Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 SEPT9-213ENST00000586433 569 ntTSL 413.4□□□□□ -0.262e-6■■□□□ 13.1
EIF3DO15371 SEPT9-238ENST00000591472 555 ntTSL 413.19□□□□□ -0.32e-6■■□□□ 13.1
EIF3DO15371 SEPT9-234ENST00000590938 611 ntTSL 411.15□□□□□ -0.622e-6■■□□□ 13.1
EIF3DO15371 ACVR2B-203ENST00000465020 1666 ntTSL 219.95■□□□□ 0.781e-6■■□□□ 13.1
EIF3DO15371 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.641e-6■■□□□ 13.1
EIF3DO15371 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.532e-6■■□□□ 13.1
EIF3DO15371 PRPSAP1-205ENST00000442767 908 ntTSL 525.02■■□□□ 1.61e-6■■□□□ 13.1
EIF3DO15371 PRPSAP1-202ENST00000423915 549 ntTSL 417.81■□□□□ 0.441e-6■■□□□ 13.1
EIF3DO15371 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.51■■□□□ 1.032e-11■■□□□ 13.1
EIF3DO15371 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.46■□□□□ 0.872e-11■■□□□ 13.1
EIF3DO15371 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.872e-11■■□□□ 13.1
EIF3DO15371 NME1-210ENST00000512768 1056 ntTSL 1 (best)19.75■□□□□ 0.752e-11■■□□□ 13.1
EIF3DO15371 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.432e-11■■□□□ 13.1
EIF3DO15371 NME1-206ENST00000475573 781 ntTSL 315.95■□□□□ 0.142e-11■■□□□ 13.1
EIF3DO15371 NME1-208ENST00000487481 987 ntTSL 215.95■□□□□ 0.142e-11■■□□□ 13.1
EIF3DO15371 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.12e-11■■□□□ 13.1
EIF3DO15371 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.22■□□□□ 0.032e-11■■□□□ 13.1
EIF3DO15371 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC14.4□□□□□ -0.12e-11■■□□□ 13.1
EIF3DO15371 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.751e-6■■□□□ 13.1
EIF3DO15371 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.751e-6■■□□□ 13.1
EIF3DO15371 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.51■■□□□ 1.192e-9■■□□□ 13
EIF3DO15371 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.96■■□□□ 1.112e-9■■□□□ 13
EIF3DO15371 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.172e-9■■□□□ 13
EIF3DO15371 CCT3-206ENST00000368262 2048 ntTSL 215.13■□□□□ 0.012e-9■■□□□ 13
EIF3DO15371 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.27□□□□□ -0.122e-9■■□□□ 13
EIF3DO15371 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.96□□□□□ -0.172e-9■■□□□ 13
EIF3DO15371 CCT3-203ENST00000368258 1885 ntTSL 213.12□□□□□ -0.312e-9■■□□□ 13
EIF3DO15371 CCT3-212ENST00000478640 583 ntTSL 212.1□□□□□ -0.472e-9■■□□□ 13
EIF3DO15371 CCT3-205ENST00000368261 863 ntTSL 512.07□□□□□ -0.482e-9■■□□□ 13
EIF3DO15371 BZW1-206ENST00000447069 557 ntTSL 411.41□□□□□ -0.582e-9■■□□□ 13
EIF3DO15371 NXN-208ENST00000575171 544 ntTSL 210.58□□□□□ -0.723e-6■■□□□ 13
EIF3DO15371 CCT3-208ENST00000415548 513 ntTSL 39.08□□□□□ -0.962e-9■■□□□ 13
EIF3DO15371 CCT3-215ENST00000496684 748 ntTSL 27.77□□□□□ -1.172e-9■■□□□ 13
EIF3DO15371 CCT3-216ENST00000533194 581 ntTSL 37.63□□□□□ -1.192e-9■■□□□ 13
EIF3DO15371 BZW1-205ENST00000419090 557 ntTSL 36.67□□□□□ -1.342e-9■■□□□ 13
EIF3DO15371 CCT3-207ENST00000413555 842 ntTSL 56.46□□□□□ -1.382e-9■■□□□ 13
EIF3DO15371 CCT3-214ENST00000490221 696 ntTSL 25.62□□□□□ -1.512e-9■■□□□ 13
EIF3DO15371 CCT3-209ENST00000446905 593 ntTSL 35.28□□□□□ -1.562e-9■■□□□ 13
EIF3DO15371 CCT3-210ENST00000463132 610 ntTSL 34.6□□□□□ -1.672e-9■■□□□ 13
EIF3DO15371 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC9.16□□□□□ -0.944e-8■■□□□ 13
EIF3DO15371 HERC2-202ENST00000562136 632 ntTSL 213.44□□□□□ -0.261e-6■■□□□ 13
EIF3DO15371 COL27A1-203ENST00000468565 1946 ntTSL 215.65■□□□□ 0.11e-7■■□□□ 13
EIF3DO15371 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.562e-12■■□□□ 13
EIF3DO15371 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.742e-12■■□□□ 13
EIF3DO15371 UBR4-213ENST00000483922 543 ntTSL 513.6□□□□□ -0.231e-12■■□□□ 12.9
EIF3DO15371 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.562e-6■■□□□ 12.9
EIF3DO15371 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.392e-6■■□□□ 12.9
EIF3DO15371 HERC2-208ENST00000566635 2114 ntTSL 1 (best)19.52■□□□□ 0.721e-6■■□□□ 12.9
EIF3DO15371 MALRD1-206ENST00000492202 557 ntTSL 44.07□□□□□ -1.762e-6■■□□□ 12.9
EIF3DO15371 BIRC6-209ENST00000471232 4226 ntTSL 27□□□□□ -1.291e-6■■□□□ 12.9
EIF3DO15371 SUZ12P1-203ENST00000578195 985 ntBASIC29.37■■■□□ 2.292e-6■■□□□ 12.9
EIF3DO15371 C1orf35-206ENST00000491293 854 ntTSL 226.8■■□□□ 1.882e-6■■□□□ 12.9
EIF3DO15371 SUZ12P1-201ENST00000497969 886 ntTSL 1 (best)26.48■■□□□ 1.832e-6■■□□□ 12.9
EIF3DO15371 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.672e-6■■□□□ 12.9
EIF3DO15371 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.612e-6■■□□□ 12.9
EIF3DO15371 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.482e-6■■□□□ 12.9
EIF3DO15371 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.472e-6■■□□□ 12.9
EIF3DO15371 C1orf35-202ENST00000465199 588 ntTSL 524.1■■□□□ 1.452e-6■■□□□ 12.9
EIF3DO15371 NEU4-215ENST00000488997 541 ntTSL 423.98■■□□□ 1.432e-6■■□□□ 12.9
EIF3DO15371 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.342e-6■■□□□ 12.9
EIF3DO15371 NEU4-212ENST00000435894 484 ntTSL 423.39■■□□□ 1.332e-6■■□□□ 12.9
EIF3DO15371 NEU4-214ENST00000476542 536 ntTSL 223.39■■□□□ 1.332e-6■■□□□ 12.9
EIF3DO15371 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.332e-6■■□□□ 12.9
EIF3DO15371 NEU4-211ENST00000435855 2281 ntTSL 223.35■■□□□ 1.332e-6■■□□□ 12.9
EIF3DO15371 C1orf35-203ENST00000469781 2256 ntTSL 223.04■■□□□ 1.282e-6■■□□□ 12.9
EIF3DO15371 SUZ12P1-204ENST00000579526 563 ntTSL 222.95■■□□□ 1.262e-6■■□□□ 12.9
EIF3DO15371 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.7■■□□□ 1.222e-6■■□□□ 12.9
EIF3DO15371 C1orf35-205ENST00000485896 1429 ntTSL 222.65■■□□□ 1.222e-6■■□□□ 12.9
EIF3DO15371 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.172e-6■■□□□ 12.9
EIF3DO15371 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.68■■□□□ 1.062e-6■■□□□ 12.9
EIF3DO15371 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.042e-6■■□□□ 12.9
EIF3DO15371 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 12e-6■■□□□ 12.9
EIF3DO15371 NEU4-217ENST00000618597 3013 ntTSL 221.02■□□□□ 0.962e-6■■□□□ 12.9
EIF3DO15371 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.951e-14■■□□□ 12.9
EIF3DO15371 NEU4-216ENST00000494678 491 ntTSL 420.88■□□□□ 0.932e-6■■□□□ 12.9
EIF3DO15371 NEU4-207ENST00000420288 845 ntTSL 320.76■□□□□ 0.912e-6■■□□□ 12.9
EIF3DO15371 SRSF2-201ENST00000358156 572 ntTSL 420.31■□□□□ 0.841e-14■■□□□ 12.9
EIF3DO15371 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.7■□□□□ 0.742e-6■■□□□ 12.9
EIF3DO15371 NEU4-206ENST00000415936 860 ntTSL 319.42■□□□□ 0.72e-6■■□□□ 12.9
EIF3DO15371 NEU4-208ENST00000423583 753 ntTSL 519.19■□□□□ 0.662e-6■■□□□ 12.9
EIF3DO15371 SRSF2-207ENST00000583836 561 ntTSL 518.96■□□□□ 0.631e-14■■□□□ 12.9
EIF3DO15371 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.55■□□□□ 0.561e-14■■□□□ 12.9
EIF3DO15371 NEU4-213ENST00000435934 451 ntTSL 418.15■□□□□ 0.52e-6■■□□□ 12.9
EIF3DO15371 TMEM43-202ENST00000432444 908 ntTSL 317.58■□□□□ 0.42e-6■■□□□ 12.9
EIF3DO15371 SRSF2-204ENST00000452355 1357 ntTSL 517.26■□□□□ 0.351e-14■■□□□ 12.9
EIF3DO15371 NEU4-209ENST00000426032 676 ntTSL 317.2■□□□□ 0.342e-6■■□□□ 12.9
EIF3DO15371 SRSF2-208ENST00000585202 1359 ntTSL 316.43■□□□□ 0.221e-14■■□□□ 12.9
EIF3DO15371 SLC19A1-203ENST00000417954 3572 ntTSL 1 (best)15.55■□□□□ 0.082e-6■■□□□ 12.9
EIF3DO15371 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.072e-6■■□□□ 12.9
EIF3DO15371 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.042e-6■■□□□ 12.9
EIF3DO15371 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.021e-14■■□□□ 12.9
EIF3DO15371 C1orf35-204ENST00000472617 3554 ntTSL 214.86□□□□□ -0.032e-6■■□□□ 12.9
EIF3DO15371 CAD-209ENST00000487239 748 ntTSL 314.85□□□□□ -0.032e-6■■□□□ 12.9
EIF3DO15371 RTEL1-206ENST00000425905 664 ntTSL 214.49□□□□□ -0.092e-6■■□□□ 12.9
EIF3DO15371 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.112e-6■■□□□ 12.9
EIF3DO15371 CAD-210ENST00000491461 366 ntTSL 314.24□□□□□ -0.132e-6■■□□□ 12.9
EIF3DO15371 FLNA-206ENST00000420627 8225 ntTSL 513.97□□□□□ -0.172e-6■■□□□ 12.9
EIF3DO15371 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.212e-6■■□□□ 12.9
EIF3DO15371 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.272e-6■■□□□ 12.9
EIF3DO15371 CAD-204ENST00000456311 837 ntTSL 513.15□□□□□ -0.32e-6■■□□□ 12.9
Retrieved 100 of 4,069 protein–RNA pairs in 285.3 ms