RNA–Protein interactions for RNA: ENST00000357105.10

ATRIP-203, Transcript of ATR interacting protein, humanhuman

TSL 2 BASIC

Gene ATRIP, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-203ENST00000357105 NISCHQ9Y2I1 1504 aa40.02■■■■■ 4
ATRIP-203ENST00000357105 CCDC180Q9P1Z9 1646 aa34.71■■■■□ 3.15
ATRIP-203ENST00000357105 ZCCHC6Q5VYS8 1495 aaKnown RBP33.64■■■□□ 2.98
ATRIP-203ENST00000357105 DCAF8L2P0C7V8 631 aa33.13■■■□□ 2.89
ATRIP-203ENST00000357105 SHROOM4Q9ULL8 1493 aa33.05■■■□□ 2.88
ATRIP-203ENST00000357105 DCAF1Q9Y4B6 1507 aa33.03■■■□□ 2.88
ATRIP-203ENST00000357105 ABCC9O60706 1549 aa32.84■■■□□ 2.85
ATRIP-203ENST00000357105 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
ATRIP-203ENST00000357105 NACADO15069 1562 aa32.34■■■□□ 2.77
ATRIP-203ENST00000357105 SCRIBQ14160 1630 aa32.06■■■□□ 2.72
ATRIP-203ENST00000357105 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
ATRIP-203ENST00000357105 RB1CC1Q8TDY2 1594 aa32.02■■■□□ 2.72
ATRIP-203ENST00000357105 UNC13AQ9UPW8 1703 aa31.4■■■□□ 2.62
ATRIP-203ENST00000357105 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
ATRIP-203ENST00000357105 RSF1Q96T23 1441 aaPredicted RBP31.16■■■□□ 2.58
ATRIP-203ENST00000357105 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
ATRIP-203ENST00000357105 PABPN1Q86U42 306 aaKnown RBP eCLIP31.07■■■□□ 2.56
ATRIP-203ENST00000357105 MROH2BQ7Z745 1585 aa30.97■■■□□ 2.55
ATRIP-203ENST00000357105 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.54
ATRIP-203ENST00000357105 BAZ1AQ9NRL2 1556 aaPredicted RBP30.86■■■□□ 2.53
ATRIP-203ENST00000357105 SMARCA4P51532 1647 aa30.71■■■□□ 2.51
ATRIP-203ENST00000357105 WIZO95785 1651 aa30.7■■■□□ 2.51
ATRIP-203ENST00000357105 TOP2AP11388 1531 aaKnown RBP30.34■■■□□ 2.45
ATRIP-203ENST00000357105 PEG3Q9GZU2 1588 aa30.3■■■□□ 2.44
ATRIP-203ENST00000357105 ATAD2BQ9ULI0 1458 aa30.2■■■□□ 2.43
ATRIP-203ENST00000357105 EIF4G1Q04637 1599 aaKnown RBP30.15■■■□□ 2.42
ATRIP-203ENST00000357105 SMARCA2P51531 1590 aa30.13■■■□□ 2.41
ATRIP-203ENST00000357105 CCDC88BA6NC98 1476 aa30.1■■■□□ 2.41
ATRIP-203ENST00000357105 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
ATRIP-203ENST00000357105 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
ATRIP-203ENST00000357105 NCAPD3P42695 1498 aa29.9■■■□□ 2.38
ATRIP-203ENST00000357105 LOC105371045A0A1W2PR82 267 aa29.83■■■□□ 2.37
ATRIP-203ENST00000357105 HMGXB3Q12766 1538 aa29.82■■■□□ 2.36
ATRIP-203ENST00000357105 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
ATRIP-203ENST00000357105 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
ATRIP-203ENST00000357105 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
ATRIP-203ENST00000357105 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
ATRIP-203ENST00000357105 CFTRP13569 1480 aa29.29■■■□□ 2.28
ATRIP-203ENST00000357105 EHMT2Q96KQ7 1210 aa29.26■■■□□ 2.27
ATRIP-203ENST00000357105 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
ATRIP-203ENST00000357105 CADPSQ9ULU8 1353 aa29.16■■■□□ 2.26
ATRIP-203ENST00000357105 SOGA1O94964 1423 aa29.15■■■□□ 2.26
ATRIP-203ENST00000357105 DNAJC5BQ9UF47 199 aa29.05■■■□□ 2.24
ATRIP-203ENST00000357105 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
ATRIP-203ENST00000357105 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
ATRIP-203ENST00000357105 EEA1Q15075 1411 aa29.01■■■□□ 2.23
ATRIP-203ENST00000357105 PCGF6Q9BYE7 350 aa29.01■■■□□ 2.23
ATRIP-203ENST00000357105 TOP2BQ02880 1626 aa29■■■□□ 2.23
ATRIP-203ENST00000357105 CSRNP3Q8WYN3 585 aa28.94■■■□□ 2.22
ATRIP-203ENST00000357105 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
ATRIP-203ENST00000357105 CUX1P39880 1505 aa28.93■■■□□ 2.22
ATRIP-203ENST00000357105 NESP48681 1621 aa28.9■■■□□ 2.22
ATRIP-203ENST00000357105 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
ATRIP-203ENST00000357105 LAMC3Q9Y6N6 1575 aa28.81■■■□□ 2.2
ATRIP-203ENST00000357105 TRIM26Q12899 539 aaPredicted RBP28.76■■■□□ 2.19
ATRIP-203ENST00000357105 TNIKQ9UKE5 1360 aa28.73■■■□□ 2.19
ATRIP-203ENST00000357105 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
ATRIP-203ENST00000357105 UBTFP17480 764 aaKnown RBP28.68■■■□□ 2.18
ATRIP-203ENST00000357105 CEP162Q5TB80 1403 aa28.67■■■□□ 2.18
ATRIP-203ENST00000357105 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
ATRIP-203ENST00000357105 KIF21BO75037 1637 aa28.63■■■□□ 2.17
ATRIP-203ENST00000357105 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
ATRIP-203ENST00000357105 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
ATRIP-203ENST00000357105 DNMBPQ6XZF7 1577 aa28.56■■■□□ 2.16
ATRIP-203ENST00000357105 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
ATRIP-203ENST00000357105 KIF27Q86VH2 1401 aa28.53■■■□□ 2.16
ATRIP-203ENST00000357105 HRCP23327 699 aa28.52■■■□□ 2.16
ATRIP-203ENST00000357105 RAPGEF2Q9Y4G8 1499 aa28.51■■■□□ 2.15
ATRIP-203ENST00000357105 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
ATRIP-203ENST00000357105 KIF21AQ7Z4S6 1674 aa28.47■■■□□ 2.15
ATRIP-203ENST00000357105 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.14
ATRIP-203ENST00000357105 CUX2O14529 1486 aa28.44■■■□□ 2.14
ATRIP-203ENST00000357105 POLA1P09884 1462 aaPredicted RBP28.42■■■□□ 2.14
ATRIP-203ENST00000357105 PRXQ9BXM0 1461 aa28.4■■■□□ 2.14
ATRIP-203ENST00000357105 RAD54L2Q9Y4B4 1467 aa28.37■■■□□ 2.13
ATRIP-203ENST00000357105 ERICH3Q5RHP9 1530 aa28.34■■■□□ 2.13
ATRIP-203ENST00000357105 CLIP1P30622 1438 aa28.32■■■□□ 2.12
ATRIP-203ENST00000357105 ABCA10Q8WWZ4 1543 aa28.31■■■□□ 2.12
ATRIP-203ENST00000357105 IGF1RP08069 1367 aa28.31■■■□□ 2.12
ATRIP-203ENST00000357105 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
ATRIP-203ENST00000357105 RANGAP1P46060 587 aaPredicted RBP28.19■■■□□ 2.1
ATRIP-203ENST00000357105 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
ATRIP-203ENST00000357105 CARMIL1Q5VZK9 1371 aa28.15■■■□□ 2.1
ATRIP-203ENST00000357105 TTBK1Q5TCY1 1321 aaPredicted RBP28.12■■■□□ 2.09
ATRIP-203ENST00000357105 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
ATRIP-203ENST00000357105 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
ATRIP-203ENST00000357105 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
ATRIP-203ENST00000357105 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
ATRIP-203ENST00000357105 WDR62O43379 1518 aa28.07■■■□□ 2.08
ATRIP-203ENST00000357105 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
ATRIP-203ENST00000357105 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
ATRIP-203ENST00000357105 ARAP1Q96P48 1450 aa27.97■■■□□ 2.07
ATRIP-203ENST00000357105 CUL7Q14999 1698 aa27.96■■■□□ 2.07
ATRIP-203ENST00000357105 THOC2Q8NI27 1593 aaKnown RBP27.95■■■□□ 2.06
ATRIP-203ENST00000357105 IFT140Q96RY7 1462 aa27.91■■■□□ 2.06
ATRIP-203ENST00000357105 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.05
ATRIP-203ENST00000357105 APLP2Q06481 763 aa27.88■■■□□ 2.05
ATRIP-203ENST00000357105 ARHGAP35Q9NRY4 1499 aa27.87■■■□□ 2.05
ATRIP-203ENST00000357105 ZNF608Q9ULD9 1512 aaPredicted RBP27.83■■■□□ 2.05
ATRIP-203ENST00000357105 ZEB1P37275 1124 aaPredicted RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms