RNA–Protein interactions for RNA: ENST00000307358.6

HTRA3-201, Transcript of HtrA serine peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA3, Length 2,541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3-201ENST00000307358 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
HTRA3-201ENST00000307358 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
HTRA3-201ENST00000307358 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
HTRA3-201ENST00000307358 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
HTRA3-201ENST00000307358 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
HTRA3-201ENST00000307358 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.73
HTRA3-201ENST00000307358 MYO15BQ96JP2 1530 aa31.93■■■□□ 2.7
HTRA3-201ENST00000307358 CHIC1Q5VXU3 224 aa31.81■■■□□ 2.68
HTRA3-201ENST00000307358 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
HTRA3-201ENST00000307358 HRCP23327 699 aa31.75■■■□□ 2.67
HTRA3-201ENST00000307358 PCGF6Q9BYE7 350 aa31.42■■■□□ 2.62
HTRA3-201ENST00000307358 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
HTRA3-201ENST00000307358 ABCC9O60706 1549 aa31.06■■■□□ 2.56
HTRA3-201ENST00000307358 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
HTRA3-201ENST00000307358 LOC105371045A0A1W2PR82 267 aa30.96■■■□□ 2.55
HTRA3-201ENST00000307358 NACADO15069 1562 aa30.72■■■□□ 2.51
HTRA3-201ENST00000307358 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
HTRA3-201ENST00000307358 RSF1Q96T23 1441 aaPredicted RBP30.51■■■□□ 2.47
HTRA3-201ENST00000307358 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
HTRA3-201ENST00000307358 CECR2Q9BXF3 1484 aa30.27■■■□□ 2.44
HTRA3-201ENST00000307358 TRIM41Q8WV44 630 aa30.16■■■□□ 2.42
HTRA3-201ENST00000307358 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
HTRA3-201ENST00000307358 ZEB1P37275 1124 aaPredicted RBP30.11■■■□□ 2.41
HTRA3-201ENST00000307358 FAM9AQ8IZU1 332 aaPredicted RBP30.02■■■□□ 2.4
HTRA3-201ENST00000307358 WIZO95785 1651 aa29.94■■■□□ 2.38
HTRA3-201ENST00000307358 UNC13AQ9UPW8 1703 aa29.93■■■□□ 2.38
HTRA3-201ENST00000307358 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
HTRA3-201ENST00000307358 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
HTRA3-201ENST00000307358 SCAF1Q9H7N4 1312 aaKnown RBP29.65■■■□□ 2.34
HTRA3-201ENST00000307358 SMARCA4P51532 1647 aa29.61■■■□□ 2.33
HTRA3-201ENST00000307358 PABPN1Q86U42 306 aaKnown RBP eCLIP29.56■■■□□ 2.32
HTRA3-201ENST00000307358 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
HTRA3-201ENST00000307358 PELP1Q8IZL8 1130 aaKnown RBP29.51■■■□□ 2.31
HTRA3-201ENST00000307358 TOP2AP11388 1531 aaKnown RBP29.44■■■□□ 2.3
HTRA3-201ENST00000307358 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.3
HTRA3-201ENST00000307358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
HTRA3-201ENST00000307358 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
HTRA3-201ENST00000307358 SMARCA2P51531 1590 aa29.29■■■□□ 2.28
HTRA3-201ENST00000307358 CCER1Q8TC90 406 aaPredicted RBP29.27■■■□□ 2.28
HTRA3-201ENST00000307358 ACIN1Q9UKV3 1341 aaKnown RBP29.13■■■□□ 2.25
HTRA3-201ENST00000307358 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
HTRA3-201ENST00000307358 NEUROD1Q13562 356 aa29.09■■■□□ 2.25
HTRA3-201ENST00000307358 PEG3Q9GZU2 1588 aa29.07■■■□□ 2.24
HTRA3-201ENST00000307358 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
HTRA3-201ENST00000307358 DIEXFQ68CQ4 756 aaKnown RBP29■■■□□ 2.23
HTRA3-201ENST00000307358 TTBK1Q5TCY1 1321 aaPredicted RBP29■■■□□ 2.23
HTRA3-201ENST00000307358 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
HTRA3-201ENST00000307358 ATAD2BQ9ULI0 1458 aa28.93■■■□□ 2.22
HTRA3-201ENST00000307358 SOGA1O94964 1423 aa28.87■■■□□ 2.21
HTRA3-201ENST00000307358 GTF3C3Q9Y5Q9 886 aa28.84■■■□□ 2.21
HTRA3-201ENST00000307358 TNIKQ9UKE5 1360 aa28.82■■■□□ 2.2
HTRA3-201ENST00000307358 CENPBP07199 599 aaPredicted RBP28.81■■■□□ 2.2
HTRA3-201ENST00000307358 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
HTRA3-201ENST00000307358 RUSC2Q8N2Y8 1516 aa28.74■■■□□ 2.19
HTRA3-201ENST00000307358 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
HTRA3-201ENST00000307358 EEA1Q15075 1411 aa28.67■■■□□ 2.18
HTRA3-201ENST00000307358 UBTFP17480 764 aaKnown RBP28.66■■■□□ 2.18
HTRA3-201ENST00000307358 ZNF316A6NFI3 1004 aaPredicted RBP28.62■■■□□ 2.17
HTRA3-201ENST00000307358 GOLGA3Q08378 1498 aa28.58■■■□□ 2.17
HTRA3-201ENST00000307358 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
HTRA3-201ENST00000307358 NCAPD3P42695 1498 aa28.44■■■□□ 2.14
HTRA3-201ENST00000307358 YTHDC1Q96MU7 727 aaKnown RBP28.42■■■□□ 2.14
HTRA3-201ENST00000307358 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
HTRA3-201ENST00000307358 HNRNPUL2Q1KMD3 747 aaKnown RBP28.38■■■□□ 2.13
HTRA3-201ENST00000307358 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
HTRA3-201ENST00000307358 MIER1Q8N108 512 aa28.34■■■□□ 2.13
HTRA3-201ENST00000307358 KIF21BO75037 1637 aa28.34■■■□□ 2.13
HTRA3-201ENST00000307358 CLIP1P30622 1438 aa28.29■■■□□ 2.12
HTRA3-201ENST00000307358 TOP2BQ02880 1626 aa28.23■■■□□ 2.11
HTRA3-201ENST00000307358 VPS8Q8N3P4 1428 aa28.23■■■□□ 2.11
HTRA3-201ENST00000307358 BIVM-ERCC5R4GMW8 1640 aa28.15■■■□□ 2.1
HTRA3-201ENST00000307358 RAPGEF2Q9Y4G8 1499 aa28.14■■■□□ 2.09
HTRA3-201ENST00000307358 MYT1Q01538 1121 aa28.11■■■□□ 2.09
HTRA3-201ENST00000307358 CFTRP13569 1480 aa28.11■■■□□ 2.09
HTRA3-201ENST00000307358 APLP2Q06481 763 aa28.08■■■□□ 2.09
HTRA3-201ENST00000307358 CUX1P39880 1505 aa28.07■■■□□ 2.08
HTRA3-201ENST00000307358 RANGAP1P46060 587 aaPredicted RBP28.04■■■□□ 2.08
HTRA3-201ENST00000307358 CC2D2AQ9P2K1 1620 aa27.98■■■□□ 2.07
HTRA3-201ENST00000307358 DHX57Q6P158 1386 aaKnown RBP27.89■■■□□ 2.05
HTRA3-201ENST00000307358 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
HTRA3-201ENST00000307358 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
HTRA3-201ENST00000307358 CLSPNQ9HAW4 1339 aa27.85■■■□□ 2.05
HTRA3-201ENST00000307358 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
HTRA3-201ENST00000307358 ARAP1Q96P48 1450 aa27.8■■■□□ 2.04
HTRA3-201ENST00000307358 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
HTRA3-201ENST00000307358 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
HTRA3-201ENST00000307358 KANK4Q5T7N3 995 aaPredicted RBP27.76■■■□□ 2.03
HTRA3-201ENST00000307358 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
HTRA3-201ENST00000307358 SUPT16HQ9Y5B9 1047 aaKnown RBP27.65■■■□□ 2.02
HTRA3-201ENST00000307358 CUX2O14529 1486 aa27.62■■■□□ 2.01
HTRA3-201ENST00000307358 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
HTRA3-201ENST00000307358 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
HTRA3-201ENST00000307358 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2
HTRA3-201ENST00000307358 NESP48681 1621 aa27.56■■■□□ 2
HTRA3-201ENST00000307358 IGF1RP08069 1367 aa27.55■■■□□ 2
HTRA3-201ENST00000307358 CCNB3Q8WWL7 1395 aa27.51■■□□□ 1.99
HTRA3-201ENST00000307358 ARHGAP35Q9NRY4 1499 aa27.47■■□□□ 1.99
HTRA3-201ENST00000307358 ITGAEP38570 1179 aa27.44■■□□□ 1.98
HTRA3-201ENST00000307358 CARMIL1Q5VZK9 1371 aa27.4■■□□□ 1.98
HTRA3-201ENST00000307358 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms