Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 PVT1_1.1-201ENST00000615125 194 ntBASIC25.66■■□□□ 1.7
ZSWIM3Q96MP5 WHAMMP3-201ENST00000611636 1609 ntBASIC25.66■■□□□ 1.7
ZSWIM3Q96MP5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.65■■□□□ 1.7
ZSWIM3Q96MP5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZSWIM3Q96MP5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZSWIM3Q96MP5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZSWIM3Q96MP5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.65■■□□□ 1.7
ZSWIM3Q96MP5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.65■■□□□ 1.7
ZSWIM3Q96MP5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.64■■□□□ 1.7
ZSWIM3Q96MP5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.64■■□□□ 1.7
ZSWIM3Q96MP5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ZSWIM3Q96MP5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.64■■□□□ 1.7
ZSWIM3Q96MP5 AC018755.3-202ENST00000596210 929 ntBASIC25.64■■□□□ 1.7
ZSWIM3Q96MP5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ZSWIM3Q96MP5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZSWIM3Q96MP5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZSWIM3Q96MP5 AC139795.1-202ENST00000500444 432 ntBASIC25.63■■□□□ 1.69
ZSWIM3Q96MP5 AC103834.1-201ENST00000520383 144 ntBASIC25.63■■□□□ 1.69
ZSWIM3Q96MP5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.63■■□□□ 1.69
ZSWIM3Q96MP5 AC074183.2-201ENST00000623112 922 ntBASIC25.63■■□□□ 1.69
ZSWIM3Q96MP5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZSWIM3Q96MP5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.62■■□□□ 1.69
ZSWIM3Q96MP5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZSWIM3Q96MP5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZSWIM3Q96MP5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ZSWIM3Q96MP5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.61■■□□□ 1.69
ZSWIM3Q96MP5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ZSWIM3Q96MP5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZSWIM3Q96MP5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZSWIM3Q96MP5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZSWIM3Q96MP5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZSWIM3Q96MP5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
ZSWIM3Q96MP5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZSWIM3Q96MP5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.59■■□□□ 1.69
ZSWIM3Q96MP5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.59■■□□□ 1.69
ZSWIM3Q96MP5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZSWIM3Q96MP5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.58■■□□□ 1.69
ZSWIM3Q96MP5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZSWIM3Q96MP5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.58■■□□□ 1.69
ZSWIM3Q96MP5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.58■■□□□ 1.69
ZSWIM3Q96MP5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.58■■□□□ 1.69
ZSWIM3Q96MP5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZSWIM3Q96MP5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
ZSWIM3Q96MP5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ZSWIM3Q96MP5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZSWIM3Q96MP5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZSWIM3Q96MP5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.57■■□□□ 1.68
ZSWIM3Q96MP5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ZSWIM3Q96MP5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZSWIM3Q96MP5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ZSWIM3Q96MP5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZSWIM3Q96MP5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.56■■□□□ 1.68
ZSWIM3Q96MP5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.56■■□□□ 1.68
ZSWIM3Q96MP5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
ZSWIM3Q96MP5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.55■■□□□ 1.68
ZSWIM3Q96MP5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.55■■□□□ 1.68
ZSWIM3Q96MP5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.55■■□□□ 1.68
ZSWIM3Q96MP5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.55■■□□□ 1.68
ZSWIM3Q96MP5 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.55■■□□□ 1.68
ZSWIM3Q96MP5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZSWIM3Q96MP5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZSWIM3Q96MP5 AC139426.1-201ENST00000568218 2529 ntBASIC25.54■■□□□ 1.68
ZSWIM3Q96MP5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZSWIM3Q96MP5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ZSWIM3Q96MP5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
ZSWIM3Q96MP5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZSWIM3Q96MP5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
ZSWIM3Q96MP5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZSWIM3Q96MP5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZSWIM3Q96MP5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZSWIM3Q96MP5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZSWIM3Q96MP5 YBX1P4-201ENST00000392794 808 ntBASIC25.52■■□□□ 1.68
ZSWIM3Q96MP5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.52■■□□□ 1.68
ZSWIM3Q96MP5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZSWIM3Q96MP5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZSWIM3Q96MP5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.68
ZSWIM3Q96MP5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ZSWIM3Q96MP5 AC009299.2-201ENST00000482477 511 ntBASIC25.51■■□□□ 1.67
ZSWIM3Q96MP5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.51■■□□□ 1.67
ZSWIM3Q96MP5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
ZSWIM3Q96MP5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ZSWIM3Q96MP5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
ZSWIM3Q96MP5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZSWIM3Q96MP5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZSWIM3Q96MP5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
ZSWIM3Q96MP5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.5■■□□□ 1.67
ZSWIM3Q96MP5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ZSWIM3Q96MP5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.5■■□□□ 1.67
ZSWIM3Q96MP5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZSWIM3Q96MP5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.49■■□□□ 1.67
ZSWIM3Q96MP5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.49■■□□□ 1.67
ZSWIM3Q96MP5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZSWIM3Q96MP5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZSWIM3Q96MP5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.48■■□□□ 1.67
ZSWIM3Q96MP5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZSWIM3Q96MP5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.48■■□□□ 1.67
ZSWIM3Q96MP5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
ZSWIM3Q96MP5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZSWIM3Q96MP5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZSWIM3Q96MP5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms