RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 NISCHQ9Y2I1 1504 aa43.03■■■■■ 4.48
TUBB4B-202ENST00000604929 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
TUBB4B-202ENST00000604929 ZCCHC6Q5VYS8 1495 aaKnown RBP36.11■■■■□ 3.37
TUBB4B-202ENST00000604929 DCAF8L2P0C7V8 631 aa35.96■■■■□ 3.35
TUBB4B-202ENST00000604929 ABCC9O60706 1549 aa35.53■■■■□ 3.28
TUBB4B-202ENST00000604929 SHROOM4Q9ULL8 1493 aa35.52■■■■□ 3.28
TUBB4B-202ENST00000604929 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
TUBB4B-202ENST00000604929 MYO15BQ96JP2 1530 aa34.92■■■■□ 3.18
TUBB4B-202ENST00000604929 NACADO15069 1562 aa34.79■■■■□ 3.16
TUBB4B-202ENST00000604929 SCRIBQ14160 1630 aa34.56■■■■□ 3.12
TUBB4B-202ENST00000604929 RB1CC1Q8TDY2 1594 aa34.5■■■■□ 3.11
TUBB4B-202ENST00000604929 SUPT5HO00267 1087 aaKnown RBP34.26■■■■□ 3.07
TUBB4B-202ENST00000604929 UNC13AQ9UPW8 1703 aa33.83■■■■□ 3.01
TUBB4B-202ENST00000604929 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.987e-6■□□□□ 8.9
TUBB4B-202ENST00000604929 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.96
TUBB4B-202ENST00000604929 BICRAQ9NZM4 1560 aa33.51■■■□□ 2.96
TUBB4B-202ENST00000604929 RSF1Q96T23 1441 aaPredicted RBP33.5■■■□□ 2.95
TUBB4B-202ENST00000604929 MROH2BQ7Z745 1585 aa33.32■■■□□ 2.93
TUBB4B-202ENST00000604929 BAZ1AQ9NRL2 1556 aaPredicted RBP33.18■■■□□ 2.9
TUBB4B-202ENST00000604929 WIZO95785 1651 aa33.06■■■□□ 2.88
TUBB4B-202ENST00000604929 SMARCA4P51532 1647 aa33.03■■■□□ 2.88
TUBB4B-202ENST00000604929 CHIC1Q5VXU3 224 aa32.71■■■□□ 2.83
TUBB4B-202ENST00000604929 TOP2AP11388 1531 aaKnown RBP32.6■■■□□ 2.81
TUBB4B-202ENST00000604929 ATAD2BQ9ULI0 1458 aa32.52■■■□□ 2.8
TUBB4B-202ENST00000604929 PEG3Q9GZU2 1588 aa32.52■■■□□ 2.8
TUBB4B-202ENST00000604929 EIF4G1Q04637 1599 aaKnown RBP32.51■■■□□ 2.79
TUBB4B-202ENST00000604929 SMARCA2P51531 1590 aa32.41■■■□□ 2.78
TUBB4B-202ENST00000604929 CCDC88BA6NC98 1476 aa32.41■■■□□ 2.78
TUBB4B-202ENST00000604929 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
TUBB4B-202ENST00000604929 NCAPD3P42695 1498 aa32.18■■■□□ 2.74
TUBB4B-202ENST00000604929 TRIM41Q8WV44 630 aa32.1■■■□□ 2.73
TUBB4B-202ENST00000604929 HMGXB3Q12766 1538 aa32.05■■■□□ 2.72
TUBB4B-202ENST00000604929 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
TUBB4B-202ENST00000604929 ABCC8Q09428 1581 aa31.8■■■□□ 2.68
TUBB4B-202ENST00000604929 FAM9AQ8IZU1 332 aaPredicted RBP31.67■■■□□ 2.66
TUBB4B-202ENST00000604929 LOC105371045A0A1W2PR82 267 aa31.63■■■□□ 2.65
TUBB4B-202ENST00000604929 WRNQ14191 1432 aaPredicted RBP eCLIP31.52■■■□□ 2.64
TUBB4B-202ENST00000604929 CFTRP13569 1480 aa31.51■■■□□ 2.64
TUBB4B-202ENST00000604929 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
TUBB4B-202ENST00000604929 CADPSQ9ULU8 1353 aa31.44■■■□□ 2.62
TUBB4B-202ENST00000604929 SYNJ1O43426 1573 aa31.36■■■□□ 2.61
TUBB4B-202ENST00000604929 EHMT2Q96KQ7 1210 aa31.36■■■□□ 2.61
TUBB4B-202ENST00000604929 SOGA1O94964 1423 aa31.27■■■□□ 2.6
TUBB4B-202ENST00000604929 NESP48681 1621 aa31.23■■■□□ 2.59
TUBB4B-202ENST00000604929 PRDM2Q13029 1718 aa31.18■■■□□ 2.58
TUBB4B-202ENST00000604929 RUSC2Q8N2Y8 1516 aa31.16■■■□□ 2.58
TUBB4B-202ENST00000604929 TOP2BQ02880 1626 aa31.15■■■□□ 2.58
TUBB4B-202ENST00000604929 CUX1P39880 1505 aa31.12■■■□□ 2.57
TUBB4B-202ENST00000604929 FANCD2Q9BXW9 1451 aa31.09■■■□□ 2.57
TUBB4B-202ENST00000604929 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
TUBB4B-202ENST00000604929 CSRNP3Q8WYN3 585 aa31.05■■■□□ 2.56
TUBB4B-202ENST00000604929 LAMC3Q9Y6N6 1575 aa31.02■■■□□ 2.56
TUBB4B-202ENST00000604929 EEA1Q15075 1411 aa30.99■■■□□ 2.55
TUBB4B-202ENST00000604929 PDS5BQ9NTI5 1447 aa30.87■■■□□ 2.53
TUBB4B-202ENST00000604929 CEP164Q9UPV0 1460 aa30.84■■■□□ 2.53
TUBB4B-202ENST00000604929 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
TUBB4B-202ENST00000604929 UBTFP17480 764 aaKnown RBP30.76■■■□□ 2.52
TUBB4B-202ENST00000604929 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
TUBB4B-202ENST00000604929 DNMBPQ6XZF7 1577 aa30.73■■■□□ 2.51
TUBB4B-202ENST00000604929 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
TUBB4B-202ENST00000604929 KIF27Q86VH2 1401 aa30.7■■■□□ 2.5
TUBB4B-202ENST00000604929 URB2Q14146 1524 aaKnown RBP30.69■■■□□ 2.5
TUBB4B-202ENST00000604929 GOLGA3Q08378 1498 aa30.65■■■□□ 2.5
TUBB4B-202ENST00000604929 CUX2O14529 1486 aa30.64■■■□□ 2.5
TUBB4B-202ENST00000604929 RAD54L2Q9Y4B4 1467 aa30.62■■■□□ 2.49
TUBB4B-202ENST00000604929 POLA1P09884 1462 aaPredicted RBP30.61■■■□□ 2.49
TUBB4B-202ENST00000604929 TNIKQ9UKE5 1360 aa30.6■■■□□ 2.49
TUBB4B-202ENST00000604929 KIF21BO75037 1637 aa30.57■■■□□ 2.49
TUBB4B-202ENST00000604929 RAPGEF2Q9Y4G8 1499 aa30.57■■■□□ 2.48
TUBB4B-202ENST00000604929 CEP162Q5TB80 1403 aa30.49■■■□□ 2.47
TUBB4B-202ENST00000604929 PRXQ9BXM0 1461 aa30.48■■■□□ 2.47
TUBB4B-202ENST00000604929 IGF1RP08069 1367 aa30.48■■■□□ 2.47
TUBB4B-202ENST00000604929 ABCA10Q8WWZ4 1543 aa30.44■■■□□ 2.46
TUBB4B-202ENST00000604929 MRC2Q9UBG0 1479 aa30.43■■■□□ 2.46
TUBB4B-202ENST00000604929 RANGAP1P46060 587 aaPredicted RBP30.42■■■□□ 2.46
TUBB4B-202ENST00000604929 ERCC6Q03468 1493 aa30.41■■■□□ 2.46
TUBB4B-202ENST00000604929 TDRD9Q8NDG6 1382 aaKnown RBP30.37■■■□□ 2.45
TUBB4B-202ENST00000604929 ERICH3Q5RHP9 1530 aa30.35■■■□□ 2.45
TUBB4B-202ENST00000604929 CARMIL1Q5VZK9 1371 aa30.33■■■□□ 2.45
TUBB4B-202ENST00000604929 PCGF6Q9BYE7 350 aa30.26■■■□□ 2.43
TUBB4B-202ENST00000604929 PPARGC1BQ86YN6 1023 aaKnown RBP30.24■■■□□ 2.43
TUBB4B-202ENST00000604929 CLIP1P30622 1438 aa30.24■■■□□ 2.43
TUBB4B-202ENST00000604929 WDR97A6NE52 1622 aa30.24■■■□□ 2.43
TUBB4B-202ENST00000604929 WDR62O43379 1518 aa30.22■■■□□ 2.43
TUBB4B-202ENST00000604929 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
TUBB4B-202ENST00000604929 GAPVD1Q14C86 1478 aa30.2■■■□□ 2.42
TUBB4B-202ENST00000604929 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.42
TUBB4B-202ENST00000604929 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.413e-11■■■■■ 32.9
TUBB4B-202ENST00000604929 THOC2Q8NI27 1593 aaKnown RBP30.1■■■□□ 2.41
TUBB4B-202ENST00000604929 TRIM26Q12899 539 aaPredicted RBP30.08■■■□□ 2.41
TUBB4B-202ENST00000604929 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
TUBB4B-202ENST00000604929 ZNF608Q9ULD9 1512 aaPredicted RBP30.05■■■□□ 2.4
TUBB4B-202ENST00000604929 CUL7Q14999 1698 aa30.04■■■□□ 2.4
TUBB4B-202ENST00000604929 TTBK1Q5TCY1 1321 aaPredicted RBP29.98■■■□□ 2.39
TUBB4B-202ENST00000604929 VPS8Q8N3P4 1428 aa29.93■■■□□ 2.38
TUBB4B-202ENST00000604929 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
TUBB4B-202ENST00000604929 GRIN2BQ13224 1484 aa29.9■■■□□ 2.38
TUBB4B-202ENST00000604929 ARAP1Q96P48 1450 aa29.89■■■□□ 2.37
TUBB4B-202ENST00000604929 ARHGAP35Q9NRY4 1499 aa29.88■■■□□ 2.37
TUBB4B-202ENST00000604929 P3H3Q8IVL6 736 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms