RNA–Protein interactions for RNA: ENST00000432444.1

TMEM43-202, Transcript of transmembrane protein 43, humanhuman

TSL 3

Gene TMEM43, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43-202ENST00000432444 NISCHQ9Y2I1 1504 aa39.85■■■■□ 3.97
TMEM43-202ENST00000432444 CCDC180Q9P1Z9 1646 aa35.5■■■■□ 3.27
TMEM43-202ENST00000432444 ABCC9O60706 1549 aa34.96■■■■□ 3.19
TMEM43-202ENST00000432444 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
TMEM43-202ENST00000432444 NACADO15069 1562 aa33.49■■■□□ 2.95
TMEM43-202ENST00000432444 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
TMEM43-202ENST00000432444 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
TMEM43-202ENST00000432444 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
TMEM43-202ENST00000432444 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
TMEM43-202ENST00000432444 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
TMEM43-202ENST00000432444 PABPN1Q86U42 306 aaKnown RBP eCLIP32.65■■■□□ 2.82
TMEM43-202ENST00000432444 BICRAQ9NZM4 1560 aa32.55■■■□□ 2.8
TMEM43-202ENST00000432444 DNAJC5BQ9UF47 199 aa32.42■■■□□ 2.78
TMEM43-202ENST00000432444 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
TMEM43-202ENST00000432444 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
TMEM43-202ENST00000432444 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
TMEM43-202ENST00000432444 CC2D2AQ9P2K1 1620 aa31.62■■■□□ 2.65
TMEM43-202ENST00000432444 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
TMEM43-202ENST00000432444 NCAPD3P42695 1498 aa30.95■■■□□ 2.55
TMEM43-202ENST00000432444 SMARCA4P51532 1647 aa30.93■■■□□ 2.54
TMEM43-202ENST00000432444 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.53
TMEM43-202ENST00000432444 BAZ1AQ9NRL2 1556 aaPredicted RBP30.88■■■□□ 2.53
TMEM43-202ENST00000432444 SMARCA2P51531 1590 aa30.81■■■□□ 2.52
TMEM43-202ENST00000432444 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
TMEM43-202ENST00000432444 PEG3Q9GZU2 1588 aa30.7■■■□□ 2.5
TMEM43-202ENST00000432444 MROH2BQ7Z745 1585 aa30.67■■■□□ 2.5
TMEM43-202ENST00000432444 BAZ1BQ9UIG0 1483 aaKnown RBP30.57■■■□□ 2.48
TMEM43-202ENST00000432444 WIZO95785 1651 aa30.28■■■□□ 2.44
TMEM43-202ENST00000432444 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
TMEM43-202ENST00000432444 NESP48681 1621 aa30.18■■■□□ 2.42
TMEM43-202ENST00000432444 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
TMEM43-202ENST00000432444 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
TMEM43-202ENST00000432444 CADPSQ9ULU8 1353 aa30.02■■■□□ 2.4
TMEM43-202ENST00000432444 CUX2O14529 1486 aa29.99■■■□□ 2.39
TMEM43-202ENST00000432444 TOP2AP11388 1531 aaKnown RBP29.98■■■□□ 2.39
TMEM43-202ENST00000432444 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
TMEM43-202ENST00000432444 CFTRP13569 1480 aa29.77■■■□□ 2.36
TMEM43-202ENST00000432444 THOC2Q8NI27 1593 aaKnown RBP29.77■■■□□ 2.36
TMEM43-202ENST00000432444 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.36
TMEM43-202ENST00000432444 CCDC88BA6NC98 1476 aa29.67■■■□□ 2.34
TMEM43-202ENST00000432444 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
TMEM43-202ENST00000432444 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
TMEM43-202ENST00000432444 CEP164Q9UPV0 1460 aa29.59■■■□□ 2.33
TMEM43-202ENST00000432444 WDR62O43379 1518 aa29.53■■■□□ 2.32
TMEM43-202ENST00000432444 DNAJC5Q9H3Z4 198 aa29.44■■■□□ 2.3
TMEM43-202ENST00000432444 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
TMEM43-202ENST00000432444 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
TMEM43-202ENST00000432444 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
TMEM43-202ENST00000432444 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
TMEM43-202ENST00000432444 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
TMEM43-202ENST00000432444 DNMBPQ6XZF7 1577 aa29.04■■■□□ 2.24
TMEM43-202ENST00000432444 IFT140Q96RY7 1462 aa29.02■■■□□ 2.24
TMEM43-202ENST00000432444 ZNF608Q9ULD9 1512 aaPredicted RBP28.86■■■□□ 2.21
TMEM43-202ENST00000432444 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
TMEM43-202ENST00000432444 TARBP1Q13395 1621 aaKnown RBP28.81■■■□□ 2.2
TMEM43-202ENST00000432444 CUX1P39880 1505 aa28.78■■■□□ 2.2
TMEM43-202ENST00000432444 OSCARQ8IYS5 282 aa28.75■■■□□ 2.19
TMEM43-202ENST00000432444 SOGA1O94964 1423 aa28.75■■■□□ 2.19
TMEM43-202ENST00000432444 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
TMEM43-202ENST00000432444 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
TMEM43-202ENST00000432444 EIF4G3O43432 1585 aaKnown RBP28.7■■■□□ 2.18
TMEM43-202ENST00000432444 AQRO60306 1485 aaKnown RBP eCLIP28.69■■■□□ 2.183e-6■■■■□ 21.7
TMEM43-202ENST00000432444 TDRD9Q8NDG6 1382 aaKnown RBP28.61■■■□□ 2.17
TMEM43-202ENST00000432444 WDR97A6NE52 1622 aa28.6■■■□□ 2.17
TMEM43-202ENST00000432444 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
TMEM43-202ENST00000432444 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
TMEM43-202ENST00000432444 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
TMEM43-202ENST00000432444 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
TMEM43-202ENST00000432444 GRIN2BQ13224 1484 aa28.44■■■□□ 2.14
TMEM43-202ENST00000432444 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
TMEM43-202ENST00000432444 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
TMEM43-202ENST00000432444 SNAPC4Q5SXM2 1469 aa28.39■■■□□ 2.13
TMEM43-202ENST00000432444 MAGI1Q96QZ7 1491 aaPredicted RBP28.39■■■□□ 2.13
TMEM43-202ENST00000432444 FBLN2P98095 1184 aa28.37■■■□□ 2.13
TMEM43-202ENST00000432444 CHD1O14646 1710 aa28.36■■■□□ 2.13
TMEM43-202ENST00000432444 ABCA5Q8WWZ7 1642 aa28.33■■■□□ 2.13
TMEM43-202ENST00000432444 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
TMEM43-202ENST00000432444 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
TMEM43-202ENST00000432444 PBRM1Q86U86 1689 aa28.26■■■□□ 2.11
TMEM43-202ENST00000432444 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
TMEM43-202ENST00000432444 RIMBP3CA6NJZ7 1639 aa28.2■■■□□ 2.1
TMEM43-202ENST00000432444 RIMBP3BA6NNM3 1639 aa28.2■■■□□ 2.1
TMEM43-202ENST00000432444 RIMBP3Q9UFD9 1639 aa28.2■■■□□ 2.1
TMEM43-202ENST00000432444 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
TMEM43-202ENST00000432444 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
TMEM43-202ENST00000432444 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
TMEM43-202ENST00000432444 FHAD1B1AJZ9 1412 aa28.09■■■□□ 2.09
TMEM43-202ENST00000432444 GRIN2AQ12879 1464 aa28.06■■■□□ 2.08
TMEM43-202ENST00000432444 ADAMTS12P58397 1594 aa28.06■■■□□ 2.08
TMEM43-202ENST00000432444 CYB5RLQ6IPT4 315 aa27.99■■■□□ 2.07
TMEM43-202ENST00000432444 NUP160Q12769 1436 aa27.98■■■□□ 2.07
TMEM43-202ENST00000432444 KIF27Q86VH2 1401 aa27.97■■■□□ 2.07
TMEM43-202ENST00000432444 ARAP1Q96P48 1450 aa27.95■■■□□ 2.06
TMEM43-202ENST00000432444 IGF1RP08069 1367 aa27.93■■■□□ 2.06
TMEM43-202ENST00000432444 CEP170Q5SW79 1584 aa27.89■■■□□ 2.05
TMEM43-202ENST00000432444 CUL7Q14999 1698 aa27.77■■■□□ 2.04
TMEM43-202ENST00000432444 SHROOM2Q13796 1616 aa27.76■■■□□ 2.03
TMEM43-202ENST00000432444 CARMIL1Q5VZK9 1371 aa27.73■■■□□ 2.03
TMEM43-202ENST00000432444 JPH4Q96JJ6 628 aa27.72■■■□□ 2.03
TMEM43-202ENST00000432444 ERCC6L2Q5T890 1561 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms