1562 aa34.27■■■■□ 3.08
SLC6A8-203ENST00000429147 ZCCHC6Q5VYS8 1495 aaKnown RBP34.05■■■■□ 3.04
SLC6A8-203ENST00000429147 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
SLC6A8-203ENST00000429147 DCAF1Q9Y4B6 1507 aa33.8■■■■□ 3
SLC6A8-203ENST00000429147 UNC13AQ9UPW8 1703 aa33.66■■■□□ 2.98
SLC6A8-203ENST00000429147 PABPN1Q86U42 306 aaKnown RBP eCLIP33.58■■■□□ 2.97
SLC6A8-203ENST00000429147 BICRAQ9NZM4 1560 aa33.42■■■□□ 2.94
SLC6A8-203ENST00000429147 SCRIBQ14160 1630 aa33.28■■■□□ 2.92
SLC6A8-203ENST00000429147 DNAJC5BQ9UF47 199 aa33.22■■■□□ 2.91
SLC6A8-203ENST00000429147 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
SLC6A8-203ENST00000429147 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
SLC6A8-203ENST00000429147 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
SLC6A8-203ENST00000429147 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
SLC6A8-203ENST00000429147 SMARCA4P51532 1647 aa31.79■■■□□ 2.68
SLC6A8-203ENST00000429147 BAZ1AQ9NRL2 1556 aaPredicted RBP31.69■■■□□ 2.66
SLC6A8-203ENST00000429147 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
SLC6A8-203ENST00000429147 NCAPD3P42695 1498 aa31.67■■■□□ 2.66
SLC6A8-203ENST00000429147 MROH2BQ7Z745 1585 aa31.61■■■□□ 2.65
SLC6A8-203ENST00000429147 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
SLC6A8-203ENST00000429147 PEG3Q9GZU2 1588 aa31.46■■■□□ 2.63
SLC6A8-203ENST00000429147 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
SLC6A8-203ENST00000429147 BAZ1BQ9UIG0 1483 aaKnown RBP31.38■■■□□ 2.61
SLC6A8-203ENST00000429147 WIZO95785 1651 aa31.26■■■□□ 2.6
SLC6A8-203ENST00000429147 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
SLC6A8-203ENST00000429147 NESP48681 1621 aa31.05■■■□□ 2.56
SLC6A8-203ENST00000429147 ERCC6Q03468 1493 aa30.87■■■□□ 2.53
SLC6A8-203ENST00000429147 TOP2AP11388 1531 aaKnown RBP30.83■■■□□ 2.53
SLC6A8-203ENST00000429147 LAMC3Q9Y6N6 1575 aa30.82■■■□□ 2.52
SLC6A8-203ENST00000429147 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
SLC6A8-203ENST00000429147 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
SLC6A8-203ENST00000429147 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
SLC6A8-203ENST00000429147 CUX2O14529 1486 aa30.57■■■□□ 2.48
SLC6A8-203ENST00000429147 CCDC88BA6NC98 1476 aa30.55■■■□□ 2.48
SLC6A8-203ENST00000429147 CFTRP13569 1480 aa30.53■■■□□ 2.48
SLC6A8-203ENST00000429147 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
SLC6A8-203ENST00000429147 FANCD2Q9BXW9 1451 aa30.39■■■□□ 2.46
SLC6A8-203ENST00000429147 MRC2Q9UBG0 1479 aa30.34■■■□□ 2.45
SLC6A8-203ENST00000429147 CEP164Q9UPV0 1460 aa30.34■■■□□ 2.45
SLC6A8-203ENST00000429147 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
SLC6A8-203ENST00000429147 WDR62O43379 1518 aa30.24■■■□□ 2.43
SLC6A8-203ENST00000429147 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
SLC6A8-203ENST00000429147 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
SLC6A8-203ENST00000429147 DNAJC5Q9H3Z4 198 aa29.95■■■□□ 2.39
SLC6A8-203ENST00000429147 TOPBP1Q92547 1522 aa29.9■■■□□ 2.38
SLC6A8-203ENST00000429147 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
SLC6A8-203ENST00000429147 ABCC8Q09428 1581 aa29.8■■■□□ 2.36
SLC6A8-203ENST00000429147 IFT140Q96RY7 1462 aa29.71■■■□□ 2.35
SLC6A8-203ENST00000429147 ZNF608Q9ULD9 1512 aaPredicted RBP29.68■■■□□ 2.34
SLC6A8-203ENST00000429147 CUX1P39880 1505 aa29.64■■■□□ 2.34
SLC6A8-203ENST00000429147 POLA1P09884 1462 aaPredicted RBP29.63■■■□□ 2.33
SLC6A8-203ENST00000429147 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
SLC6A8-203ENST00000429147 RAD54L2Q9Y4B4 1467 aa29.56■■■□□ 2.32
SLC6A8-203ENST00000429147 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
SLC6A8-203ENST00000429147 SOGA1O94964 1423 aa29.53■■■□□ 2.32
SLC6A8-203ENST00000429147 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.311e-18■■■■■ 55.5
SLC6A8-203ENST00000429147 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
SLC6A8-203ENST00000429147 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
SLC6A8-203ENST00000429147 OSCARQ8IYS5 282 aa29.36■■■□□ 2.29
SLC6A8-203ENST00000429147 WRNQ14191 1432 aaPredicted RBP eCLIP29.36■■■□□ 2.29
SLC6A8-203ENST00000429147 SYNJ1O43426 1573 aa29.32■■■□□ 2.28
SLC6A8-203ENST00000429147 TOP2BQ02880 1626 aa29.3■■■□□ 2.28
SLC6A8-203ENST00000429147 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
SLC6A8-203ENST00000429147 WDR97A6NE52 1622 aa29.28■■■□□ 2.28
SLC6A8-203ENST00000429147 ABCA10Q8WWZ4 1543 aa29.22■■■□□ 2.27
SLC6A8-203ENST00000429147 CHD1O14646 1710 aa29.17■■■□□ 2.26
SLC6A8-203ENST00000429147 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
SLC6A8-203ENST00000429147 FBLN2P98095 1184 aa29.16■■■□□ 2.26
SLC6A8-203ENST00000429147 GRIN2BQ13224 1484 aa29.16■■■□□ 2.26
SLC6A8-203ENST00000429147 GAPVD1Q14C86 1478 aa29.16■■■□□ 2.26
SLC6A8-203ENST00000429147 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
SLC6A8-203ENST00000429147 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
SLC6A8-203ENST00000429147 MAGI1Q96QZ7 1491 aaPredicted RBP29.07■■■□□ 2.24
SLC6A8-203ENST00000429147 CHMP7Q8WUX9 453 aaPredicted RBP29.03■■■□□ 2.24
SLC6A8-203ENST00000429147 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
SLC6A8-203ENST00000429147 TRIM41Q8WV44 630 aa28.91■■■□□ 2.22
SLC6A8-203ENST00000429147 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
SLC6A8-203ENST00000429147 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
SLC6A8-203ENST00000429147 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
SLC6A8-203ENST00000429147 ARHGEF11O15085 1522 aa28.87■■■□□ 2.21
SLC6A8-203ENST00000429147 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
SLC6A8-203ENST00000429147 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
SLC6A8-203ENST00000429147 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
SLC6A8-203ENST00000429147 FHAD1B1AJZ9 1412 aa28.8■■■□□ 2.2
SLC6A8-203ENST00000429147 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
SLC6A8-203ENST00000429147 KIF27Q86VH2 1401 aa28.72■■■□□ 2.19
SLC6A8-203ENST00000429147 IGF1RP08069 1367 aa28.72■■■□□ 2.19
SLC6A8-203ENST00000429147 CEP170Q5SW79 1584 aa28.69■■■□□ 2.18
SLC6A8-203ENST00000429147 NUP160Q12769 1436 aa28.68■■■□□ 2.18
SLC6A8-203ENST00000429147 CYB5RLQ6IPT4 315 aa28.67■■■□□ 2.18
SLC6A8-203ENST00000429147 ARAP1Q96P48 1450 aa28.65■■■□□ 2.18
SLC6A8-203ENST00000429147 RUSC2Q8N2Y8 1516 aa28.57■■■□□ 2.16
SLC6A8-203ENST00000429147 CUL7Q14999 1698 aa28.53■■■□□ 2.16
SLC6A8-203ENST00000429147 ERCC6L2Q5T890 1561 aa28.51■■■□□ 2.15
SLC6A8-203ENST00000429147 CARMIL1Q5VZK9 1371 aa28.5■■■□□ 2.15
SLC6A8-203ENST00000429147 SHROOM2Q13796 1616 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms