RNA–Protein interactions for RNA: ENST00000397416.1

ROMO1-205, Transcript of reactive oxygen species modulator 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene ROMO1, Length 288 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1-205ENST00000397416 NISCHQ9Y2I1 1504 aa43.07■■■■■ 4.49
ROMO1-205ENST00000397416 CCDC180Q9P1Z9 1646 aa37.91■■■■□ 3.66
ROMO1-205ENST00000397416 ABCC9O60706 1549 aa36.59■■■■□ 3.45
ROMO1-205ENST00000397416 DCAF8L2P0C7V8 631 aa35.96■■■■□ 3.35
ROMO1-205ENST00000397416 ZCCHC6Q5VYS8 1495 aaKnown RBP35.96■■■■□ 3.35
ROMO1-205ENST00000397416 DCAF1Q9Y4B6 1507 aa35.64■■■■□ 3.3
ROMO1-205ENST00000397416 NACADO15069 1562 aa35.58■■■■□ 3.29
ROMO1-205ENST00000397416 MYO15BQ96JP2 1530 aa35.56■■■■□ 3.28
ROMO1-205ENST00000397416 RB1CC1Q8TDY2 1594 aa35.46■■■■□ 3.27
ROMO1-205ENST00000397416 SCRIBQ14160 1630 aa34.69■■■■□ 3.14
ROMO1-205ENST00000397416 UNC13AQ9UPW8 1703 aa34.55■■■■□ 3.12
ROMO1-205ENST00000397416 SHROOM4Q9ULL8 1493 aa34.5■■■■□ 3.11
ROMO1-205ENST00000397416 PABPN1Q86U42 306 aaKnown RBP eCLIP34.41■■■■□ 3.1
ROMO1-205ENST00000397416 BICRAQ9NZM4 1560 aa34.31■■■■□ 3.08
ROMO1-205ENST00000397416 DNAJC5BQ9UF47 199 aa33.71■■■□□ 2.99
ROMO1-205ENST00000397416 CECR2Q9BXF3 1484 aa33.49■■■□□ 2.95
ROMO1-205ENST00000397416 EIF4G1Q04637 1599 aaKnown RBP33.37■■■□□ 2.93
ROMO1-205ENST00000397416 BAZ1AQ9NRL2 1556 aaPredicted RBP33.33■■■□□ 2.93
ROMO1-205ENST00000397416 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
ROMO1-205ENST00000397416 MROH2BQ7Z745 1585 aa33.2■■■□□ 2.91
ROMO1-205ENST00000397416 RSF1Q96T23 1441 aaPredicted RBP33.1■■■□□ 2.89
ROMO1-205ENST00000397416 CC2D2AQ9P2K1 1620 aa33.08■■■□□ 2.89
ROMO1-205ENST00000397416 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
ROMO1-205ENST00000397416 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
ROMO1-205ENST00000397416 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
ROMO1-205ENST00000397416 SUPT5HO00267 1087 aaKnown RBP32.89■■■□□ 2.86
ROMO1-205ENST00000397416 NCAPD3P42695 1498 aa32.86■■■□□ 2.85
ROMO1-205ENST00000397416 WIZO95785 1651 aa32.85■■■□□ 2.85
ROMO1-205ENST00000397416 BAZ1BQ9UIG0 1483 aaKnown RBP32.72■■■□□ 2.83
ROMO1-205ENST00000397416 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
ROMO1-205ENST00000397416 TOP2AP11388 1531 aaKnown RBP32.54■■■□□ 2.8
ROMO1-205ENST00000397416 CCDC88BA6NC98 1476 aa32.23■■■□□ 2.75
ROMO1-205ENST00000397416 CADPSQ9ULU8 1353 aa31.97■■■□□ 2.71
ROMO1-205ENST00000397416 CFTRP13569 1480 aa31.86■■■□□ 2.69
ROMO1-205ENST00000397416 LAMC3Q9Y6N6 1575 aa31.84■■■□□ 2.69
ROMO1-205ENST00000397416 NESP48681 1621 aa31.83■■■□□ 2.69
ROMO1-205ENST00000397416 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
ROMO1-205ENST00000397416 FANCD2Q9BXW9 1451 aa31.55■■■□□ 2.64
ROMO1-205ENST00000397416 PRDM2Q13029 1718 aa31.54■■■□□ 2.64
ROMO1-205ENST00000397416 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
ROMO1-205ENST00000397416 CEP164Q9UPV0 1460 aa31.44■■■□□ 2.62
ROMO1-205ENST00000397416 KIF21AQ7Z4S6 1674 aa31.4■■■□□ 2.62
ROMO1-205ENST00000397416 DNAJC5Q9H3Z4 198 aa31.3■■■□□ 2.6
ROMO1-205ENST00000397416 MRC2Q9UBG0 1479 aa31.26■■■□□ 2.59
ROMO1-205ENST00000397416 ABCC8Q09428 1581 aa31.21■■■□□ 2.59
ROMO1-205ENST00000397416 WRNQ14191 1432 aaPredicted RBP eCLIP31.19■■■□□ 2.58
ROMO1-205ENST00000397416 URB2Q14146 1524 aaKnown RBP31.17■■■□□ 2.58
ROMO1-205ENST00000397416 THOC2Q8NI27 1593 aaKnown RBP31.12■■■□□ 2.57
ROMO1-205ENST00000397416 DNMBPQ6XZF7 1577 aa31.1■■■□□ 2.57
ROMO1-205ENST00000397416 TOPBP1Q92547 1522 aa31.1■■■□□ 2.57
ROMO1-205ENST00000397416 CUX1P39880 1505 aa31.09■■■□□ 2.57
ROMO1-205ENST00000397416 WDR62O43379 1518 aa31.08■■■□□ 2.57
ROMO1-205ENST00000397416 CHIC1Q5VXU3 224 aa31.05■■■□□ 2.56
ROMO1-205ENST00000397416 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
ROMO1-205ENST00000397416 SYNJ1O43426 1573 aa31■■■□□ 2.55
ROMO1-205ENST00000397416 TOP2BQ02880 1626 aa30.99■■■□□ 2.55
ROMO1-205ENST00000397416 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.54
ROMO1-205ENST00000397416 CUX2O14529 1486 aa30.9■■■□□ 2.54
ROMO1-205ENST00000397416 FGD5Q6ZNL6 1462 aa30.9■■■□□ 2.54
ROMO1-205ENST00000397416 POLA1P09884 1462 aaPredicted RBP30.88■■■□□ 2.53
ROMO1-205ENST00000397416 SOGA1O94964 1423 aa30.86■■■□□ 2.53
ROMO1-205ENST00000397416 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
ROMO1-205ENST00000397416 RAD54L2Q9Y4B4 1467 aa30.77■■■□□ 2.52
ROMO1-205ENST00000397416 TARBP1Q13395 1621 aaKnown RBP30.67■■■□□ 2.5
ROMO1-205ENST00000397416 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
ROMO1-205ENST00000397416 TDRD9Q8NDG6 1382 aaKnown RBP30.6■■■□□ 2.49
ROMO1-205ENST00000397416 ZNF608Q9ULD9 1512 aaPredicted RBP30.55■■■□□ 2.48
ROMO1-205ENST00000397416 AQRO60306 1485 aaKnown RBP eCLIP30.52■■■□□ 2.481e-6■■■■■ 32.7
ROMO1-205ENST00000397416 KIF27Q86VH2 1401 aa30.52■■■□□ 2.48
ROMO1-205ENST00000397416 WDR97A6NE52 1622 aa30.5■■■□□ 2.47
ROMO1-205ENST00000397416 GAPVD1Q14C86 1478 aa30.46■■■□□ 2.47
ROMO1-205ENST00000397416 RUSC2Q8N2Y8 1516 aa30.41■■■□□ 2.46
ROMO1-205ENST00000397416 EIF4G3O43432 1585 aaKnown RBP30.39■■■□□ 2.46
ROMO1-205ENST00000397416 ABCA5Q8WWZ7 1642 aa30.39■■■□□ 2.46
ROMO1-205ENST00000397416 FAM9AQ8IZU1 332 aaPredicted RBP30.38■■■□□ 2.45
ROMO1-205ENST00000397416 EEA1Q15075 1411 aa30.37■■■□□ 2.45
ROMO1-205ENST00000397416 GRIN2BQ13224 1484 aa30.37■■■□□ 2.45
ROMO1-205ENST00000397416 IGF1RP08069 1367 aa30.34■■■□□ 2.45
ROMO1-205ENST00000397416 CSRNP3Q8WYN3 585 aa30.33■■■□□ 2.45
ROMO1-205ENST00000397416 ERICH3Q5RHP9 1530 aa30.28■■■□□ 2.44
ROMO1-205ENST00000397416 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
ROMO1-205ENST00000397416 SNAPC4Q5SXM2 1469 aa30.2■■■□□ 2.43
ROMO1-205ENST00000397416 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
ROMO1-205ENST00000397416 CARMIL1Q5VZK9 1371 aa30.18■■■□□ 2.42
ROMO1-205ENST00000397416 CHMP7Q8WUX9 453 aaPredicted RBP30.16■■■□□ 2.42
ROMO1-205ENST00000397416 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
ROMO1-205ENST00000397416 FBLN2P98095 1184 aa30.14■■■□□ 2.42
ROMO1-205ENST00000397416 CUL7Q14999 1698 aa30.1■■■□□ 2.41
ROMO1-205ENST00000397416 SYNJ2O15056 1496 aa30.08■■■□□ 2.41
ROMO1-205ENST00000397416 ADAMTS12P58397 1594 aa30.05■■■□□ 2.4
ROMO1-205ENST00000397416 PRXQ9BXM0 1461 aa30.05■■■□□ 2.4
ROMO1-205ENST00000397416 RAPGEF2Q9Y4G8 1499 aa30.03■■■□□ 2.4
ROMO1-205ENST00000397416 GRIN2AQ12879 1464 aa29.94■■■□□ 2.38
ROMO1-205ENST00000397416 EHMT2Q96KQ7 1210 aa29.93■■■□□ 2.38
ROMO1-205ENST00000397416 OSCARQ8IYS5 282 aa29.91■■■□□ 2.38
ROMO1-205ENST00000397416 KIF21BO75037 1637 aa29.9■■■□□ 2.38
ROMO1-205ENST00000397416 CHD1O14646 1710 aa29.88■■■□□ 2.37
ROMO1-205ENST00000397416 UBTFP17480 764 aaKnown RBP29.87■■■□□ 2.37
ROMO1-205ENST00000397416 GOLGA3Q08378 1498 aa29.85■■■□□ 2.37
ROMO1-205ENST00000397416 LOC105371045A0A1W2PR82 267 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms