RNA–Protein interactions for RNA: ENST00000404826.6

SDK1-202, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SDK1, Length 10,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-202ENST00000404826 PELP1Q8IZL8 1130 aaKnown RBP30.4■■■□□ 2.46
SDK1-202ENST00000404826 MYT1Q01538 1121 aa29.77■■■□□ 2.36
SDK1-202ENST00000404826 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
SDK1-202ENST00000404826 ERICH6Q7L0X2 663 aa28.61■■■□□ 2.17
SDK1-202ENST00000404826 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
SDK1-202ENST00000404826 CENPBP07199 599 aaPredicted RBP28.17■■■□□ 2.1
SDK1-202ENST00000404826 YTHDC1Q96MU7 727 aaKnown RBP28.16■■■□□ 2.1
SDK1-202ENST00000404826 TTBK1Q5TCY1 1321 aaPredicted RBP27.95■■■□□ 2.06
SDK1-202ENST00000404826 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
SDK1-202ENST00000404826 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
SDK1-202ENST00000404826 NEFLP07196 543 aa27.49■■□□□ 1.99
SDK1-202ENST00000404826 APLP2Q06481 763 aa27.36■■□□□ 1.97
SDK1-202ENST00000404826 EHMT2Q96KQ7 1210 aa27.29■■□□□ 1.96
SDK1-202ENST00000404826 DAXXQ9UER7 740 aaPredicted RBP27.17■■□□□ 1.94
SDK1-202ENST00000404826 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.93
SDK1-202ENST00000404826 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
SDK1-202ENST00000404826 FAM9AQ8IZU1 332 aaPredicted RBP26.85■■□□□ 1.89
SDK1-202ENST00000404826 RTL5Q5HYW3 569 aaPredicted RBP26.74■■□□□ 1.87
SDK1-202ENST00000404826 ZNF316A6NFI3 1004 aaPredicted RBP26.4■■□□□ 1.82
SDK1-202ENST00000404826 GLIPR1L2Q4G1C9 344 aa26.36■■□□□ 1.81
SDK1-202ENST00000404826 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
SDK1-202ENST00000404826 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
SDK1-202ENST00000404826 MYT1LQ9UL68 1186 aa25.8■■□□□ 1.72
SDK1-202ENST00000404826 HRCP23327 699 aa25.76■■□□□ 1.71
SDK1-202ENST00000404826 CLSPNQ9HAW4 1339 aa25.76■■□□□ 1.71
SDK1-202ENST00000404826 ATP1B4Q9UN42 357 aaPredicted RBP25.74■■□□□ 1.71
SDK1-202ENST00000404826 TRIM41Q8WV44 630 aa25.74■■□□□ 1.71
SDK1-202ENST00000404826 UBTFP17480 764 aaKnown RBP25.68■■□□□ 1.7
SDK1-202ENST00000404826 TRIM26Q12899 539 aaPredicted RBP25.62■■□□□ 1.69
SDK1-202ENST00000404826 ANP32BQ92688 251 aaKnown RBP25.56■■□□□ 1.68
SDK1-202ENST00000404826 EIF5BO60841 1220 aaKnown RBP25.51■■□□□ 1.67
SDK1-202ENST00000404826 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.67
SDK1-202ENST00000404826 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
SDK1-202ENST00000404826 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
SDK1-202ENST00000404826 PPARGC1BQ86YN6 1023 aaKnown RBP25.29■■□□□ 1.64
SDK1-202ENST00000404826 DIEXFQ68CQ4 756 aaKnown RBP25.26■■□□□ 1.63
SDK1-202ENST00000404826 ZBTB47Q9UFB7 747 aaPredicted RBP25.2■■□□□ 1.62
SDK1-202ENST00000404826 TNNT2P45379 298 aaPredicted RBP25.15■■□□□ 1.62
SDK1-202ENST00000404826 GTF3C3Q9Y5Q9 886 aa25.09■■□□□ 1.61
SDK1-202ENST00000404826 BCANQ96GW7 911 aa25.07■■□□□ 1.6
SDK1-202ENST00000404826 CNGB1Q14028 1251 aaPredicted RBP25.07■■□□□ 1.6
SDK1-202ENST00000404826 ITGAEP38570 1179 aa25.01■■□□□ 1.59
SDK1-202ENST00000404826 SLC4A1APQ9BWU0 796 aaKnown RBP24.92■■□□□ 1.58
SDK1-202ENST00000404826 HNRNPUL2Q1KMD3 747 aaKnown RBP24.87■■□□□ 1.57
SDK1-202ENST00000404826 HSP90AA1P07900 732 aaKnown RBP24.8■■□□□ 1.56
SDK1-202ENST00000404826 UPF2Q9HAU5 1272 aaKnown RBP24.8■■□□□ 1.56
SDK1-202ENST00000404826 TRIM44Q96DX7 344 aaPredicted RBP24.77■■□□□ 1.56
SDK1-202ENST00000404826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.76■■□□□ 1.55
SDK1-202ENST00000404826 NEFMP07197 916 aa24.74■■□□□ 1.55
SDK1-202ENST00000404826 CANXP27824 592 aaKnown RBP24.73■■□□□ 1.55
SDK1-202ENST00000404826 ANP32CO43423 234 aa24.73■■□□□ 1.55
SDK1-202ENST00000404826 CDK11BP21127 795 aaKnown RBP24.69■■□□□ 1.54
SDK1-202ENST00000404826 NCLP19338 710 aaKnown RBP24.67■■□□□ 1.54
SDK1-202ENST00000404826 ANP32EQ9BTT0 268 aa24.66■■□□□ 1.54
SDK1-202ENST00000404826 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
SDK1-202ENST00000404826 NPM2Q86SE8 214 aaKnown RBP24.56■■□□□ 1.52
SDK1-202ENST00000404826 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
SDK1-202ENST00000404826 BCL11AQ9H165 835 aa24.42■■□□□ 1.5
SDK1-202ENST00000404826 ERICH6BQ5W0A0 696 aa24.41■■□□□ 1.5
SDK1-202ENST00000404826 LOC105371045A0A1W2PR82 267 aa24.39■■□□□ 1.5
SDK1-202ENST00000404826 NBR1Q14596 966 aa24.35■■□□□ 1.49
SDK1-202ENST00000404826 FAM50AQ14320 339 aaKnown RBP24.32■■□□□ 1.48
SDK1-202ENST00000404826 NEUROD1Q13562 356 aa24.31■■□□□ 1.48
SDK1-202ENST00000404826 ZNF326Q5BKZ1 582 aaKnown RBP24.26■■□□□ 1.47
SDK1-202ENST00000404826 TRIM52Q96A61 297 aa24.21■■□□□ 1.47
SDK1-202ENST00000404826 DDRGK1Q96HY6 314 aa24.2■■□□□ 1.46
SDK1-202ENST00000404826 BECN1Q14457 450 aa24.19■■□□□ 1.46
SDK1-202ENST00000404826 GOLGA6L22H0YM25 854 aa24.19■■□□□ 1.46
SDK1-202ENST00000404826 ARXQ96QS3 562 aa24.19■■□□□ 1.46
SDK1-202ENST00000404826 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
SDK1-202ENST00000404826 FKBP8Q14318 412 aa24.11■■□□□ 1.45
SDK1-202ENST00000404826 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.1■■□□□ 1.45
SDK1-202ENST00000404826 DNTTIP2Q5QJE6 756 aaKnown RBP24.03■■□□□ 1.44
SDK1-202ENST00000404826 NAP1L5Q96NT1 182 aaPredicted RBP24.02■■□□□ 1.44
SDK1-202ENST00000404826 CHAF1AQ13111 956 aaPredicted RBP24.01■■□□□ 1.43
SDK1-202ENST00000404826 CCDC136Q96JN2 1154 aa23.97■■□□□ 1.43
SDK1-202ENST00000404826 GOLGA6L6A8MZA4 724 aa23.96■■□□□ 1.43
SDK1-202ENST00000404826 PTMAP06454 111 aaKnown RBP23.96■■□□□ 1.43
SDK1-202ENST00000404826 ZRSR1Q15695 479 aaKnown RBP23.95■■□□□ 1.42
SDK1-202ENST00000404826 NRDCO43847 1150 aa23.91■■□□□ 1.42
SDK1-202ENST00000404826 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
SDK1-202ENST00000404826 MYH16Q9H6N6 1097 aa23.83■■□□□ 1.41
SDK1-202ENST00000404826 HNRNPUQ00839 825 aaKnown RBP eCLIP23.82■■□□□ 1.4
SDK1-202ENST00000404826 L1TD1Q5T7N2 865 aaKnown RBP23.76■■□□□ 1.39
SDK1-202ENST00000404826 PTMSP20962 102 aa23.73■■□□□ 1.39
SDK1-202ENST00000404826 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
SDK1-202ENST00000404826 TNNT3P45378 269 aaPredicted RBP23.72■■□□□ 1.39
SDK1-202ENST00000404826 CALRP27797 417 aaKnown RBP23.69■■□□□ 1.38
SDK1-202ENST00000404826 MSNP26038 577 aaKnown RBP23.68■■□□□ 1.38
SDK1-202ENST00000404826 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
SDK1-202ENST00000404826 CASC1Q6TDU7 716 aa23.64■■□□□ 1.38
SDK1-202ENST00000404826 USP35Q9P2H5 1018 aa23.61■■□□□ 1.37
SDK1-202ENST00000404826 FAM9BQ8IZU0 186 aa23.59■■□□□ 1.37
SDK1-202ENST00000404826 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
SDK1-202ENST00000404826 RTN4Q9NQC3 1192 aaKnown RBP23.54■■□□□ 1.36
SDK1-202ENST00000404826 CCDC180Q9P1Z9 1646 aa23.53■■□□□ 1.36
SDK1-202ENST00000404826 NOP58Q9Y2X3 529 aaKnown RBP23.5■■□□□ 1.35
SDK1-202ENST00000404826 SETQ01105 290 aaPredicted RBP23.46■■□□□ 1.35
SDK1-202ENST00000404826 ARID4BQ4LE39 1312 aaPredicted RBP23.44■■□□□ 1.34
SDK1-202ENST00000404826 AMER1Q5JTC6 1135 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms