RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
NME1-209ENST00000511355 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
NME1-209ENST00000511355 ABCC9O60706 1549 aa27.72■■■□□ 2.03
NME1-209ENST00000511355 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
NME1-209ENST00000511355 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
NME1-209ENST00000511355 NACADO15069 1562 aa26.37■■□□□ 1.81
NME1-209ENST00000511355 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
NME1-209ENST00000511355 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
NME1-209ENST00000511355 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
NME1-209ENST00000511355 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
NME1-209ENST00000511355 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
NME1-209ENST00000511355 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
NME1-209ENST00000511355 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.7
NME1-209ENST00000511355 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
NME1-209ENST00000511355 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
NME1-209ENST00000511355 CC2D2AQ9P2K1 1620 aa25.06■■□□□ 1.6
NME1-209ENST00000511355 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
NME1-209ENST00000511355 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
NME1-209ENST00000511355 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
NME1-209ENST00000511355 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
NME1-209ENST00000511355 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
NME1-209ENST00000511355 RSF1Q96T23 1441 aaPredicted RBP24.33■■□□□ 1.48
NME1-209ENST00000511355 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
NME1-209ENST00000511355 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
NME1-209ENST00000511355 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
NME1-209ENST00000511355 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
NME1-209ENST00000511355 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
NME1-209ENST00000511355 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.46
NME1-209ENST00000511355 WIZO95785 1651 aa24.14■■□□□ 1.46
NME1-209ENST00000511355 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
NME1-209ENST00000511355 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
NME1-209ENST00000511355 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
NME1-209ENST00000511355 CUX2O14529 1486 aa23.94■■□□□ 1.42
NME1-209ENST00000511355 NESP48681 1621 aa23.8■■□□□ 1.4
NME1-209ENST00000511355 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
NME1-209ENST00000511355 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
NME1-209ENST00000511355 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
NME1-209ENST00000511355 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
NME1-209ENST00000511355 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
NME1-209ENST00000511355 THOC2Q8NI27 1593 aaKnown RBP23.58■■□□□ 1.37
NME1-209ENST00000511355 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
NME1-209ENST00000511355 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
NME1-209ENST00000511355 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
NME1-209ENST00000511355 CFTRP13569 1480 aa23.32■■□□□ 1.32
NME1-209ENST00000511355 WDR62O43379 1518 aa23.32■■□□□ 1.32
NME1-209ENST00000511355 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
NME1-209ENST00000511355 PRDM2Q13029 1718 aa23.25■■□□□ 1.31
NME1-209ENST00000511355 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
NME1-209ENST00000511355 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
NME1-209ENST00000511355 ABCC8Q09428 1581 aa22.98■■□□□ 1.27
NME1-209ENST00000511355 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
NME1-209ENST00000511355 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
NME1-209ENST00000511355 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
NME1-209ENST00000511355 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
NME1-209ENST00000511355 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
NME1-209ENST00000511355 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
NME1-209ENST00000511355 TOP2BQ02880 1626 aa22.83■■□□□ 1.25
NME1-209ENST00000511355 CUX1P39880 1505 aa22.83■■□□□ 1.25
NME1-209ENST00000511355 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
NME1-209ENST00000511355 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
NME1-209ENST00000511355 ZNF608Q9ULD9 1512 aaPredicted RBP22.73■■□□□ 1.23
NME1-209ENST00000511355 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
NME1-209ENST00000511355 HRCP23327 699 aa22.64■■□□□ 1.22
NME1-209ENST00000511355 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.22
NME1-209ENST00000511355 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
NME1-209ENST00000511355 POLA1P09884 1462 aaPredicted RBP22.62■■□□□ 1.21
NME1-209ENST00000511355 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.28e-7■■■□□ 16.8
NME1-209ENST00000511355 SOGA1O94964 1423 aa22.56■■□□□ 1.2
NME1-209ENST00000511355 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
NME1-209ENST00000511355 RAD54L2Q9Y4B4 1467 aa22.5■■□□□ 1.19
NME1-209ENST00000511355 RIMBP3CA6NJZ7 1639 aa22.48■■□□□ 1.19
NME1-209ENST00000511355 RIMBP3BA6NNM3 1639 aa22.48■■□□□ 1.19
NME1-209ENST00000511355 RIMBP3Q9UFD9 1639 aa22.48■■□□□ 1.19
NME1-209ENST00000511355 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
NME1-209ENST00000511355 CHD1O14646 1710 aa22.46■■□□□ 1.19
NME1-209ENST00000511355 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
NME1-209ENST00000511355 EEA1Q15075 1411 aa22.44■■□□□ 1.18
NME1-209ENST00000511355 FBLN2P98095 1184 aa22.43■■□□□ 1.18
NME1-209ENST00000511355 ARHGEF11O15085 1522 aa22.42■■□□□ 1.18
NME1-209ENST00000511355 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
NME1-209ENST00000511355 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
NME1-209ENST00000511355 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
NME1-209ENST00000511355 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
NME1-209ENST00000511355 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
NME1-209ENST00000511355 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
NME1-209ENST00000511355 PCGF6Q9BYE7 350 aa22.34■■□□□ 1.17
NME1-209ENST00000511355 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.17
NME1-209ENST00000511355 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
NME1-209ENST00000511355 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
NME1-209ENST00000511355 TRIM26Q12899 539 aaPredicted RBP22.27■■□□□ 1.16
NME1-209ENST00000511355 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
NME1-209ENST00000511355 FAM9AQ8IZU1 332 aaPredicted RBP22.27■■□□□ 1.16
NME1-209ENST00000511355 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
NME1-209ENST00000511355 PBRM1Q86U86 1689 aa22.24■■□□□ 1.15
NME1-209ENST00000511355 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
NME1-209ENST00000511355 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
NME1-209ENST00000511355 CLASP1Q7Z460 1538 aa22.22■■□□□ 1.15
NME1-209ENST00000511355 ARAP1Q96P48 1450 aa22.2■■□□□ 1.14
NME1-209ENST00000511355 IGF1RP08069 1367 aa22.18■■□□□ 1.14
NME1-209ENST00000511355 CUL7Q14999 1698 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms