RNA–Protein interactions for RNA: ENST00000237530.10

RPN2-201, Transcript of ribophorin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN2, Length 2,515 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-201ENST00000237530 NISCHQ9Y2I1 1504 aa39.86■■■■□ 3.97
RPN2-201ENST00000237530 CCDC180Q9P1Z9 1646 aa34.29■■■■□ 3.08
RPN2-201ENST00000237530 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
RPN2-201ENST00000237530 ZCCHC6Q5VYS8 1495 aaKnown RBP33.49■■■□□ 2.95
RPN2-201ENST00000237530 SHROOM4Q9ULL8 1493 aa33.38■■■□□ 2.93
RPN2-201ENST00000237530 ABCC9O60706 1549 aa32.76■■■□□ 2.83
RPN2-201ENST00000237530 DCAF1Q9Y4B6 1507 aa32.64■■■□□ 2.82
RPN2-201ENST00000237530 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
RPN2-201ENST00000237530 SCRIBQ14160 1630 aa32.07■■■□□ 2.72
RPN2-201ENST00000237530 MYO15BQ96JP2 1530 aa32.06■■■□□ 2.72
RPN2-201ENST00000237530 NACADO15069 1562 aa31.97■■■□□ 2.71
RPN2-201ENST00000237530 RB1CC1Q8TDY2 1594 aa31.69■■■□□ 2.66
RPN2-201ENST00000237530 CECR2Q9BXF3 1484 aa31.2■■■□□ 2.59
RPN2-201ENST00000237530 UNC13AQ9UPW8 1703 aa31.2■■■□□ 2.58
RPN2-201ENST00000237530 RSF1Q96T23 1441 aaPredicted RBP31.18■■■□□ 2.58
RPN2-201ENST00000237530 PABPN1Q86U42 306 aaKnown RBP eCLIP31.17■■■□□ 2.58
RPN2-201ENST00000237530 MROH2BQ7Z745 1585 aa30.96■■■□□ 2.55
RPN2-201ENST00000237530 BICRAQ9NZM4 1560 aa30.85■■■□□ 2.53
RPN2-201ENST00000237530 CHIC1Q5VXU3 224 aa30.83■■■□□ 2.53
RPN2-201ENST00000237530 WIZO95785 1651 aa30.75■■■□□ 2.51
RPN2-201ENST00000237530 BAZ1AQ9NRL2 1556 aaPredicted RBP30.68■■■□□ 2.5
RPN2-201ENST00000237530 SMARCA4P51532 1647 aa30.55■■■□□ 2.48
RPN2-201ENST00000237530 TOP2AP11388 1531 aaKnown RBP30.2■■■□□ 2.42
RPN2-201ENST00000237530 TRIM41Q8WV44 630 aa30.12■■■□□ 2.41
RPN2-201ENST00000237530 CCDC88BA6NC98 1476 aa30.11■■■□□ 2.41
RPN2-201ENST00000237530 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
RPN2-201ENST00000237530 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
RPN2-201ENST00000237530 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
RPN2-201ENST00000237530 LOC105371045A0A1W2PR82 267 aa29.95■■■□□ 2.39
RPN2-201ENST00000237530 EIF4G1Q04637 1599 aaKnown RBP29.91■■■□□ 2.38
RPN2-201ENST00000237530 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
RPN2-201ENST00000237530 FAM9AQ8IZU1 332 aaPredicted RBP29.88■■■□□ 2.37
RPN2-201ENST00000237530 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
RPN2-201ENST00000237530 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
RPN2-201ENST00000237530 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
RPN2-201ENST00000237530 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
RPN2-201ENST00000237530 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.3
RPN2-201ENST00000237530 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.29
RPN2-201ENST00000237530 SOGA1O94964 1423 aa29.26■■■□□ 2.27
RPN2-201ENST00000237530 SYNJ1O43426 1573 aa29.2■■■□□ 2.27
RPN2-201ENST00000237530 RUSC2Q8N2Y8 1516 aa29.18■■■□□ 2.26
RPN2-201ENST00000237530 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
RPN2-201ENST00000237530 CFTRP13569 1480 aa29.1■■■□□ 2.25
RPN2-201ENST00000237530 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
RPN2-201ENST00000237530 CSRNP3Q8WYN3 585 aa29■■■□□ 2.23
RPN2-201ENST00000237530 PCGF6Q9BYE7 350 aa28.91■■■□□ 2.22
RPN2-201ENST00000237530 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
RPN2-201ENST00000237530 CUX1P39880 1505 aa28.88■■■□□ 2.21
RPN2-201ENST00000237530 NESP48681 1621 aa28.88■■■□□ 2.21
RPN2-201ENST00000237530 UBTFP17480 764 aaKnown RBP28.85■■■□□ 2.21
RPN2-201ENST00000237530 EEA1Q15075 1411 aa28.82■■■□□ 2.2
RPN2-201ENST00000237530 BIVM-ERCC5R4GMW8 1640 aa28.79■■■□□ 2.2
RPN2-201ENST00000237530 PRDM2Q13029 1718 aa28.75■■■□□ 2.19
RPN2-201ENST00000237530 PPARGC1BQ86YN6 1023 aaKnown RBP28.72■■■□□ 2.19
RPN2-201ENST00000237530 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
RPN2-201ENST00000237530 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.17
RPN2-201ENST00000237530 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
RPN2-201ENST00000237530 TNIKQ9UKE5 1360 aa28.61■■■□□ 2.17
RPN2-201ENST00000237530 CEP162Q5TB80 1403 aa28.61■■■□□ 2.17
RPN2-201ENST00000237530 RAPGEF2Q9Y4G8 1499 aa28.58■■■□□ 2.17
RPN2-201ENST00000237530 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
RPN2-201ENST00000237530 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
RPN2-201ENST00000237530 TRIM26Q12899 539 aaPredicted RBP28.51■■■□□ 2.15
RPN2-201ENST00000237530 KIF27Q86VH2 1401 aa28.5■■■□□ 2.15
RPN2-201ENST00000237530 LAMC3Q9Y6N6 1575 aa28.49■■■□□ 2.15
RPN2-201ENST00000237530 KIF21BO75037 1637 aa28.48■■■□□ 2.15
RPN2-201ENST00000237530 CUX2O14529 1486 aa28.47■■■□□ 2.15
RPN2-201ENST00000237530 TTBK1Q5TCY1 1321 aaPredicted RBP28.46■■■□□ 2.15
RPN2-201ENST00000237530 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
RPN2-201ENST00000237530 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
RPN2-201ENST00000237530 PDS5BQ9NTI5 1447 aa28.39■■■□□ 2.13
RPN2-201ENST00000237530 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
RPN2-201ENST00000237530 PRXQ9BXM0 1461 aa28.36■■■□□ 2.13
RPN2-201ENST00000237530 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
RPN2-201ENST00000237530 POLA1P09884 1462 aaPredicted RBP28.34■■■□□ 2.13
RPN2-201ENST00000237530 KIF21AQ7Z4S6 1674 aa28.32■■■□□ 2.12
RPN2-201ENST00000237530 IGF1RP08069 1367 aa28.32■■■□□ 2.12
RPN2-201ENST00000237530 CLIP1P30622 1438 aa28.3■■■□□ 2.12
RPN2-201ENST00000237530 ERICH3Q5RHP9 1530 aa28.21■■■□□ 2.11
RPN2-201ENST00000237530 CARMIL1Q5VZK9 1371 aa28.18■■■□□ 2.1
RPN2-201ENST00000237530 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
RPN2-201ENST00000237530 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
RPN2-201ENST00000237530 HRCP23327 699 aa28.09■■■□□ 2.09
RPN2-201ENST00000237530 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
RPN2-201ENST00000237530 MRC2Q9UBG0 1479 aa27.97■■■□□ 2.07
RPN2-201ENST00000237530 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
RPN2-201ENST00000237530 ARAP1Q96P48 1450 aa27.94■■■□□ 2.06
RPN2-201ENST00000237530 GAPVD1Q14C86 1478 aa27.94■■■□□ 2.06
RPN2-201ENST00000237530 APLP2Q06481 763 aa27.94■■■□□ 2.06
RPN2-201ENST00000237530 WDR97A6NE52 1622 aa27.93■■■□□ 2.06
RPN2-201ENST00000237530 P3H3Q8IVL6 736 aa27.92■■■□□ 2.06
RPN2-201ENST00000237530 AQRO60306 1485 aaKnown RBP eCLIP27.9■■■□□ 2.061e-6■■■■■ 47.6
RPN2-201ENST00000237530 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.05
RPN2-201ENST00000237530 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.05
RPN2-201ENST00000237530 ABCA5Q8WWZ7 1642 aa27.86■■■□□ 2.05
RPN2-201ENST00000237530 ZNF608Q9ULD9 1512 aaPredicted RBP27.79■■■□□ 2.04
RPN2-201ENST00000237530 CUL7Q14999 1698 aa27.78■■■□□ 2.04
RPN2-201ENST00000237530 WDR62O43379 1518 aa27.75■■■□□ 2.03
RPN2-201ENST00000237530 KANK4Q5T7N3 995 aaPredicted RBP27.75■■■□□ 2.03
RPN2-201ENST00000237530 ATP1B4Q9UN42 357 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms