RNA–Protein interactions for RNA: ENST00000564428.5

PML-211, Transcript of promyelocytic leukemia, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PML, Length 1,985 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-211ENST00000564428 NISCHQ9Y2I1 1504 aa40.66■■■■■ 4.1
PML-211ENST00000564428 CCDC180Q9P1Z9 1646 aa35.58■■■■□ 3.29
PML-211ENST00000564428 ZCCHC6Q5VYS8 1495 aaKnown RBP34.14■■■■□ 3.06
PML-211ENST00000564428 ABCC9O60706 1549 aa33.92■■■■□ 3.02
PML-211ENST00000564428 DCAF8L2P0C7V8 631 aa33.8■■■■□ 3
PML-211ENST00000564428 DCAF1Q9Y4B6 1507 aa33.56■■■□□ 2.96
PML-211ENST00000564428 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
PML-211ENST00000564428 MYO15BQ96JP2 1530 aa33.31■■■□□ 2.92
PML-211ENST00000564428 NACADO15069 1562 aa33.21■■■□□ 2.91
PML-211ENST00000564428 RB1CC1Q8TDY2 1594 aa33.01■■■□□ 2.87
PML-211ENST00000564428 SCRIBQ14160 1630 aa32.63■■■□□ 2.81
PML-211ENST00000564428 UNC13AQ9UPW8 1703 aa32.41■■■□□ 2.78
PML-211ENST00000564428 SUPT5HO00267 1087 aaKnown RBP32.09■■■□□ 2.73
PML-211ENST00000564428 BICRAQ9NZM4 1560 aa32.05■■■□□ 2.72
PML-211ENST00000564428 PABPN1Q86U42 306 aaKnown RBP eCLIP31.89■■■□□ 2.7
PML-211ENST00000564428 CECR2Q9BXF3 1484 aa31.71■■■□□ 2.67
PML-211ENST00000564428 RSF1Q96T23 1441 aaPredicted RBP31.62■■■□□ 2.65
PML-211ENST00000564428 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
PML-211ENST00000564428 BAZ1AQ9NRL2 1556 aaPredicted RBP31.35■■■□□ 2.61
PML-211ENST00000564428 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
PML-211ENST00000564428 WIZO95785 1651 aa31.17■■■□□ 2.58
PML-211ENST00000564428 EIF4G1Q04637 1599 aaKnown RBP31.09■■■□□ 2.57
PML-211ENST00000564428 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
PML-211ENST00000564428 ATAD2BQ9ULI0 1458 aa30.83■■■□□ 2.53
PML-211ENST00000564428 SMARCA2P51531 1590 aa30.81■■■□□ 2.52
PML-211ENST00000564428 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
PML-211ENST00000564428 CC2D2AQ9P2K1 1620 aa30.73■■■□□ 2.51
PML-211ENST00000564428 CHIC1Q5VXU3 224 aa30.68■■■□□ 2.5
PML-211ENST00000564428 NCAPD3P42695 1498 aa30.64■■■□□ 2.5
PML-211ENST00000564428 BAZ1BQ9UIG0 1483 aaKnown RBP30.62■■■□□ 2.49
PML-211ENST00000564428 CCDC88BA6NC98 1476 aa30.59■■■□□ 2.49
PML-211ENST00000564428 HMGXB3Q12766 1538 aa30.58■■■□□ 2.49
PML-211ENST00000564428 DNAJC5BQ9UF47 199 aa30.28■■■□□ 2.44
PML-211ENST00000564428 TRIM41Q8WV44 630 aa30.12■■■□□ 2.41
PML-211ENST00000564428 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
PML-211ENST00000564428 CFTRP13569 1480 aa29.85■■■□□ 2.37
PML-211ENST00000564428 CADPSQ9ULU8 1353 aa29.81■■■□□ 2.36
PML-211ENST00000564428 PRDM2Q13029 1718 aa29.75■■■□□ 2.35
PML-211ENST00000564428 WRNQ14191 1432 aaPredicted RBP eCLIP29.72■■■□□ 2.35
PML-211ENST00000564428 NESP48681 1621 aa29.68■■■□□ 2.34
PML-211ENST00000564428 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
PML-211ENST00000564428 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
PML-211ENST00000564428 LOC105371045A0A1W2PR82 267 aa29.6■■■□□ 2.33
PML-211ENST00000564428 SYNJ1O43426 1573 aa29.58■■■□□ 2.33
PML-211ENST00000564428 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
PML-211ENST00000564428 SOGA1O94964 1423 aa29.44■■■□□ 2.3
PML-211ENST00000564428 PDS5BQ9NTI5 1447 aa29.42■■■□□ 2.3
PML-211ENST00000564428 TOP2BQ02880 1626 aa29.41■■■□□ 2.3
PML-211ENST00000564428 CUX1P39880 1505 aa29.41■■■□□ 2.3
PML-211ENST00000564428 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
PML-211ENST00000564428 RUSC2Q8N2Y8 1516 aa29.34■■■□□ 2.29
PML-211ENST00000564428 CEP164Q9UPV0 1460 aa29.33■■■□□ 2.29
PML-211ENST00000564428 BIVM-ERCC5R4GMW8 1640 aa29.33■■■□□ 2.29
PML-211ENST00000564428 EHMT2Q96KQ7 1210 aa29.31■■■□□ 2.28
PML-211ENST00000564428 EEA1Q15075 1411 aa29.2■■■□□ 2.26
PML-211ENST00000564428 CSRNP3Q8WYN3 585 aa29.19■■■□□ 2.26
PML-211ENST00000564428 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
PML-211ENST00000564428 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
PML-211ENST00000564428 TOPBP1Q92547 1522 aa29.13■■■□□ 2.25
PML-211ENST00000564428 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
PML-211ENST00000564428 FGD5Q6ZNL6 1462 aa29.08■■■□□ 2.25
PML-211ENST00000564428 MRC2Q9UBG0 1479 aa29.07■■■□□ 2.24
PML-211ENST00000564428 THOC2Q8NI27 1593 aaKnown RBP28.97■■■□□ 2.23
PML-211ENST00000564428 POLA1P09884 1462 aaPredicted RBP28.96■■■□□ 2.23
PML-211ENST00000564428 WDR62O43379 1518 aa28.96■■■□□ 2.23
PML-211ENST00000564428 KIF27Q86VH2 1401 aa28.95■■■□□ 2.22
PML-211ENST00000564428 RAD54L2Q9Y4B4 1467 aa28.92■■■□□ 2.22
PML-211ENST00000564428 CUX2O14529 1486 aa28.91■■■□□ 2.22
PML-211ENST00000564428 GOLGA3Q08378 1498 aa28.84■■■□□ 2.21
PML-211ENST00000564428 UBTFP17480 764 aaKnown RBP28.84■■■□□ 2.21
PML-211ENST00000564428 KIF21BO75037 1637 aa28.81■■■□□ 2.2
PML-211ENST00000564428 RAPGEF2Q9Y4G8 1499 aa28.8■■■□□ 2.2
PML-211ENST00000564428 TNIKQ9UKE5 1360 aa28.8■■■□□ 2.2
PML-211ENST00000564428 ABCA10Q8WWZ4 1543 aa28.8■■■□□ 2.2
PML-211ENST00000564428 IGF1RP08069 1367 aa28.78■■■□□ 2.2
PML-211ENST00000564428 PRXQ9BXM0 1461 aa28.77■■■□□ 2.2
PML-211ENST00000564428 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
PML-211ENST00000564428 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
PML-211ENST00000564428 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
PML-211ENST00000564428 CEP162Q5TB80 1403 aa28.66■■■□□ 2.18
PML-211ENST00000564428 IFT140Q96RY7 1462 aa28.65■■■□□ 2.18
PML-211ENST00000564428 ERICH3Q5RHP9 1530 aa28.62■■■□□ 2.17
PML-211ENST00000564428 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
PML-211ENST00000564428 ABCA5Q8WWZ7 1642 aa28.6■■■□□ 2.17
PML-211ENST00000564428 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
PML-211ENST00000564428 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
PML-211ENST00000564428 PCGF6Q9BYE7 350 aa28.49■■■□□ 2.15
PML-211ENST00000564428 RANGAP1P46060 587 aaPredicted RBP28.48■■■□□ 2.15
PML-211ENST00000564428 AQRO60306 1485 aaKnown RBP eCLIP28.48■■■□□ 2.151e-6■■■■■ 29.8
PML-211ENST00000564428 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
PML-211ENST00000564428 CLIP1P30622 1438 aa28.44■■■□□ 2.14
PML-211ENST00000564428 EIF4G3O43432 1585 aaKnown RBP28.43■■■□□ 2.14
PML-211ENST00000564428 CUL7Q14999 1698 aa28.38■■■□□ 2.13
PML-211ENST00000564428 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
PML-211ENST00000564428 TRIM26Q12899 539 aaPredicted RBP28.34■■■□□ 2.13
PML-211ENST00000564428 PPARGC1BQ86YN6 1023 aaKnown RBP28.25■■■□□ 2.11
PML-211ENST00000564428 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
PML-211ENST00000564428 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
PML-211ENST00000564428 FHAD1B1AJZ9 1412 aa28.2■■■□□ 2.11
PML-211ENST00000564428 HRCP23327 699 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms