RNA–Protein interactions for RNA: ENST00000301905.8

PBK-201, Transcript of PDZ binding kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PBK, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBK-201ENST00000301905 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
PBK-201ENST00000301905 CCDC180Q9P1Z9 1646 aa33.16■■■□□ 2.9
PBK-201ENST00000301905 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.76
PBK-201ENST00000301905 DCAF8L2P0C7V8 631 aa31.82■■■□□ 2.69
PBK-201ENST00000301905 SHROOM4Q9ULL8 1493 aa31.82■■■□□ 2.69
PBK-201ENST00000301905 DCAF1Q9Y4B6 1507 aa31.52■■■□□ 2.64
PBK-201ENST00000301905 ABCC9O60706 1549 aa31.36■■■□□ 2.61
PBK-201ENST00000301905 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
PBK-201ENST00000301905 NACADO15069 1562 aa30.81■■■□□ 2.52
PBK-201ENST00000301905 SCRIBQ14160 1630 aa30.81■■■□□ 2.52
PBK-201ENST00000301905 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
PBK-201ENST00000301905 RB1CC1Q8TDY2 1594 aa30.52■■■□□ 2.48
PBK-201ENST00000301905 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
PBK-201ENST00000301905 RSF1Q96T23 1441 aaPredicted RBP29.92■■■□□ 2.38
PBK-201ENST00000301905 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
PBK-201ENST00000301905 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
PBK-201ENST00000301905 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
PBK-201ENST00000301905 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
PBK-201ENST00000301905 WIZO95785 1651 aa29.55■■■□□ 2.32
PBK-201ENST00000301905 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
PBK-201ENST00000301905 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.3
PBK-201ENST00000301905 SMARCA4P51532 1647 aa29.43■■■□□ 2.3
PBK-201ENST00000301905 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
PBK-201ENST00000301905 PEG3Q9GZU2 1588 aa28.94■■■□□ 2.22
PBK-201ENST00000301905 SMARCA2P51531 1590 aa28.9■■■□□ 2.22
PBK-201ENST00000301905 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
PBK-201ENST00000301905 ATAD2BQ9ULI0 1458 aa28.86■■■□□ 2.21
PBK-201ENST00000301905 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
PBK-201ENST00000301905 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
PBK-201ENST00000301905 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
PBK-201ENST00000301905 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
PBK-201ENST00000301905 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
PBK-201ENST00000301905 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
PBK-201ENST00000301905 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
PBK-201ENST00000301905 FAM9AQ8IZU1 332 aaPredicted RBP28.4■■■□□ 2.14
PBK-201ENST00000301905 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
PBK-201ENST00000301905 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
PBK-201ENST00000301905 WRNQ14191 1432 aaPredicted RBP eCLIP28.13■■■□□ 2.09
PBK-201ENST00000301905 SYNJ1O43426 1573 aa28.09■■■□□ 2.09
PBK-201ENST00000301905 SOGA1O94964 1423 aa28.01■■■□□ 2.07
PBK-201ENST00000301905 CFTRP13569 1480 aa27.98■■■□□ 2.07
PBK-201ENST00000301905 RUSC2Q8N2Y8 1516 aa27.93■■■□□ 2.06
PBK-201ENST00000301905 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
PBK-201ENST00000301905 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
PBK-201ENST00000301905 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
PBK-201ENST00000301905 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
PBK-201ENST00000301905 CUX1P39880 1505 aa27.77■■■□□ 2.04
PBK-201ENST00000301905 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
PBK-201ENST00000301905 EEA1Q15075 1411 aa27.73■■■□□ 2.03
PBK-201ENST00000301905 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
PBK-201ENST00000301905 NESP48681 1621 aa27.67■■■□□ 2.02
PBK-201ENST00000301905 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
PBK-201ENST00000301905 GOLGA3Q08378 1498 aa27.5■■□□□ 1.99
PBK-201ENST00000301905 PCGF6Q9BYE7 350 aa27.49■■□□□ 1.99
PBK-201ENST00000301905 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
PBK-201ENST00000301905 KIF21BO75037 1637 aa27.46■■□□□ 1.99
PBK-201ENST00000301905 LAMC3Q9Y6N6 1575 aa27.46■■□□□ 1.99
PBK-201ENST00000301905 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.99
PBK-201ENST00000301905 TNIKQ9UKE5 1360 aa27.45■■□□□ 1.98
PBK-201ENST00000301905 CEP162Q5TB80 1403 aa27.43■■□□□ 1.98
PBK-201ENST00000301905 FGD5Q6ZNL6 1462 aa27.4■■□□□ 1.98
PBK-201ENST00000301905 RAPGEF2Q9Y4G8 1499 aa27.39■■□□□ 1.98
PBK-201ENST00000301905 KIF27Q86VH2 1401 aa27.35■■□□□ 1.97
PBK-201ENST00000301905 DNMBPQ6XZF7 1577 aa27.32■■□□□ 1.96
PBK-201ENST00000301905 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
PBK-201ENST00000301905 CUX2O14529 1486 aa27.29■■□□□ 1.96
PBK-201ENST00000301905 KIF21AQ7Z4S6 1674 aa27.28■■□□□ 1.96
PBK-201ENST00000301905 PRXQ9BXM0 1461 aa27.25■■□□□ 1.95
PBK-201ENST00000301905 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
PBK-201ENST00000301905 URB2Q14146 1524 aaKnown RBP27.24■■□□□ 1.95
PBK-201ENST00000301905 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
PBK-201ENST00000301905 TRIM26Q12899 539 aaPredicted RBP27.22■■□□□ 1.95
PBK-201ENST00000301905 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
PBK-201ENST00000301905 RAD54L2Q9Y4B4 1467 aa27.21■■□□□ 1.95
PBK-201ENST00000301905 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
PBK-201ENST00000301905 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
PBK-201ENST00000301905 CLIP1P30622 1438 aa27.12■■□□□ 1.93
PBK-201ENST00000301905 IGF1RP08069 1367 aa27.11■■□□□ 1.93
PBK-201ENST00000301905 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
PBK-201ENST00000301905 WDR97A6NE52 1622 aa27■■□□□ 1.91
PBK-201ENST00000301905 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
PBK-201ENST00000301905 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
PBK-201ENST00000301905 TDRD9Q8NDG6 1382 aaKnown RBP26.92■■□□□ 1.9
PBK-201ENST00000301905 MRC2Q9UBG0 1479 aa26.91■■□□□ 1.9
PBK-201ENST00000301905 VPS8Q8N3P4 1428 aa26.89■■□□□ 1.9
PBK-201ENST00000301905 ABCA5Q8WWZ7 1642 aa26.87■■□□□ 1.89
PBK-201ENST00000301905 TARBP1Q13395 1621 aaKnown RBP26.86■■□□□ 1.89
PBK-201ENST00000301905 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
PBK-201ENST00000301905 HRCP23327 699 aa26.84■■□□□ 1.89
PBK-201ENST00000301905 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
PBK-201ENST00000301905 CUL7Q14999 1698 aa26.8■■□□□ 1.88
PBK-201ENST00000301905 ERCC6Q03468 1493 aa26.78■■□□□ 1.88
PBK-201ENST00000301905 ARHGAP35Q9NRY4 1499 aa26.77■■□□□ 1.88
PBK-201ENST00000301905 WDR62O43379 1518 aa26.76■■□□□ 1.87
PBK-201ENST00000301905 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.862e-9■■■□□ 18.8
PBK-201ENST00000301905 PBRM1Q86U86 1689 aa26.66■■□□□ 1.86
PBK-201ENST00000301905 THOC2Q8NI27 1593 aaKnown RBP26.66■■□□□ 1.86
PBK-201ENST00000301905 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
PBK-201ENST00000301905 CTTNBP2Q8WZ74 1663 aa26.63■■□□□ 1.85
PBK-201ENST00000301905 APLP2Q06481 763 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms