Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.89■□□□□ 0.29
GABRA4P48169 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.89■□□□□ 0.29
GABRA4P48169 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GABRA4P48169 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 PMPCAP1-201ENST00000508114 1576 ntBASIC16.89■□□□□ 0.29
GABRA4P48169 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.89■□□□□ 0.29
GABRA4P48169 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GABRA4P48169 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.88■□□□□ 0.29
GABRA4P48169 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GABRA4P48169 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.88■□□□□ 0.29
GABRA4P48169 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.88■□□□□ 0.29
GABRA4P48169 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.88■□□□□ 0.29
GABRA4P48169 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GABRA4P48169 KRT18P67-201ENST00000432816 1264 ntBASIC16.88■□□□□ 0.29
GABRA4P48169 AC018712.1-201ENST00000455767 687 ntBASIC16.88■□□□□ 0.29
GABRA4P48169 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.88■□□□□ 0.29
GABRA4P48169 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
GABRA4P48169 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.88■□□□□ 0.29
GABRA4P48169 AL662844.1-201ENST00000546340 181 ntBASIC16.88■□□□□ 0.29
GABRA4P48169 SART3-203ENST00000546611 1184 ntBASIC16.88■□□□□ 0.29
GABRA4P48169 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.88■□□□□ 0.29
GABRA4P48169 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.88■□□□□ 0.29
GABRA4P48169 AC148477.8-201ENST00000624298 468 ntBASIC16.88■□□□□ 0.29
GABRA4P48169 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 HLA-A-201ENST00000376802 1334 ntBASIC16.88■□□□□ 0.29
GABRA4P48169 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.88■□□□□ 0.29
GABRA4P48169 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABRA4P48169 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.87■□□□□ 0.29
GABRA4P48169 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.87■□□□□ 0.29
GABRA4P48169 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GABRA4P48169 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.87■□□□□ 0.29
GABRA4P48169 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GABRA4P48169 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.87■□□□□ 0.29
GABRA4P48169 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GABRA4P48169 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.87■□□□□ 0.29
GABRA4P48169 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.87■□□□□ 0.29
GABRA4P48169 AC135050.7-201ENST00000624508 2218 ntBASIC16.87■□□□□ 0.29
GABRA4P48169 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.87■□□□□ 0.29
GABRA4P48169 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.87■□□□□ 0.29
GABRA4P48169 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.87■□□□□ 0.29
GABRA4P48169 AC103564.2-201ENST00000432853 1299 ntBASIC16.87■□□□□ 0.29
GABRA4P48169 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.87■□□□□ 0.29
GABRA4P48169 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.87■□□□□ 0.29
GABRA4P48169 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.87■□□□□ 0.29
GABRA4P48169 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 AC116407.2-201ENST00000613639 860 ntBASIC16.87■□□□□ 0.29
GABRA4P48169 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GABRA4P48169 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GABRA4P48169 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.87■□□□□ 0.29
GABRA4P48169 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.87■□□□□ 0.29
GABRA4P48169 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.87■□□□□ 0.29
GABRA4P48169 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.87■□□□□ 0.29
GABRA4P48169 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABRA4P48169 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms