RNA–Protein interactions for RNA: ENST00000374946.7

TMEM235-201, Transcript of transmembrane protein 235, humanhuman

TSL 5 BASIC

Gene TMEM235, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-201ENST00000374946 NISCHQ9Y2I1 1504 aa38.39■■■■□ 3.74
TMEM235-201ENST00000374946 CCDC180Q9P1Z9 1646 aa32.78■■■□□ 2.84
TMEM235-201ENST00000374946 SHROOM4Q9ULL8 1493 aa32.75■■■□□ 2.83
TMEM235-201ENST00000374946 SUPT5HO00267 1087 aaKnown RBP32.46■■■□□ 2.79
TMEM235-201ENST00000374946 ZCCHC6Q5VYS8 1495 aaKnown RBP32.4■■■□□ 2.78
TMEM235-201ENST00000374946 HRCP23327 699 aa32.22■■■□□ 2.75
TMEM235-201ENST00000374946 MYO15BQ96JP2 1530 aa32.07■■■□□ 2.72
TMEM235-201ENST00000374946 DCAF8L2P0C7V8 631 aa31.91■■■□□ 2.7
TMEM235-201ENST00000374946 CHIC1Q5VXU3 224 aa31.89■■■□□ 2.7
TMEM235-201ENST00000374946 PCGF6Q9BYE7 350 aa31.72■■■□□ 2.67
TMEM235-201ENST00000374946 PPARGC1BQ86YN6 1023 aaKnown RBP31.5■■■□□ 2.63
TMEM235-201ENST00000374946 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
TMEM235-201ENST00000374946 LOC105371045A0A1W2PR82 267 aa31.04■■■□□ 2.56
TMEM235-201ENST00000374946 TRIM26Q12899 539 aaPredicted RBP30.88■■■□□ 2.53
TMEM235-201ENST00000374946 ABCC9O60706 1549 aa30.76■■■□□ 2.52
TMEM235-201ENST00000374946 SCRIBQ14160 1630 aa30.7■■■□□ 2.51
TMEM235-201ENST00000374946 ZEB1P37275 1124 aaPredicted RBP30.51■■■□□ 2.47
TMEM235-201ENST00000374946 PELP1Q8IZL8 1130 aaKnown RBP30.43■■■□□ 2.46
TMEM235-201ENST00000374946 NACADO15069 1562 aa30.39■■■□□ 2.46
TMEM235-201ENST00000374946 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
TMEM235-201ENST00000374946 SCAF1Q9H7N4 1312 aaKnown RBP30.2■■■□□ 2.43
TMEM235-201ENST00000374946 TRIM41Q8WV44 630 aa30.13■■■□□ 2.41
TMEM235-201ENST00000374946 CECR2Q9BXF3 1484 aa30.01■■■□□ 2.39
TMEM235-201ENST00000374946 FAM9AQ8IZU1 332 aaPredicted RBP29.98■■■□□ 2.39
TMEM235-201ENST00000374946 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
TMEM235-201ENST00000374946 MROH2BQ7Z745 1585 aa29.85■■■□□ 2.37
TMEM235-201ENST00000374946 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
TMEM235-201ENST00000374946 WIZO95785 1651 aa29.67■■■□□ 2.34
TMEM235-201ENST00000374946 ACIN1Q9UKV3 1341 aaKnown RBP29.63■■■□□ 2.33
TMEM235-201ENST00000374946 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
TMEM235-201ENST00000374946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.55■■■□□ 2.32
TMEM235-201ENST00000374946 NEUROD1Q13562 356 aa29.54■■■□□ 2.32
TMEM235-201ENST00000374946 CCER1Q8TC90 406 aaPredicted RBP29.5■■■□□ 2.31
TMEM235-201ENST00000374946 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
TMEM235-201ENST00000374946 DIEXFQ68CQ4 756 aaKnown RBP29.35■■■□□ 2.29
TMEM235-201ENST00000374946 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
TMEM235-201ENST00000374946 GTF3C3Q9Y5Q9 886 aa29.33■■■□□ 2.29
TMEM235-201ENST00000374946 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
TMEM235-201ENST00000374946 CENPBP07199 599 aaPredicted RBP29.31■■■□□ 2.28
TMEM235-201ENST00000374946 BICRAQ9NZM4 1560 aa29.25■■■□□ 2.27
TMEM235-201ENST00000374946 EIF4G1Q04637 1599 aaKnown RBP29.19■■■□□ 2.26
TMEM235-201ENST00000374946 TOP2AP11388 1531 aaKnown RBP29.16■■■□□ 2.26
TMEM235-201ENST00000374946 MYT1Q01538 1121 aa29.11■■■□□ 2.25
TMEM235-201ENST00000374946 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.25
TMEM235-201ENST00000374946 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
TMEM235-201ENST00000374946 SMARCA2P51531 1590 aa29.01■■■□□ 2.24
TMEM235-201ENST00000374946 TTBK1Q5TCY1 1321 aaPredicted RBP29.01■■■□□ 2.23
TMEM235-201ENST00000374946 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
TMEM235-201ENST00000374946 ZNF316A6NFI3 1004 aaPredicted RBP28.91■■■□□ 2.22
TMEM235-201ENST00000374946 ABCC8Q09428 1581 aa28.91■■■□□ 2.22
TMEM235-201ENST00000374946 TNIKQ9UKE5 1360 aa28.8■■■□□ 2.2
TMEM235-201ENST00000374946 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.2
TMEM235-201ENST00000374946 YTHDC1Q96MU7 727 aaKnown RBP28.74■■■□□ 2.19
TMEM235-201ENST00000374946 SOGA1O94964 1423 aa28.74■■■□□ 2.19
TMEM235-201ENST00000374946 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
TMEM235-201ENST00000374946 MIER1Q8N108 512 aa28.64■■■□□ 2.18
TMEM235-201ENST00000374946 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
TMEM235-201ENST00000374946 CSRNP3Q8WYN3 585 aa28.61■■■□□ 2.17
TMEM235-201ENST00000374946 EEA1Q15075 1411 aa28.61■■■□□ 2.17
TMEM235-201ENST00000374946 UBTFP17480 764 aaKnown RBP28.61■■■□□ 2.17
TMEM235-201ENST00000374946 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
TMEM235-201ENST00000374946 GOLGA3Q08378 1498 aa28.51■■■□□ 2.15
TMEM235-201ENST00000374946 HNRNPUL2Q1KMD3 747 aaKnown RBP28.45■■■□□ 2.15
TMEM235-201ENST00000374946 SYNJ1O43426 1573 aa28.31■■■□□ 2.12
TMEM235-201ENST00000374946 CEP164Q9UPV0 1460 aa28.25■■■□□ 2.11
TMEM235-201ENST00000374946 KIF21BO75037 1637 aa28.25■■■□□ 2.11
TMEM235-201ENST00000374946 CLIP1P30622 1438 aa28.23■■■□□ 2.11
TMEM235-201ENST00000374946 VPS8Q8N3P4 1428 aa28.2■■■□□ 2.1
TMEM235-201ENST00000374946 NCAPD3P42695 1498 aa28.16■■■□□ 2.1
TMEM235-201ENST00000374946 APLP2Q06481 763 aa28.11■■■□□ 2.09
TMEM235-201ENST00000374946 HMGXB3Q12766 1538 aa28.1■■■□□ 2.09
TMEM235-201ENST00000374946 CLSPNQ9HAW4 1339 aa28.09■■■□□ 2.09
TMEM235-201ENST00000374946 SUPT16HQ9Y5B9 1047 aaKnown RBP28.05■■■□□ 2.08
TMEM235-201ENST00000374946 RAPGEF2Q9Y4G8 1499 aa27.99■■■□□ 2.07
TMEM235-201ENST00000374946 DHX57Q6P158 1386 aaKnown RBP27.97■■■□□ 2.07
TMEM235-201ENST00000374946 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
TMEM235-201ENST00000374946 RANGAP1P46060 587 aaPredicted RBP27.91■■■□□ 2.06
TMEM235-201ENST00000374946 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
TMEM235-201ENST00000374946 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.05
TMEM235-201ENST00000374946 CFTRP13569 1480 aa27.83■■■□□ 2.05
TMEM235-201ENST00000374946 TSHZ2Q9NRE2 1034 aa27.81■■■□□ 2.04
TMEM235-201ENST00000374946 CUX1P39880 1505 aa27.81■■■□□ 2.04
TMEM235-201ENST00000374946 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
TMEM235-201ENST00000374946 KANK4Q5T7N3 995 aaPredicted RBP27.69■■■□□ 2.02
TMEM235-201ENST00000374946 ANP32EQ9BTT0 268 aa27.66■■■□□ 2.02
TMEM235-201ENST00000374946 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
TMEM235-201ENST00000374946 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
TMEM235-201ENST00000374946 CUX2O14529 1486 aa27.61■■■□□ 2.01
TMEM235-201ENST00000374946 PRXQ9BXM0 1461 aa27.6■■■□□ 2.01
TMEM235-201ENST00000374946 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
TMEM235-201ENST00000374946 KCNH8Q96L42 1107 aa27.58■■■□□ 2.01
TMEM235-201ENST00000374946 PRDM2Q13029 1718 aa27.56■■■□□ 2
TMEM235-201ENST00000374946 KIF27Q86VH2 1401 aa27.52■■■□□ 2
TMEM235-201ENST00000374946 CCNB3Q8WWL7 1395 aa27.5■■□□□ 1.99
TMEM235-201ENST00000374946 BCANQ96GW7 911 aa27.44■■□□□ 1.98
TMEM235-201ENST00000374946 MAPKBP1O60336 1514 aa27.43■■□□□ 1.98
TMEM235-201ENST00000374946 ITGAEP38570 1179 aa27.41■■□□□ 1.98
TMEM235-201ENST00000374946 FKBP8Q14318 412 aa27.38■■□□□ 1.97
TMEM235-201ENST00000374946 RAB3GAP2Q9H2M9 1393 aa27.38■■□□□ 1.97
TMEM235-201ENST00000374946 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms