RNA–Protein interactions for RNA: ENST00000307358.6

HTRA3-201, Transcript of HtrA serine peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA3, Length 2,541 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3-201ENST00000307358 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
HTRA3-201ENST00000307358 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
HTRA3-201ENST00000307358 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
HTRA3-201ENST00000307358 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
HTRA3-201ENST00000307358 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
HTRA3-201ENST00000307358 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.73
HTRA3-201ENST00000307358 MYO15BQ96JP2 1530 aa31.93■■■□□ 2.7
HTRA3-201ENST00000307358 CHIC1Q5VXU3 224 aa31.81■■■□□ 2.68
HTRA3-201ENST00000307358 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
HTRA3-201ENST00000307358 HRCP23327 699 aa31.75■■■□□ 2.67
HTRA3-201ENST00000307358 PCGF6Q9BYE7 350 aa31.42■■■□□ 2.62
HTRA3-201ENST00000307358 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
HTRA3-201ENST00000307358 ABCC9O60706 1549 aa31.06■■■□□ 2.56
HTRA3-201ENST00000307358 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
HTRA3-201ENST00000307358 LOC105371045A0A1W2PR82 267 aa30.96■■■□□ 2.55
HTRA3-201ENST00000307358 NACADO15069 1562 aa30.72■■■□□ 2.51
HTRA3-201ENST00000307358 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
HTRA3-201ENST00000307358 RSF1Q96T23 1441 aaPredicted RBP30.51■■■□□ 2.47
HTRA3-201ENST00000307358 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
HTRA3-201ENST00000307358 CECR2Q9BXF3 1484 aa30.27■■■□□ 2.44
HTRA3-201ENST00000307358 TRIM41Q8WV44 630 aa30.16■■■□□ 2.42
HTRA3-201ENST00000307358 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
HTRA3-201ENST00000307358 ZEB1P37275 1124 aaPredicted RBP30.11■■■□□ 2.41
HTRA3-201ENST00000307358 FAM9AQ8IZU1 332 aaPredicted RBP30.02■■■□□ 2.4
HTRA3-201ENST00000307358 WIZO95785 1651 aa29.94■■■□□ 2.38
HTRA3-201ENST00000307358 UNC13AQ9UPW8 1703 aa29.93■■■□□ 2.38
HTRA3-201ENST00000307358 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
HTRA3-201ENST00000307358 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
HTRA3-201ENST00000307358 SCAF1Q9H7N4 1312 aaKnown RBP29.65■■■□□ 2.34
HTRA3-201ENST00000307358 SMARCA4P51532 1647 aa29.61■■■□□ 2.33
HTRA3-201ENST00000307358 PABPN1Q86U42 306 aaKnown RBP eCLIP29.56■■■□□ 2.32
HTRA3-201ENST00000307358 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
HTRA3-201ENST00000307358 PELP1Q8IZL8 1130 aaKnown RBP29.51■■■□□ 2.31
HTRA3-201ENST00000307358 TOP2AP11388 1531 aaKnown RBP29.44■■■□□ 2.3
HTRA3-201ENST00000307358 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.3
HTRA3-201ENST00000307358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
HTRA3-201ENST00000307358 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
HTRA3-201ENST00000307358 SMARCA2P51531 1590 aa29.29■■■□□ 2.28
HTRA3-201ENST00000307358 CCER1Q8TC90 406 aaPredicted RBP29.27■■■□□ 2.28
HTRA3-201ENST00000307358 ACIN1Q9UKV3 1341 aaKnown RBP29.13■■■□□ 2.25
HTRA3-201ENST00000307358 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
HTRA3-201ENST00000307358 NEUROD1Q13562 356 aa29.09■■■□□ 2.25
HTRA3-201ENST00000307358 PEG3Q9GZU2 1588 aa29.07■■■□□ 2.24
HTRA3-201ENST00000307358 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
HTRA3-201ENST00000307358 DIEXFQ68CQ4 756 aaKnown RBP29■■■□□ 2.23
HTRA3-201ENST00000307358 TTBK1Q5TCY1 1321 aaPredicted RBP29■■■□□ 2.23
HTRA3-201ENST00000307358 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
HTRA3-201ENST00000307358 ATAD2BQ9ULI0 1458 aa28.93■■■□□ 2.22
HTRA3-201ENST00000307358 SOGA1O94964 1423 aa28.87■■■□□ 2.21
HTRA3-201ENST00000307358 GTF3C3Q9Y5Q9 886 aa28.84■■■□□ 2.21
HTRA3-201ENST00000307358 TNIKQ9UKE5 1360 aa28.82■■■□□ 2.2
HTRA3-201ENST00000307358 CENPBP07199 599 aaPredicted RBP28.81■■■□□ 2.2
HTRA3-201ENST00000307358 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
HTRA3-201ENST00000307358 RUSC2Q8N2Y8 1516 aa28.74■■■□□ 2.19
HTRA3-201ENST00000307358 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
HTRA3-201ENST00000307358 EEA1Q15075 1411 aa28.67■■■□□ 2.18
HTRA3-201ENST00000307358 UBTFP17480 764 aaKnown RBP28.66■■■□□ 2.18
HTRA3-201ENST00000307358 ZNF316A6NFI3 1004 aaPredicted RBP28.62■■■□□ 2.17
HTRA3-201ENST00000307358 GOLGA3Q08378 1498 aa28.58■■■□□ 2.17
HTRA3-201ENST00000307358 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
HTRA3-201ENST00000307358 NCAPD3P42695 1498 aa28.44■■■□□ 2.14
HTRA3-201ENST00000307358 YTHDC1Q96MU7 727 aaKnown RBP28.42■■■□□ 2.14
HTRA3-201ENST00000307358 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
HTRA3-201ENST00000307358 HNRNPUL2Q1KMD3 747 aaKnown RBP28.38■■■□□ 2.13
HTRA3-201ENST00000307358 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
HTRA3-201ENST00000307358 MIER1Q8N108 512 aa28.34■■■□□ 2.13
HTRA3-201ENST00000307358 KIF21BO75037 1637 aa28.34■■■□□ 2.13
HTRA3-201ENST00000307358 CLIP1P30622 1438 aa28.29■■■□□ 2.12
HTRA3-201ENST00000307358 TOP2BQ02880 1626 aa28.23■■■□□ 2.11
HTRA3-201ENST00000307358 VPS8Q8N3P4 1428 aa28.23■■■□□ 2.11
HTRA3-201ENST00000307358 BIVM-ERCC5R4GMW8 1640 aa28.15■■■□□ 2.1
HTRA3-201ENST00000307358 RAPGEF2Q9Y4G8 1499 aa28.14■■■□□ 2.09
HTRA3-201ENST00000307358 MYT1Q01538 1121 aa28.11■■■□□ 2.09
HTRA3-201ENST00000307358 CFTRP13569 1480 aa28.11■■■□□ 2.09
HTRA3-201ENST00000307358 APLP2Q06481 763 aa28.08■■■□□ 2.09
HTRA3-201ENST00000307358 CUX1P39880 1505 aa28.07■■■□□ 2.08
HTRA3-201ENST00000307358 RANGAP1P46060 587 aaPredicted RBP28.04■■■□□ 2.08
HTRA3-201ENST00000307358 CC2D2AQ9P2K1 1620 aa27.98■■■□□ 2.07
HTRA3-201ENST00000307358 DHX57Q6P158 1386 aaKnown RBP27.89■■■□□ 2.05
HTRA3-201ENST00000307358 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
HTRA3-201ENST00000307358 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
HTRA3-201ENST00000307358 CLSPNQ9HAW4 1339 aa27.85■■■□□ 2.05
HTRA3-201ENST00000307358 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
HTRA3-201ENST00000307358 ARAP1Q96P48 1450 aa27.8■■■□□ 2.04
HTRA3-201ENST00000307358 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
HTRA3-201ENST00000307358 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
HTRA3-201ENST00000307358 KANK4Q5T7N3 995 aaPredicted RBP27.76■■■□□ 2.03
HTRA3-201ENST00000307358 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
HTRA3-201ENST00000307358 SUPT16HQ9Y5B9 1047 aaKnown RBP27.65■■■□□ 2.02
HTRA3-201ENST00000307358 CUX2O14529 1486 aa27.62■■■□□ 2.01
HTRA3-201ENST00000307358 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
HTRA3-201ENST00000307358 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
HTRA3-201ENST00000307358 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2
HTRA3-201ENST00000307358 NESP48681 1621 aa27.56■■■□□ 2
HTRA3-201ENST00000307358 IGF1RP08069 1367 aa27.55■■■□□ 2
HTRA3-201ENST00000307358 CCNB3Q8WWL7 1395 aa27.51■■□□□ 1.99
HTRA3-201ENST00000307358 ARHGAP35Q9NRY4 1499 aa27.47■■□□□ 1.99
HTRA3-201ENST00000307358 ITGAEP38570 1179 aa27.44■■□□□ 1.98
HTRA3-201ENST00000307358 CARMIL1Q5VZK9 1371 aa27.4■■□□□ 1.98
HTRA3-201ENST00000307358 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms