RNA–Protein interactions for RNA: ENST00000487239.5

CAD-209, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 3

Gene CAD, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-209ENST00000487239 NISCHQ9Y2I1 1504 aa34.51■■■■□ 3.12
CAD-209ENST00000487239 ABCC9O60706 1549 aa31.01■■■□□ 2.55
CAD-209ENST00000487239 CCDC180Q9P1Z9 1646 aa30.78■■■□□ 2.52
CAD-209ENST00000487239 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
CAD-209ENST00000487239 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
CAD-209ENST00000487239 NACADO15069 1562 aa29.21■■■□□ 2.27
CAD-209ENST00000487239 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
CAD-209ENST00000487239 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
CAD-209ENST00000487239 MYO15BQ96JP2 1530 aa28.78■■■□□ 2.2
CAD-209ENST00000487239 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
CAD-209ENST00000487239 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
CAD-209ENST00000487239 BICRAQ9NZM4 1560 aa28.52■■■□□ 2.16
CAD-209ENST00000487239 DCAF1Q9Y4B6 1507 aa28.43■■■□□ 2.14
CAD-209ENST00000487239 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
CAD-209ENST00000487239 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
CAD-209ENST00000487239 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
CAD-209ENST00000487239 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
CAD-209ENST00000487239 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
CAD-209ENST00000487239 NCAPD3P42695 1498 aa27.03■■□□□ 1.92
CAD-209ENST00000487239 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
CAD-209ENST00000487239 SMARCA4P51532 1647 aa26.86■■□□□ 1.89
CAD-209ENST00000487239 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
CAD-209ENST00000487239 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
CAD-209ENST00000487239 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
CAD-209ENST00000487239 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
CAD-209ENST00000487239 BAZ1BQ9UIG0 1483 aaKnown RBP26.72■■□□□ 1.87
CAD-209ENST00000487239 DNAJC5Q9H3Z4 198 aa26.7■■□□□ 1.86
CAD-209ENST00000487239 CUX2O14529 1486 aa26.62■■□□□ 1.85
CAD-209ENST00000487239 NESP48681 1621 aa26.62■■□□□ 1.85
CAD-209ENST00000487239 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
CAD-209ENST00000487239 PEG3Q9GZU2 1588 aa26.56■■□□□ 1.84
CAD-209ENST00000487239 LAMC3Q9Y6N6 1575 aa26.34■■□□□ 1.81
CAD-209ENST00000487239 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
CAD-209ENST00000487239 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
CAD-209ENST00000487239 WIZO95785 1651 aa26.24■■□□□ 1.79
CAD-209ENST00000487239 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.79
CAD-209ENST00000487239 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
CAD-209ENST00000487239 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
CAD-209ENST00000487239 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
CAD-209ENST00000487239 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
CAD-209ENST00000487239 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
CAD-209ENST00000487239 CFTRP13569 1480 aa25.92■■□□□ 1.74
CAD-209ENST00000487239 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
CAD-209ENST00000487239 WDR62O43379 1518 aa25.91■■□□□ 1.74
CAD-209ENST00000487239 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
CAD-209ENST00000487239 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
CAD-209ENST00000487239 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
CAD-209ENST00000487239 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
CAD-209ENST00000487239 IFT140Q96RY7 1462 aa25.43■■□□□ 1.66
CAD-209ENST00000487239 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
CAD-209ENST00000487239 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
CAD-209ENST00000487239 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
CAD-209ENST00000487239 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
CAD-209ENST00000487239 DNMBPQ6XZF7 1577 aa25.28■■□□□ 1.64
CAD-209ENST00000487239 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.63
CAD-209ENST00000487239 FBLN2P98095 1184 aa25.18■■□□□ 1.62
CAD-209ENST00000487239 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
CAD-209ENST00000487239 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
CAD-209ENST00000487239 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
CAD-209ENST00000487239 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.61
CAD-209ENST00000487239 SOGA1O94964 1423 aa25.13■■□□□ 1.61
CAD-209ENST00000487239 TDRD9Q8NDG6 1382 aaKnown RBP25.12■■□□□ 1.61
CAD-209ENST00000487239 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
CAD-209ENST00000487239 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
CAD-209ENST00000487239 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
CAD-209ENST00000487239 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
CAD-209ENST00000487239 ARHGEF11O15085 1522 aa25.03■■□□□ 1.6
CAD-209ENST00000487239 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
CAD-209ENST00000487239 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
CAD-209ENST00000487239 CUX1P39880 1505 aa24.98■■□□□ 1.59
CAD-209ENST00000487239 CHMP7Q8WUX9 453 aaPredicted RBP24.96■■□□□ 1.59
CAD-209ENST00000487239 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
CAD-209ENST00000487239 CHD1O14646 1710 aa24.91■■□□□ 1.58
CAD-209ENST00000487239 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
CAD-209ENST00000487239 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
CAD-209ENST00000487239 WDR97A6NE52 1622 aa24.81■■□□□ 1.56
CAD-209ENST00000487239 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
CAD-209ENST00000487239 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
CAD-209ENST00000487239 TRHP20396 242 aaPredicted RBP24.77■■□□□ 1.56
CAD-209ENST00000487239 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
CAD-209ENST00000487239 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
CAD-209ENST00000487239 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
CAD-209ENST00000487239 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
CAD-209ENST00000487239 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
CAD-209ENST00000487239 ABCA5Q8WWZ7 1642 aa24.6■■□□□ 1.53
CAD-209ENST00000487239 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
CAD-209ENST00000487239 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
CAD-209ENST00000487239 GRIN2AQ12879 1464 aa24.52■■□□□ 1.52
CAD-209ENST00000487239 BIVM-ERCC5R4GMW8 1640 aa24.49■■□□□ 1.51
CAD-209ENST00000487239 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
CAD-209ENST00000487239 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
CAD-209ENST00000487239 NUP160Q12769 1436 aa24.43■■□□□ 1.5
CAD-209ENST00000487239 ERICH3Q5RHP9 1530 aa24.39■■□□□ 1.49
CAD-209ENST00000487239 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
CAD-209ENST00000487239 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
CAD-209ENST00000487239 JPH4Q96JJ6 628 aa24.31■■□□□ 1.48
CAD-209ENST00000487239 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
CAD-209ENST00000487239 IGF1RP08069 1367 aa24.21■■□□□ 1.47
CAD-209ENST00000487239 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
CAD-209ENST00000487239 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms