RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 NISCHQ9Y2I1 1504 aa33.95■■■■□ 3.03
TNFAIP2-201ENST00000333007 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
TNFAIP2-201ENST00000333007 SHROOM4Q9ULL8 1493 aa31.2■■■□□ 2.58
TNFAIP2-201ENST00000333007 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
TNFAIP2-201ENST00000333007 PCGF6Q9BYE7 350 aa29.53■■■□□ 2.32
TNFAIP2-201ENST00000333007 EHMT2Q96KQ7 1210 aa29.44■■■□□ 2.3
TNFAIP2-201ENST00000333007 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
TNFAIP2-201ENST00000333007 FAM9AQ8IZU1 332 aaPredicted RBP29.13■■■□□ 2.25
TNFAIP2-201ENST00000333007 HRCP23327 699 aa28.83■■■□□ 2.21
TNFAIP2-201ENST00000333007 LOC105371045A0A1W2PR82 267 aa28.83■■■□□ 2.21
TNFAIP2-201ENST00000333007 TRIM41Q8WV44 630 aa28.78■■■□□ 2.2
TNFAIP2-201ENST00000333007 PPARGC1BQ86YN6 1023 aaKnown RBP28.51■■■□□ 2.15
TNFAIP2-201ENST00000333007 TTBK1Q5TCY1 1321 aaPredicted RBP28.47■■■□□ 2.15
TNFAIP2-201ENST00000333007 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
TNFAIP2-201ENST00000333007 TRIM26Q12899 539 aaPredicted RBP28.4■■■□□ 2.14
TNFAIP2-201ENST00000333007 ZEB1P37275 1124 aaPredicted RBP28.24■■■□□ 2.11
TNFAIP2-201ENST00000333007 CCER1Q8TC90 406 aaPredicted RBP28.08■■■□□ 2.09
TNFAIP2-201ENST00000333007 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
TNFAIP2-201ENST00000333007 CCDC180Q9P1Z9 1646 aa27.94■■■□□ 2.06
TNFAIP2-201ENST00000333007 UBTFP17480 764 aaKnown RBP27.86■■■□□ 2.05
TNFAIP2-201ENST00000333007 RANGAP1P46060 587 aaPredicted RBP27.86■■■□□ 2.05
TNFAIP2-201ENST00000333007 APLP2Q06481 763 aa27.85■■■□□ 2.05
TNFAIP2-201ENST00000333007 ABCC9O60706 1549 aa27.71■■■□□ 2.03
TNFAIP2-201ENST00000333007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.6■■■□□ 2.01
TNFAIP2-201ENST00000333007 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
TNFAIP2-201ENST00000333007 CENPBP07199 599 aaPredicted RBP27.52■■■□□ 2
TNFAIP2-201ENST00000333007 SCRIBQ14160 1630 aa27.5■■□□□ 1.99
TNFAIP2-201ENST00000333007 YTHDC1Q96MU7 727 aaKnown RBP27.43■■□□□ 1.98
TNFAIP2-201ENST00000333007 PELP1Q8IZL8 1130 aaKnown RBP27.43■■□□□ 1.98
TNFAIP2-201ENST00000333007 HNRNPUL2Q1KMD3 747 aaKnown RBP27.27■■□□□ 1.96
TNFAIP2-201ENST00000333007 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
TNFAIP2-201ENST00000333007 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
TNFAIP2-201ENST00000333007 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
TNFAIP2-201ENST00000333007 ATP1B4Q9UN42 357 aaPredicted RBP27.01■■□□□ 1.91
TNFAIP2-201ENST00000333007 CSRNP3Q8WYN3 585 aa26.91■■□□□ 1.9
TNFAIP2-201ENST00000333007 ITGAEP38570 1179 aa26.9■■□□□ 1.9
TNFAIP2-201ENST00000333007 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
TNFAIP2-201ENST00000333007 GTF3C3Q9Y5Q9 886 aa26.76■■□□□ 1.88
TNFAIP2-201ENST00000333007 RB1CC1Q8TDY2 1594 aa26.72■■□□□ 1.87
TNFAIP2-201ENST00000333007 ACIN1Q9UKV3 1341 aaKnown RBP26.68■■□□□ 1.86
TNFAIP2-201ENST00000333007 ZNF316A6NFI3 1004 aaPredicted RBP26.65■■□□□ 1.86
TNFAIP2-201ENST00000333007 SCAF1Q9H7N4 1312 aaKnown RBP26.62■■□□□ 1.85
TNFAIP2-201ENST00000333007 NEUROD1Q13562 356 aa26.52■■□□□ 1.84
TNFAIP2-201ENST00000333007 NACADO15069 1562 aa26.51■■□□□ 1.83
TNFAIP2-201ENST00000333007 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
TNFAIP2-201ENST00000333007 MYT1Q01538 1121 aa26.45■■□□□ 1.82
TNFAIP2-201ENST00000333007 CEP162Q5TB80 1403 aa26.43■■□□□ 1.82
TNFAIP2-201ENST00000333007 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
TNFAIP2-201ENST00000333007 ERICH6Q7L0X2 663 aa26.26■■□□□ 1.79
TNFAIP2-201ENST00000333007 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
TNFAIP2-201ENST00000333007 SOGA1O94964 1423 aa26.26■■□□□ 1.79
TNFAIP2-201ENST00000333007 NEFLP07196 543 aa26.26■■□□□ 1.79
TNFAIP2-201ENST00000333007 TNIKQ9UKE5 1360 aa26.22■■□□□ 1.79
TNFAIP2-201ENST00000333007 WIZO95785 1651 aa26.22■■□□□ 1.79
TNFAIP2-201ENST00000333007 CLIP1P30622 1438 aa26.2■■□□□ 1.78
TNFAIP2-201ENST00000333007 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
TNFAIP2-201ENST00000333007 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
TNFAIP2-201ENST00000333007 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
TNFAIP2-201ENST00000333007 MIER1Q8N108 512 aa26.16■■□□□ 1.78
TNFAIP2-201ENST00000333007 GOLGA3Q08378 1498 aa26.14■■□□□ 1.78
TNFAIP2-201ENST00000333007 EEA1Q15075 1411 aa26.14■■□□□ 1.78
TNFAIP2-201ENST00000333007 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
TNFAIP2-201ENST00000333007 BCANQ96GW7 911 aa26.03■■□□□ 1.76
TNFAIP2-201ENST00000333007 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
TNFAIP2-201ENST00000333007 CNGB1Q14028 1251 aaPredicted RBP25.88■■□□□ 1.73
TNFAIP2-201ENST00000333007 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
TNFAIP2-201ENST00000333007 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.73
TNFAIP2-201ENST00000333007 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
TNFAIP2-201ENST00000333007 POLR3GLQ9BT43 218 aa25.81■■□□□ 1.72
TNFAIP2-201ENST00000333007 TRIM52Q96A61 297 aa25.76■■□□□ 1.71
TNFAIP2-201ENST00000333007 DDX10Q13206 875 aaKnown RBP25.74■■□□□ 1.71
TNFAIP2-201ENST00000333007 ANP32CO43423 234 aa25.73■■□□□ 1.71
TNFAIP2-201ENST00000333007 VPS8Q8N3P4 1428 aa25.66■■□□□ 1.7
TNFAIP2-201ENST00000333007 ARID3CA6NKF2 412 aa25.66■■□□□ 1.7
TNFAIP2-201ENST00000333007 HIRIP3Q9BW71 556 aaPredicted RBP25.65■■□□□ 1.7
TNFAIP2-201ENST00000333007 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
TNFAIP2-201ENST00000333007 KANK4Q5T7N3 995 aaPredicted RBP25.6■■□□□ 1.69
TNFAIP2-201ENST00000333007 KIF27Q86VH2 1401 aa25.56■■□□□ 1.68
TNFAIP2-201ENST00000333007 FKBP8Q14318 412 aa25.54■■□□□ 1.68
TNFAIP2-201ENST00000333007 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
TNFAIP2-201ENST00000333007 RAPGEF2Q9Y4G8 1499 aa25.5■■□□□ 1.67
TNFAIP2-201ENST00000333007 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
TNFAIP2-201ENST00000333007 SIN3AQ96ST3 1273 aa25.44■■□□□ 1.66
TNFAIP2-201ENST00000333007 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
TNFAIP2-201ENST00000333007 ZNF326Q5BKZ1 582 aaKnown RBP25.41■■□□□ 1.66
TNFAIP2-201ENST00000333007 CCNB3Q8WWL7 1395 aa25.41■■□□□ 1.66
TNFAIP2-201ENST00000333007 CHIC2Q9UKJ5 165 aa25.41■■□□□ 1.66
TNFAIP2-201ENST00000333007 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
TNFAIP2-201ENST00000333007 MTUS2Q5JR59 1369 aa25.32■■□□□ 1.64
TNFAIP2-201ENST00000333007 HNRNPUQ00839 825 aaKnown RBP eCLIP25.31■■□□□ 1.64
TNFAIP2-201ENST00000333007 CUX2O14529 1486 aa25.28■■□□□ 1.64
TNFAIP2-201ENST00000333007 SUPT16HQ9Y5B9 1047 aaKnown RBP25.25■■□□□ 1.63
TNFAIP2-201ENST00000333007 FBLN2P98095 1184 aa25.23■■□□□ 1.63
TNFAIP2-201ENST00000333007 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
TNFAIP2-201ENST00000333007 RRP7BPQ9NSQ0 103 aa25.22■■□□□ 1.63
TNFAIP2-201ENST00000333007 CDK11AQ9UQ88 783 aaPredicted RBP25.21■■□□□ 1.63
TNFAIP2-201ENST00000333007 DHX57Q6P158 1386 aaKnown RBP25.2■■□□□ 1.62
TNFAIP2-201ENST00000333007 ZNF777Q9ULD5 760 aaPredicted RBP25.18■■□□□ 1.62
TNFAIP2-201ENST00000333007 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
TNFAIP2-201ENST00000333007 FAM9BQ8IZU0 186 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms