RNA–Protein interactions for RNA: ENST00000463132.5

CCT3-210, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 610 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-210ENST00000463132 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
CCT3-210ENST00000463132 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
CCT3-210ENST00000463132 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
CCT3-210ENST00000463132 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
CCT3-210ENST00000463132 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
CCT3-210ENST00000463132 FOXD1Q16676 465 aa18.37■□□□□ 0.53
CCT3-210ENST00000463132 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
CCT3-210ENST00000463132 ADRA2BP18089 450 aa17.68■□□□□ 0.42
CCT3-210ENST00000463132 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
CCT3-210ENST00000463132 MSH5O43196 834 aa16.92■□□□□ 0.3
CCT3-210ENST00000463132 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
CCT3-210ENST00000463132 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
CCT3-210ENST00000463132 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
CCT3-210ENST00000463132 KCNA4P22459 653 aa15.96■□□□□ 0.15
CCT3-210ENST00000463132 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
CCT3-210ENST00000463132 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
CCT3-210ENST00000463132 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
CCT3-210ENST00000463132 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
CCT3-210ENST00000463132 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
CCT3-210ENST00000463132 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
CCT3-210ENST00000463132 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
CCT3-210ENST00000463132 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
CCT3-210ENST00000463132 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
CCT3-210ENST00000463132 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
CCT3-210ENST00000463132 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
CCT3-210ENST00000463132 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
CCT3-210ENST00000463132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.051e-10■■□□□ 12.6
CCT3-210ENST00000463132 ZBTB22O15209 634 aa14.69□□□□□ -0.06
CCT3-210ENST00000463132 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
CCT3-210ENST00000463132 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
CCT3-210ENST00000463132 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
CCT3-210ENST00000463132 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
CCT3-210ENST00000463132 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
CCT3-210ENST00000463132 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
CCT3-210ENST00000463132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
CCT3-210ENST00000463132 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
CCT3-210ENST00000463132 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
CCT3-210ENST00000463132 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
CCT3-210ENST00000463132 APLP2Q06481 763 aa14.17□□□□□ -0.14
CCT3-210ENST00000463132 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
CCT3-210ENST00000463132 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
CCT3-210ENST00000463132 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
CCT3-210ENST00000463132 CAPN15O75808 1086 aa14.04□□□□□ -0.16
CCT3-210ENST00000463132 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
CCT3-210ENST00000463132 ZNF219Q9P2Y4 722 aaPredicted RBP13.97□□□□□ -0.17
CCT3-210ENST00000463132 DSG3P32926 999 aa13.82□□□□□ -0.2
CCT3-210ENST00000463132 ABCB7O75027 752 aa13.77□□□□□ -0.21
CCT3-210ENST00000463132 POLA2Q14181 598 aa13.77□□□□□ -0.21
CCT3-210ENST00000463132 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
CCT3-210ENST00000463132 FBLN2P98095 1184 aa13.48□□□□□ -0.25
CCT3-210ENST00000463132 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
CCT3-210ENST00000463132 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
CCT3-210ENST00000463132 FKBP8Q14318 412 aa13.2□□□□□ -0.3
CCT3-210ENST00000463132 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
CCT3-210ENST00000463132 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
CCT3-210ENST00000463132 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
CCT3-210ENST00000463132 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
CCT3-210ENST00000463132 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
CCT3-210ENST00000463132 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
CCT3-210ENST00000463132 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
CCT3-210ENST00000463132 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
CCT3-210ENST00000463132 PROM2Q8N271 834 aa12.98□□□□□ -0.33
CCT3-210ENST00000463132 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCT3-210ENST00000463132 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
CCT3-210ENST00000463132 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
CCT3-210ENST00000463132 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
CCT3-210ENST00000463132 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
CCT3-210ENST00000463132 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
CCT3-210ENST00000463132 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
CCT3-210ENST00000463132 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
CCT3-210ENST00000463132 CHRDL2Q6WN34 429 aa12.6□□□□□ -0.39
CCT3-210ENST00000463132 VASPP50552 380 aaPredicted RBP12.56□□□□□ -0.4
CCT3-210ENST00000463132 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.415e-6■■□□□ 11.5
CCT3-210ENST00000463132 MIER1Q8N108 512 aa12.5□□□□□ -0.41
CCT3-210ENST00000463132 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
CCT3-210ENST00000463132 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
CCT3-210ENST00000463132 PIP4P2Q8N4L2 257 aa12.45□□□□□ -0.42
CCT3-210ENST00000463132 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
CCT3-210ENST00000463132 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
CCT3-210ENST00000463132 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
CCT3-210ENST00000463132 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
CCT3-210ENST00000463132 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
CCT3-210ENST00000463132 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
CCT3-210ENST00000463132 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
CCT3-210ENST00000463132 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
CCT3-210ENST00000463132 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
CCT3-210ENST00000463132 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
CCT3-210ENST00000463132 NUBP1P53384 320 aa12.19□□□□□ -0.46
CCT3-210ENST00000463132 POTEHQ6S545 545 aa12.19□□□□□ -0.46
CCT3-210ENST00000463132 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
CCT3-210ENST00000463132 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
CCT3-210ENST00000463132 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
CCT3-210ENST00000463132 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
CCT3-210ENST00000463132 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
CCT3-210ENST00000463132 GSE1Q14687 1217 aa12.05□□□□□ -0.48
CCT3-210ENST00000463132 AMER1Q5JTC6 1135 aaPredicted RBP12.05□□□□□ -0.48
CCT3-210ENST00000463132 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
CCT3-210ENST00000463132 HAX1O00165 279 aa12.04□□□□□ -0.48
CCT3-210ENST00000463132 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
CCT3-210ENST00000463132 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms