Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 AC090340.1-201ENST00000620778 4980 ntBASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 LINC01711-201ENST00000598340 967 ntBASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 AL591684.3-201ENST00000605187 298 ntBASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 AL691432.3-201ENST00000621860 400 ntBASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 TPM4P1-201ENST00000436100 807 ntBASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 ABALON-201ENST00000629058 1903 ntBASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.7■□□□□ 0.9
VAT1LQ9HCJ6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 AC009533.2-201ENST00000543664 586 ntBASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VAT1LQ9HCJ6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.68■□□□□ 0.9
VAT1LQ9HCJ6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms