RNA–Protein interactions for RNA: ENST00000265634.3

NPTX2-201, Transcript of neuronal pentraxin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPTX2, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2-201ENST00000265634 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
NPTX2-201ENST00000265634 SHROOM4Q9ULL8 1493 aa33.27■■■□□ 2.92
NPTX2-201ENST00000265634 CCDC180Q9P1Z9 1646 aa32.74■■■□□ 2.83
NPTX2-201ENST00000265634 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
NPTX2-201ENST00000265634 DCAF8L2P0C7V8 631 aa32.57■■■□□ 2.8
NPTX2-201ENST00000265634 SUPT5HO00267 1087 aaKnown RBP32.55■■■□□ 2.8
NPTX2-201ENST00000265634 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
NPTX2-201ENST00000265634 CHIC1Q5VXU3 224 aa31.4■■■□□ 2.62
NPTX2-201ENST00000265634 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.6
NPTX2-201ENST00000265634 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
NPTX2-201ENST00000265634 ABCC9O60706 1549 aa30.86■■■□□ 2.53
NPTX2-201ENST00000265634 LOC105371045A0A1W2PR82 267 aa30.63■■■□□ 2.49
NPTX2-201ENST00000265634 RSF1Q96T23 1441 aaPredicted RBP30.62■■■□□ 2.49
NPTX2-201ENST00000265634 PCGF6Q9BYE7 350 aa30.43■■■□□ 2.46
NPTX2-201ENST00000265634 NACADO15069 1562 aa30.39■■■□□ 2.46
NPTX2-201ENST00000265634 CECR2Q9BXF3 1484 aa30.32■■■□□ 2.44
NPTX2-201ENST00000265634 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
NPTX2-201ENST00000265634 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
NPTX2-201ENST00000265634 HRCP23327 699 aa30.16■■■□□ 2.42
NPTX2-201ENST00000265634 FAM9AQ8IZU1 332 aaPredicted RBP30.16■■■□□ 2.42
NPTX2-201ENST00000265634 MROH2BQ7Z745 1585 aa30.14■■■□□ 2.42
NPTX2-201ENST00000265634 EHMT2Q96KQ7 1210 aa30.07■■■□□ 2.4
NPTX2-201ENST00000265634 WIZO95785 1651 aa29.97■■■□□ 2.39
NPTX2-201ENST00000265634 PPARGC1BQ86YN6 1023 aaKnown RBP29.8■■■□□ 2.36
NPTX2-201ENST00000265634 TRIM26Q12899 539 aaPredicted RBP29.7■■■□□ 2.35
NPTX2-201ENST00000265634 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
NPTX2-201ENST00000265634 PABPN1Q86U42 306 aaKnown RBP eCLIP29.61■■■□□ 2.33
NPTX2-201ENST00000265634 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.31
NPTX2-201ENST00000265634 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
NPTX2-201ENST00000265634 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
NPTX2-201ENST00000265634 CCDC88BA6NC98 1476 aa29.38■■■□□ 2.29
NPTX2-201ENST00000265634 EIF4G1Q04637 1599 aaKnown RBP29.34■■■□□ 2.29
NPTX2-201ENST00000265634 ABCC8Q09428 1581 aa29.34■■■□□ 2.29
NPTX2-201ENST00000265634 SMARCA2P51531 1590 aa29.26■■■□□ 2.28
NPTX2-201ENST00000265634 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.26
NPTX2-201ENST00000265634 SOGA1O94964 1423 aa29.05■■■□□ 2.24
NPTX2-201ENST00000265634 TTBK1Q5TCY1 1321 aaPredicted RBP29.02■■■□□ 2.24
NPTX2-201ENST00000265634 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
NPTX2-201ENST00000265634 ZEB1P37275 1124 aaPredicted RBP28.88■■■□□ 2.21
NPTX2-201ENST00000265634 UBTFP17480 764 aaKnown RBP28.85■■■□□ 2.21
NPTX2-201ENST00000265634 CSRNP3Q8WYN3 585 aa28.84■■■□□ 2.21
NPTX2-201ENST00000265634 CEP162Q5TB80 1403 aa28.8■■■□□ 2.2
NPTX2-201ENST00000265634 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
NPTX2-201ENST00000265634 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
NPTX2-201ENST00000265634 PEG3Q9GZU2 1588 aa28.77■■■□□ 2.2
NPTX2-201ENST00000265634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.75■■■□□ 2.19
NPTX2-201ENST00000265634 BAZ1BQ9UIG0 1483 aaKnown RBP28.74■■■□□ 2.19
NPTX2-201ENST00000265634 TNIKQ9UKE5 1360 aa28.67■■■□□ 2.18
NPTX2-201ENST00000265634 EEA1Q15075 1411 aa28.63■■■□□ 2.17
NPTX2-201ENST00000265634 SYNJ1O43426 1573 aa28.63■■■□□ 2.17
NPTX2-201ENST00000265634 CCER1Q8TC90 406 aaPredicted RBP28.6■■■□□ 2.17
NPTX2-201ENST00000265634 GOLGA3Q08378 1498 aa28.55■■■□□ 2.16
NPTX2-201ENST00000265634 RANGAP1P46060 587 aaPredicted RBP28.54■■■□□ 2.16
NPTX2-201ENST00000265634 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
NPTX2-201ENST00000265634 RAPGEF2Q9Y4G8 1499 aa28.31■■■□□ 2.12
NPTX2-201ENST00000265634 CLIP1P30622 1438 aa28.3■■■□□ 2.12
NPTX2-201ENST00000265634 KIF21BO75037 1637 aa28.25■■■□□ 2.11
NPTX2-201ENST00000265634 TOP2BQ02880 1626 aa28.19■■■□□ 2.1
NPTX2-201ENST00000265634 HNRNPUL2Q1KMD3 747 aaKnown RBP28.19■■■□□ 2.1
NPTX2-201ENST00000265634 NCAPD3P42695 1498 aa28.18■■■□□ 2.1
NPTX2-201ENST00000265634 APLP2Q06481 763 aa28.12■■■□□ 2.09
NPTX2-201ENST00000265634 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
NPTX2-201ENST00000265634 PELP1Q8IZL8 1130 aaKnown RBP28.1■■■□□ 2.09
NPTX2-201ENST00000265634 VPS8Q8N3P4 1428 aa28.09■■■□□ 2.09
NPTX2-201ENST00000265634 CUX1P39880 1505 aa28.04■■■□□ 2.08
NPTX2-201ENST00000265634 BIVM-ERCC5R4GMW8 1640 aa28.04■■■□□ 2.08
NPTX2-201ENST00000265634 CFTRP13569 1480 aa27.96■■■□□ 2.07
NPTX2-201ENST00000265634 PRXQ9BXM0 1461 aa27.92■■■□□ 2.06
NPTX2-201ENST00000265634 DIEXFQ68CQ4 756 aaKnown RBP27.9■■■□□ 2.06
NPTX2-201ENST00000265634 KIF27Q86VH2 1401 aa27.89■■■□□ 2.05
NPTX2-201ENST00000265634 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
NPTX2-201ENST00000265634 ARAP1Q96P48 1450 aa27.81■■■□□ 2.04
NPTX2-201ENST00000265634 KANK4Q5T7N3 995 aaPredicted RBP27.8■■■□□ 2.04
NPTX2-201ENST00000265634 SCAF1Q9H7N4 1312 aaKnown RBP27.78■■■□□ 2.04
NPTX2-201ENST00000265634 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
NPTX2-201ENST00000265634 CUX2O14529 1486 aa27.72■■■□□ 2.03
NPTX2-201ENST00000265634 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
NPTX2-201ENST00000265634 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
NPTX2-201ENST00000265634 IGF1RP08069 1367 aa27.63■■■□□ 2.01
NPTX2-201ENST00000265634 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
NPTX2-201ENST00000265634 ARHGAP35Q9NRY4 1499 aa27.6■■■□□ 2.01
NPTX2-201ENST00000265634 NEUROD1Q13562 356 aa27.58■■■□□ 2.01
NPTX2-201ENST00000265634 ITGAEP38570 1179 aa27.58■■■□□ 2.01
NPTX2-201ENST00000265634 CARMIL1Q5VZK9 1371 aa27.53■■■□□ 2
NPTX2-201ENST00000265634 PRDM2Q13029 1718 aa27.52■■■□□ 2
NPTX2-201ENST00000265634 P3H3Q8IVL6 736 aa27.51■■□□□ 1.99
NPTX2-201ENST00000265634 ACIN1Q9UKV3 1341 aaKnown RBP27.51■■□□□ 1.99
NPTX2-201ENST00000265634 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
NPTX2-201ENST00000265634 NESP48681 1621 aa27.45■■□□□ 1.98
NPTX2-201ENST00000265634 ATP1B4Q9UN42 357 aaPredicted RBP27.44■■□□□ 1.98
NPTX2-201ENST00000265634 YTHDC1Q96MU7 727 aaKnown RBP27.43■■□□□ 1.98
NPTX2-201ENST00000265634 RAD54L2Q9Y4B4 1467 aa27.43■■□□□ 1.98
NPTX2-201ENST00000265634 DHX57Q6P158 1386 aaKnown RBP27.4■■□□□ 1.98
NPTX2-201ENST00000265634 CCNB3Q8WWL7 1395 aa27.37■■□□□ 1.97
NPTX2-201ENST00000265634 CENPBP07199 599 aaPredicted RBP27.36■■□□□ 1.97
NPTX2-201ENST00000265634 MIER1Q8N108 512 aa27.36■■□□□ 1.97
NPTX2-201ENST00000265634 RRBP1Q9P2E9 1410 aaKnown RBP27.36■■□□□ 1.97
NPTX2-201ENST00000265634 GTF3C3Q9Y5Q9 886 aa27.28■■□□□ 1.96
NPTX2-201ENST00000265634 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
NPTX2-201ENST00000265634 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms