RNA–Protein interactions for RNA: ENST00000543664.1

AC009533.2-201, humanhuman

BASIC

Gene AC009533.2, Length 586 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009533.2-201ENST00000543664 NISCHQ9Y2I1 1504 aa42.73■■■■■ 4.43
AC009533.2-201ENST00000543664 CCDC180Q9P1Z9 1646 aa37.9■■■■□ 3.66
AC009533.2-201ENST00000543664 ABCC9O60706 1549 aa37.59■■■■□ 3.61
AC009533.2-201ENST00000543664 RB1CC1Q8TDY2 1594 aa35.74■■■■□ 3.31
AC009533.2-201ENST00000543664 DCAF8L2P0C7V8 631 aa35.68■■■■□ 3.3
AC009533.2-201ENST00000543664 NACADO15069 1562 aa35.64■■■■□ 3.3
AC009533.2-201ENST00000543664 ZCCHC6Q5VYS8 1495 aaKnown RBP35.61■■■■□ 3.29
AC009533.2-201ENST00000543664 MYO15BQ96JP2 1530 aa35.52■■■■□ 3.28
AC009533.2-201ENST00000543664 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
AC009533.2-201ENST00000543664 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
AC009533.2-201ENST00000543664 DNAJC5BQ9UF47 199 aa35.17■■■■□ 3.22
AC009533.2-201ENST00000543664 PABPN1Q86U42 306 aaKnown RBP eCLIP35.02■■■■□ 3.2
AC009533.2-201ENST00000543664 BICRAQ9NZM4 1560 aa34.91■■■■□ 3.18
AC009533.2-201ENST00000543664 SCRIBQ14160 1630 aa34.53■■■■□ 3.12
AC009533.2-201ENST00000543664 SHROOM4Q9ULL8 1493 aa34.24■■■■□ 3.07
AC009533.2-201ENST00000543664 CC2D2AQ9P2K1 1620 aa33.97■■■■□ 3.03
AC009533.2-201ENST00000543664 EIF4G1Q04637 1599 aaKnown RBP33.93■■■■□ 3.02
AC009533.2-201ENST00000543664 CECR2Q9BXF3 1484 aa33.76■■■■□ 3
AC009533.2-201ENST00000543664 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
AC009533.2-201ENST00000543664 SMARCA4P51532 1647 aa33.08■■■□□ 2.89
AC009533.2-201ENST00000543664 SMARCA2P51531 1590 aa32.9■■■□□ 2.86
AC009533.2-201ENST00000543664 MROH2BQ7Z745 1585 aa32.89■■■□□ 2.86
AC009533.2-201ENST00000543664 ATAD2BQ9ULI0 1458 aa32.89■■■□□ 2.86
AC009533.2-201ENST00000543664 NCAPD3P42695 1498 aa32.88■■■□□ 2.85
AC009533.2-201ENST00000543664 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
AC009533.2-201ENST00000543664 HMGXB3Q12766 1538 aa32.71■■■□□ 2.83
AC009533.2-201ENST00000543664 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
AC009533.2-201ENST00000543664 RSF1Q96T23 1441 aaPredicted RBP32.62■■■□□ 2.81
AC009533.2-201ENST00000543664 WIZO95785 1651 aa32.53■■■□□ 2.8
AC009533.2-201ENST00000543664 NESP48681 1621 aa32.44■■■□□ 2.78
AC009533.2-201ENST00000543664 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
AC009533.2-201ENST00000543664 TOP2AP11388 1531 aaKnown RBP32.24■■■□□ 2.75
AC009533.2-201ENST00000543664 CUX2O14529 1486 aa32.16■■■□□ 2.74
AC009533.2-201ENST00000543664 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
AC009533.2-201ENST00000543664 THOC2Q8NI27 1593 aaKnown RBP32.04■■■□□ 2.72
AC009533.2-201ENST00000543664 KIF21AQ7Z4S6 1674 aa32.02■■■□□ 2.72
AC009533.2-201ENST00000543664 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
AC009533.2-201ENST00000543664 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
AC009533.2-201ENST00000543664 DNAJC5Q9H3Z4 198 aa31.91■■■□□ 2.7
AC009533.2-201ENST00000543664 CCDC88BA6NC98 1476 aa31.86■■■□□ 2.69
AC009533.2-201ENST00000543664 PDS5BQ9NTI5 1447 aa31.8■■■□□ 2.68
AC009533.2-201ENST00000543664 CFTRP13569 1480 aa31.77■■■□□ 2.68
AC009533.2-201ENST00000543664 MRC2Q9UBG0 1479 aa31.59■■■□□ 2.65
AC009533.2-201ENST00000543664 WDR62O43379 1518 aa31.56■■■□□ 2.64
AC009533.2-201ENST00000543664 FANCD2Q9BXW9 1451 aa31.53■■■□□ 2.64
AC009533.2-201ENST00000543664 CEP164Q9UPV0 1460 aa31.5■■■□□ 2.63
AC009533.2-201ENST00000543664 PRDM2Q13029 1718 aa31.47■■■□□ 2.63
AC009533.2-201ENST00000543664 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
AC009533.2-201ENST00000543664 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
AC009533.2-201ENST00000543664 TOPBP1Q92547 1522 aa31.04■■■□□ 2.56
AC009533.2-201ENST00000543664 DNMBPQ6XZF7 1577 aa31.02■■■□□ 2.56
AC009533.2-201ENST00000543664 ZNF608Q9ULD9 1512 aaPredicted RBP30.95■■■□□ 2.55
AC009533.2-201ENST00000543664 IFT140Q96RY7 1462 aa30.85■■■□□ 2.53
AC009533.2-201ENST00000543664 CUX1P39880 1505 aa30.84■■■□□ 2.53
AC009533.2-201ENST00000543664 POLA1P09884 1462 aaPredicted RBP30.78■■■□□ 2.52
AC009533.2-201ENST00000543664 WRNQ14191 1432 aaPredicted RBP eCLIP30.78■■■□□ 2.52
AC009533.2-201ENST00000543664 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.51
AC009533.2-201ENST00000543664 EIF4G3O43432 1585 aaKnown RBP30.75■■■□□ 2.51
AC009533.2-201ENST00000543664 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
AC009533.2-201ENST00000543664 SOGA1O94964 1423 aa30.72■■■□□ 2.51
AC009533.2-201ENST00000543664 TOP2BQ02880 1626 aa30.65■■■□□ 2.5
AC009533.2-201ENST00000543664 OSCARQ8IYS5 282 aa30.65■■■□□ 2.5
AC009533.2-201ENST00000543664 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
AC009533.2-201ENST00000543664 RAD54L2Q9Y4B4 1467 aa30.63■■■□□ 2.49
AC009533.2-201ENST00000543664 TRIM41Q8WV44 630 aa30.63■■■□□ 2.49
AC009533.2-201ENST00000543664 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.49
AC009533.2-201ENST00000543664 SYNJ1O43426 1573 aa30.6■■■□□ 2.49
AC009533.2-201ENST00000543664 CHD1O14646 1710 aa30.53■■■□□ 2.48
AC009533.2-201ENST00000543664 WDR97A6NE52 1622 aa30.52■■■□□ 2.48
AC009533.2-201ENST00000543664 TDRD9Q8NDG6 1382 aaKnown RBP30.48■■■□□ 2.47
AC009533.2-201ENST00000543664 ABCA10Q8WWZ4 1543 aa30.47■■■□□ 2.47
AC009533.2-201ENST00000543664 RIMBP3CA6NJZ7 1639 aa30.46■■■□□ 2.47
AC009533.2-201ENST00000543664 RIMBP3BA6NNM3 1639 aa30.46■■■□□ 2.47
AC009533.2-201ENST00000543664 RIMBP3Q9UFD9 1639 aa30.46■■■□□ 2.47
AC009533.2-201ENST00000543664 GAPVD1Q14C86 1478 aa30.35■■■□□ 2.45
AC009533.2-201ENST00000543664 ARHGEF11O15085 1522 aa30.34■■■□□ 2.45
AC009533.2-201ENST00000543664 GRIN2BQ13224 1484 aa30.33■■■□□ 2.45
AC009533.2-201ENST00000543664 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
AC009533.2-201ENST00000543664 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
AC009533.2-201ENST00000543664 FBLN2P98095 1184 aa30.23■■■□□ 2.43
AC009533.2-201ENST00000543664 MAGI1Q96QZ7 1491 aaPredicted RBP30.23■■■□□ 2.43
AC009533.2-201ENST00000543664 PBRM1Q86U86 1689 aa30.21■■■□□ 2.43
AC009533.2-201ENST00000543664 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
AC009533.2-201ENST00000543664 ERICH3Q5RHP9 1530 aa30.13■■■□□ 2.41
AC009533.2-201ENST00000543664 CLASP1Q7Z460 1538 aa30.13■■■□□ 2.41
AC009533.2-201ENST00000543664 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
AC009533.2-201ENST00000543664 ARAP1Q96P48 1450 aa30.11■■■□□ 2.41
AC009533.2-201ENST00000543664 SYNJ2O15056 1496 aa30.1■■■□□ 2.41
AC009533.2-201ENST00000543664 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
AC009533.2-201ENST00000543664 CYB5RLQ6IPT4 315 aa30.01■■■□□ 2.39
AC009533.2-201ENST00000543664 IGF1RP08069 1367 aa29.99■■■□□ 2.39
AC009533.2-201ENST00000543664 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
AC009533.2-201ENST00000543664 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
AC009533.2-201ENST00000543664 GRIN2AQ12879 1464 aa29.91■■■□□ 2.38
AC009533.2-201ENST00000543664 CUL7Q14999 1698 aa29.88■■■□□ 2.37
AC009533.2-201ENST00000543664 CARMIL1Q5VZK9 1371 aa29.83■■■□□ 2.37
AC009533.2-201ENST00000543664 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
AC009533.2-201ENST00000543664 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
AC009533.2-201ENST00000543664 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
AC009533.2-201ENST00000543664 NUP160Q12769 1436 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms