RNA–Protein interactions for RNA: ENST00000368261.7

CCT3-205, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 5

Gene CCT3, Length 863 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-205ENST00000368261 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.69
CCT3-205ENST00000368261 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
CCT3-205ENST00000368261 ZCCHC6Q5VYS8 1495 aaKnown RBP21.49■■□□□ 1.03
CCT3-205ENST00000368261 ABCC9O60706 1549 aa21.27■■□□□ 1
CCT3-205ENST00000368261 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
CCT3-205ENST00000368261 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
CCT3-205ENST00000368261 NACADO15069 1562 aa20.9■□□□□ 0.94
CCT3-205ENST00000368261 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
CCT3-205ENST00000368261 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
CCT3-205ENST00000368261 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
CCT3-205ENST00000368261 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
CCT3-205ENST00000368261 UNC13AQ9UPW8 1703 aa20.52■□□□□ 0.88
CCT3-205ENST00000368261 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
CCT3-205ENST00000368261 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCT3-205ENST00000368261 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
CCT3-205ENST00000368261 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
CCT3-205ENST00000368261 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
CCT3-205ENST00000368261 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
CCT3-205ENST00000368261 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
CCT3-205ENST00000368261 WIZO95785 1651 aa19.62■□□□□ 0.73
CCT3-205ENST00000368261 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
CCT3-205ENST00000368261 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
CCT3-205ENST00000368261 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
CCT3-205ENST00000368261 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
CCT3-205ENST00000368261 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
CCT3-205ENST00000368261 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
CCT3-205ENST00000368261 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.69
CCT3-205ENST00000368261 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
CCT3-205ENST00000368261 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
CCT3-205ENST00000368261 BAZ1BQ9UIG0 1483 aaKnown RBP19.23■□□□□ 0.67
CCT3-205ENST00000368261 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
CCT3-205ENST00000368261 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
CCT3-205ENST00000368261 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
CCT3-205ENST00000368261 CFTRP13569 1480 aa18.79■□□□□ 0.6
CCT3-205ENST00000368261 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
CCT3-205ENST00000368261 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
CCT3-205ENST00000368261 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
CCT3-205ENST00000368261 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
CCT3-205ENST00000368261 NESP48681 1621 aa18.67■□□□□ 0.58
CCT3-205ENST00000368261 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
CCT3-205ENST00000368261 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
CCT3-205ENST00000368261 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
CCT3-205ENST00000368261 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
CCT3-205ENST00000368261 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.55
CCT3-205ENST00000368261 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
CCT3-205ENST00000368261 CUX1P39880 1505 aa18.5■□□□□ 0.55
CCT3-205ENST00000368261 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
CCT3-205ENST00000368261 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
CCT3-205ENST00000368261 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
CCT3-205ENST00000368261 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
CCT3-205ENST00000368261 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
CCT3-205ENST00000368261 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
CCT3-205ENST00000368261 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
CCT3-205ENST00000368261 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
CCT3-205ENST00000368261 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
CCT3-205ENST00000368261 SOGA1O94964 1423 aa18.25■□□□□ 0.51
CCT3-205ENST00000368261 WDR62O43379 1518 aa18.25■□□□□ 0.51
CCT3-205ENST00000368261 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
CCT3-205ENST00000368261 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
CCT3-205ENST00000368261 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
CCT3-205ENST00000368261 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
CCT3-205ENST00000368261 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
CCT3-205ENST00000368261 EEA1Q15075 1411 aa18.15■□□□□ 0.5
CCT3-205ENST00000368261 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.5
CCT3-205ENST00000368261 ABCA10Q8WWZ4 1543 aa18.14■□□□□ 0.49
CCT3-205ENST00000368261 CUX2O14529 1486 aa18.13■□□□□ 0.49
CCT3-205ENST00000368261 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
CCT3-205ENST00000368261 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
CCT3-205ENST00000368261 KIF27Q86VH2 1401 aa18.05■□□□□ 0.48
CCT3-205ENST00000368261 KIF21BO75037 1637 aa18.05■□□□□ 0.48
CCT3-205ENST00000368261 LOC105371045A0A1W2PR82 267 aa18■□□□□ 0.47
CCT3-205ENST00000368261 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
CCT3-205ENST00000368261 IFT140Q96RY7 1462 aa18■□□□□ 0.47
CCT3-205ENST00000368261 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
CCT3-205ENST00000368261 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
CCT3-205ENST00000368261 IGF1RP08069 1367 aa17.94■□□□□ 0.46
CCT3-205ENST00000368261 ZNF608Q9ULD9 1512 aaPredicted RBP17.94■□□□□ 0.46
CCT3-205ENST00000368261 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
CCT3-205ENST00000368261 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
CCT3-205ENST00000368261 GAPVD1Q14C86 1478 aa17.92■□□□□ 0.46
CCT3-205ENST00000368261 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
CCT3-205ENST00000368261 CUL7Q14999 1698 aa17.91■□□□□ 0.46
CCT3-205ENST00000368261 RAPGEF2Q9Y4G8 1499 aa17.91■□□□□ 0.46
CCT3-205ENST00000368261 GOLGA3Q08378 1498 aa17.9■□□□□ 0.46
CCT3-205ENST00000368261 AQRO60306 1485 aaKnown RBP eCLIP17.87■□□□□ 0.452e-7■■■■■ 35.6
CCT3-205ENST00000368261 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
CCT3-205ENST00000368261 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
CCT3-205ENST00000368261 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
CCT3-205ENST00000368261 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
CCT3-205ENST00000368261 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
CCT3-205ENST00000368261 SNAPC4Q5SXM2 1469 aa17.74■□□□□ 0.43
CCT3-205ENST00000368261 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
CCT3-205ENST00000368261 FHAD1B1AJZ9 1412 aa17.72■□□□□ 0.43
CCT3-205ENST00000368261 MAGI1Q96QZ7 1491 aaPredicted RBP17.71■□□□□ 0.43
CCT3-205ENST00000368261 CEP162Q5TB80 1403 aa17.69■□□□□ 0.42
CCT3-205ENST00000368261 UBTFP17480 764 aaKnown RBP17.65■□□□□ 0.42
CCT3-205ENST00000368261 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
CCT3-205ENST00000368261 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
CCT3-205ENST00000368261 CHD1O14646 1710 aa17.61■□□□□ 0.41
CCT3-205ENST00000368261 CEP170Q5SW79 1584 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms