RNA–Protein interactions for RNA: ENST00000430555.5

LINC01237-203, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4 BASIC

Gene LINC01237, Length 843 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-203ENST00000430555 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
LINC01237-203ENST00000430555 ABCC9O60706 1549 aa40.19■■■■■ 4.02
LINC01237-203ENST00000430555 CCDC180Q9P1Z9 1646 aa39.94■■■■□ 3.99
LINC01237-203ENST00000430555 RB1CC1Q8TDY2 1594 aa38.08■■■■□ 3.69
LINC01237-203ENST00000430555 DNAJC5BQ9UF47 199 aa37.95■■■■□ 3.67
LINC01237-203ENST00000430555 NACADO15069 1562 aa37.76■■■■□ 3.63
LINC01237-203ENST00000430555 DCAF8L2P0C7V8 631 aa37.47■■■■□ 3.59
LINC01237-203ENST00000430555 UNC13AQ9UPW8 1703 aa37.44■■■■□ 3.58
LINC01237-203ENST00000430555 PABPN1Q86U42 306 aaKnown RBP eCLIP37.35■■■■□ 3.57
LINC01237-203ENST00000430555 MYO15BQ96JP2 1530 aa37.12■■■■□ 3.53
LINC01237-203ENST00000430555 BICRAQ9NZM4 1560 aa37.12■■■■□ 3.53
LINC01237-203ENST00000430555 ZCCHC6Q5VYS8 1495 aaKnown RBP36.76■■■■□ 3.48
LINC01237-203ENST00000430555 DCAF1Q9Y4B6 1507 aa36.59■■■■□ 3.45
LINC01237-203ENST00000430555 SCRIBQ14160 1630 aa36.45■■■■□ 3.42
LINC01237-203ENST00000430555 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
LINC01237-203ENST00000430555 CC2D2AQ9P2K1 1620 aa36.31■■■■□ 3.4
LINC01237-203ENST00000430555 CECR2Q9BXF3 1484 aa36.18■■■■□ 3.38
LINC01237-203ENST00000430555 EIF4G1Q04637 1599 aaKnown RBP36.15■■■■□ 3.38
LINC01237-203ENST00000430555 DNAJC5Q9H3Z4 198 aa34.87■■■■□ 3.17
LINC01237-203ENST00000430555 NCAPD3P42695 1498 aa34.85■■■■□ 3.17
LINC01237-203ENST00000430555 ATAD2BQ9ULI0 1458 aa34.77■■■■□ 3.16
LINC01237-203ENST00000430555 SMARCA4P51532 1647 aa34.72■■■■□ 3.15
LINC01237-203ENST00000430555 CUX2O14529 1486 aa34.63■■■■□ 3.13
LINC01237-203ENST00000430555 ERCC6Q03468 1493 aa34.62■■■■□ 3.13
LINC01237-203ENST00000430555 HMGXB3Q12766 1538 aa34.6■■■■□ 3.13
LINC01237-203ENST00000430555 SMARCA2P51531 1590 aa34.6■■■■□ 3.13
LINC01237-203ENST00000430555 NESP48681 1621 aa34.51■■■■□ 3.11
LINC01237-203ENST00000430555 BAZ1AQ9NRL2 1556 aaPredicted RBP34.43■■■■□ 3.1
LINC01237-203ENST00000430555 BAZ1BQ9UIG0 1483 aaKnown RBP34.38■■■■□ 3.09
LINC01237-203ENST00000430555 PEG3Q9GZU2 1588 aa34.35■■■■□ 3.09
LINC01237-203ENST00000430555 MROH2BQ7Z745 1585 aa34.26■■■■□ 3.07
LINC01237-203ENST00000430555 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
LINC01237-203ENST00000430555 LAMC3Q9Y6N6 1575 aa34.12■■■■□ 3.05
LINC01237-203ENST00000430555 KIF21AQ7Z4S6 1674 aa34.1■■■■□ 3.05
LINC01237-203ENST00000430555 WIZO95785 1651 aa33.88■■■■□ 3.01
LINC01237-203ENST00000430555 PDS5BQ9NTI5 1447 aa33.86■■■■□ 3.01
LINC01237-203ENST00000430555 CADPSQ9ULU8 1353 aa33.77■■■■□ 3
LINC01237-203ENST00000430555 MRC2Q9UBG0 1479 aa33.66■■■□□ 2.98
LINC01237-203ENST00000430555 WDR62O43379 1518 aa33.63■■■□□ 2.97
LINC01237-203ENST00000430555 CEP164Q9UPV0 1460 aa33.47■■■□□ 2.95
LINC01237-203ENST00000430555 FANCD2Q9BXW9 1451 aa33.44■■■□□ 2.94
LINC01237-203ENST00000430555 RSF1Q96T23 1441 aaPredicted RBP33.41■■■□□ 2.94
LINC01237-203ENST00000430555 CFTRP13569 1480 aa33.37■■■□□ 2.93
LINC01237-203ENST00000430555 TOP2AP11388 1531 aaKnown RBP33.35■■■□□ 2.93
LINC01237-203ENST00000430555 TRIM41Q8WV44 630 aa33.28■■■□□ 2.92
LINC01237-203ENST00000430555 URB2Q14146 1524 aaKnown RBP33.23■■■□□ 2.91
LINC01237-203ENST00000430555 PRDM2Q13029 1718 aa33.14■■■□□ 2.9
LINC01237-203ENST00000430555 CCDC88BA6NC98 1476 aa32.98■■■□□ 2.87
LINC01237-203ENST00000430555 OSCARQ8IYS5 282 aa32.94■■■□□ 2.86
LINC01237-203ENST00000430555 ZNF608Q9ULD9 1512 aaPredicted RBP32.88■■■□□ 2.85
LINC01237-203ENST00000430555 TOPBP1Q92547 1522 aa32.81■■■□□ 2.84
LINC01237-203ENST00000430555 IFT140Q96RY7 1462 aa32.79■■■□□ 2.84
LINC01237-203ENST00000430555 RIMBP3CA6NJZ7 1639 aa32.73■■■□□ 2.83
LINC01237-203ENST00000430555 RIMBP3BA6NNM3 1639 aa32.73■■■□□ 2.83
LINC01237-203ENST00000430555 RIMBP3Q9UFD9 1639 aa32.73■■■□□ 2.83
LINC01237-203ENST00000430555 EIF4G3O43432 1585 aaKnown RBP32.69■■■□□ 2.82
LINC01237-203ENST00000430555 DNMBPQ6XZF7 1577 aa32.66■■■□□ 2.82
LINC01237-203ENST00000430555 TARBP1Q13395 1621 aaKnown RBP32.58■■■□□ 2.81
LINC01237-203ENST00000430555 ABCC8Q09428 1581 aa32.58■■■□□ 2.81
LINC01237-203ENST00000430555 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
LINC01237-203ENST00000430555 CHD1O14646 1710 aa32.54■■■□□ 2.8
LINC01237-203ENST00000430555 AQRO60306 1485 aaKnown RBP eCLIP32.5■■■□□ 2.79
LINC01237-203ENST00000430555 POLA1P09884 1462 aaPredicted RBP32.46■■■□□ 2.79
LINC01237-203ENST00000430555 RAD54L2Q9Y4B4 1467 aa32.37■■■□□ 2.77
LINC01237-203ENST00000430555 CYB5RLQ6IPT4 315 aa32.26■■■□□ 2.75
LINC01237-203ENST00000430555 ARAP1Q96P48 1450 aa32.26■■■□□ 2.75
LINC01237-203ENST00000430555 TDRD9Q8NDG6 1382 aaKnown RBP32.24■■■□□ 2.75
LINC01237-203ENST00000430555 SOGA1O94964 1423 aa32.24■■■□□ 2.75
LINC01237-203ENST00000430555 FBLN2P98095 1184 aa32.23■■■□□ 2.75
LINC01237-203ENST00000430555 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
LINC01237-203ENST00000430555 CUX1P39880 1505 aa32.21■■■□□ 2.75
LINC01237-203ENST00000430555 SNAPC4Q5SXM2 1469 aa32.17■■■□□ 2.74
LINC01237-203ENST00000430555 WDR97A6NE52 1622 aa32.11■■■□□ 2.73
LINC01237-203ENST00000430555 CLASP1Q7Z460 1538 aa32.1■■■□□ 2.73
LINC01237-203ENST00000430555 MAGI1Q96QZ7 1491 aaPredicted RBP32■■■□□ 2.71
LINC01237-203ENST00000430555 PBRM1Q86U86 1689 aa31.99■■■□□ 2.71
LINC01237-203ENST00000430555 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
LINC01237-203ENST00000430555 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
LINC01237-203ENST00000430555 CHMP7Q8WUX9 453 aaPredicted RBP31.93■■■□□ 2.7
LINC01237-203ENST00000430555 TRHP20396 242 aaPredicted RBP31.92■■■□□ 2.7
LINC01237-203ENST00000430555 SYNJ2O15056 1496 aa31.91■■■□□ 2.7
LINC01237-203ENST00000430555 ABCA5Q8WWZ7 1642 aa31.86■■■□□ 2.69
LINC01237-203ENST00000430555 GAPVD1Q14C86 1478 aa31.86■■■□□ 2.69
LINC01237-203ENST00000430555 ABCA10Q8WWZ4 1543 aa31.81■■■□□ 2.68
LINC01237-203ENST00000430555 SUPT5HO00267 1087 aaKnown RBP31.72■■■□□ 2.67
LINC01237-203ENST00000430555 ERCC6L2Q5T890 1561 aa31.66■■■□□ 2.66
LINC01237-203ENST00000430555 ADAMTS12P58397 1594 aa31.63■■■□□ 2.65
LINC01237-203ENST00000430555 BIVM-ERCC5R4GMW8 1640 aa31.62■■■□□ 2.65
LINC01237-203ENST00000430555 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
LINC01237-203ENST00000430555 CEP170Q5SW79 1584 aa31.59■■■□□ 2.65
LINC01237-203ENST00000430555 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
LINC01237-203ENST00000430555 WRNQ14191 1432 aaPredicted RBP eCLIP31.57■■■□□ 2.64
LINC01237-203ENST00000430555 NUP160Q12769 1436 aa31.52■■■□□ 2.64
LINC01237-203ENST00000430555 SHROOM2Q13796 1616 aa31.46■■■□□ 2.63
LINC01237-203ENST00000430555 FHAD1B1AJZ9 1412 aa31.41■■■□□ 2.62
LINC01237-203ENST00000430555 ERICH3Q5RHP9 1530 aa31.39■■■□□ 2.61
LINC01237-203ENST00000430555 KIF13AQ9H1H9 1805 aa31.24■■■□□ 2.59
LINC01237-203ENST00000430555 PRG4Q92954 1404 aaPredicted RBP31.2■■■□□ 2.59
LINC01237-203ENST00000430555 RUSC2Q8N2Y8 1516 aa31.19■■■□□ 2.58
LINC01237-203ENST00000430555 JPH4Q96JJ6 628 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms