RNA–Protein interactions for RNA: ENST00000436100.1

TPM4P1-201, Transcript of tropomyosin 4 pseudogene 1, humanhuman

BASIC

Gene TPM4P1, Length 807 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P1-201ENST00000436100 NISCHQ9Y2I1 1504 aa45.47■■■■■ 4.87
TPM4P1-201ENST00000436100 ABCC9O60706 1549 aa42.3■■■■■ 4.36
TPM4P1-201ENST00000436100 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
TPM4P1-201ENST00000436100 DNAJC5BQ9UF47 199 aa40.62■■■■■ 4.09
TPM4P1-201ENST00000436100 RB1CC1Q8TDY2 1594 aa39.74■■■■□ 3.95
TPM4P1-201ENST00000436100 PABPN1Q86U42 306 aaKnown RBP eCLIP39.3■■■■□ 3.88
TPM4P1-201ENST00000436100 NACADO15069 1562 aa39.22■■■■□ 3.87
TPM4P1-201ENST00000436100 DCAF8L2P0C7V8 631 aa39.02■■■■□ 3.84
TPM4P1-201ENST00000436100 UNC13AQ9UPW8 1703 aa38.74■■■■□ 3.79
TPM4P1-201ENST00000436100 BICRAQ9NZM4 1560 aa38.6■■■■□ 3.77
TPM4P1-201ENST00000436100 MYO15BQ96JP2 1530 aa38.31■■■■□ 3.72
TPM4P1-201ENST00000436100 CECR2Q9BXF3 1484 aa38.21■■■■□ 3.71
TPM4P1-201ENST00000436100 CC2D2AQ9P2K1 1620 aa38.09■■■■□ 3.69
TPM4P1-201ENST00000436100 DNAJC5Q9H3Z4 198 aa38.04■■■■□ 3.68
TPM4P1-201ENST00000436100 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
TPM4P1-201ENST00000436100 EIF4G1Q04637 1599 aaKnown RBP37.76■■■■□ 3.64
TPM4P1-201ENST00000436100 SCRIBQ14160 1630 aa37.53■■■■□ 3.6
TPM4P1-201ENST00000436100 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
TPM4P1-201ENST00000436100 DCAF1Q9Y4B6 1507 aa37.45■■■■□ 3.59
TPM4P1-201ENST00000436100 CUX2O14529 1486 aa36.82■■■■□ 3.49
TPM4P1-201ENST00000436100 ERCC6Q03468 1493 aa36.61■■■■□ 3.45
TPM4P1-201ENST00000436100 NCAPD3P42695 1498 aa36.25■■■■□ 3.39
TPM4P1-201ENST00000436100 NESP48681 1621 aa36.03■■■■□ 3.36
TPM4P1-201ENST00000436100 TRIM41Q8WV44 630 aa36.02■■■■□ 3.36
TPM4P1-201ENST00000436100 ATAD2BQ9ULI0 1458 aa36.01■■■■□ 3.36
TPM4P1-201ENST00000436100 HMGXB3Q12766 1538 aa35.83■■■■□ 3.33
TPM4P1-201ENST00000436100 SMARCA2P51531 1590 aa35.82■■■■□ 3.32
TPM4P1-201ENST00000436100 THOC2Q8NI27 1593 aaKnown RBP35.78■■■■□ 3.32
TPM4P1-201ENST00000436100 SMARCA4P51532 1647 aa35.66■■■■□ 3.3
TPM4P1-201ENST00000436100 BAZ1BQ9UIG0 1483 aaKnown RBP35.61■■■■□ 3.29
TPM4P1-201ENST00000436100 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
TPM4P1-201ENST00000436100 PDS5BQ9NTI5 1447 aa35.46■■■■□ 3.27
TPM4P1-201ENST00000436100 KIF21AQ7Z4S6 1674 aa35.43■■■■□ 3.26
TPM4P1-201ENST00000436100 BAZ1AQ9NRL2 1556 aaPredicted RBP35.36■■■■□ 3.25
TPM4P1-201ENST00000436100 PEG3Q9GZU2 1588 aa35.3■■■■□ 3.24
TPM4P1-201ENST00000436100 MRC2Q9UBG0 1479 aa35.19■■■■□ 3.22
TPM4P1-201ENST00000436100 CADPSQ9ULU8 1353 aa35.14■■■■□ 3.22
TPM4P1-201ENST00000436100 WDR62O43379 1518 aa35.1■■■■□ 3.21
TPM4P1-201ENST00000436100 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
TPM4P1-201ENST00000436100 MROH2BQ7Z745 1585 aa35.04■■■■□ 3.2
TPM4P1-201ENST00000436100 CEP164Q9UPV0 1460 aa34.84■■■■□ 3.17
TPM4P1-201ENST00000436100 FANCD2Q9BXW9 1451 aa34.73■■■■□ 3.15
TPM4P1-201ENST00000436100 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
TPM4P1-201ENST00000436100 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
TPM4P1-201ENST00000436100 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
TPM4P1-201ENST00000436100 WIZO95785 1651 aa34.55■■■■□ 3.12
TPM4P1-201ENST00000436100 CFTRP13569 1480 aa34.49■■■■□ 3.11
TPM4P1-201ENST00000436100 URB2Q14146 1524 aaKnown RBP34.49■■■■□ 3.11
TPM4P1-201ENST00000436100 ARHGEF11O15085 1522 aa34.43■■■■□ 3.1
TPM4P1-201ENST00000436100 CYB5RLQ6IPT4 315 aa34.35■■■■□ 3.09
TPM4P1-201ENST00000436100 TRHP20396 242 aaPredicted RBP34.32■■■■□ 3.08
TPM4P1-201ENST00000436100 ZNF608Q9ULD9 1512 aaPredicted RBP34.25■■■■□ 3.07
TPM4P1-201ENST00000436100 IFT140Q96RY7 1462 aa34.2■■■■□ 3.06
TPM4P1-201ENST00000436100 AEBP2Q6ZN18 517 aaPredicted RBP34.08■■■■□ 3.05
TPM4P1-201ENST00000436100 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
TPM4P1-201ENST00000436100 ARAP1Q96P48 1450 aa34.03■■■■□ 3.04
TPM4P1-201ENST00000436100 RSF1Q96T23 1441 aaPredicted RBP33.97■■■■□ 3.03
TPM4P1-201ENST00000436100 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
TPM4P1-201ENST00000436100 EIF4G3O43432 1585 aaKnown RBP33.94■■■■□ 3.02
TPM4P1-201ENST00000436100 PRDM2Q13029 1718 aa33.91■■■■□ 3.02
TPM4P1-201ENST00000436100 FBLN2P98095 1184 aa33.91■■■■□ 3.02
TPM4P1-201ENST00000436100 CHD1O14646 1710 aa33.86■■■■□ 3.01
TPM4P1-201ENST00000436100 AQRO60306 1485 aaKnown RBP eCLIP33.84■■■■□ 3.01
TPM4P1-201ENST00000436100 ABCC8Q09428 1581 aa33.8■■■■□ 3
TPM4P1-201ENST00000436100 CCDC88BA6NC98 1476 aa33.72■■■□□ 2.99
TPM4P1-201ENST00000436100 DNMBPQ6XZF7 1577 aa33.69■■■□□ 2.98
TPM4P1-201ENST00000436100 TARBP1Q13395 1621 aaKnown RBP33.67■■■□□ 2.98
TPM4P1-201ENST00000436100 POLA1P09884 1462 aaPredicted RBP33.53■■■□□ 2.96
TPM4P1-201ENST00000436100 TDRD9Q8NDG6 1382 aaKnown RBP33.49■■■□□ 2.95
TPM4P1-201ENST00000436100 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
TPM4P1-201ENST00000436100 RAD54L2Q9Y4B4 1467 aa33.47■■■□□ 2.95
TPM4P1-201ENST00000436100 CHMP7Q8WUX9 453 aaPredicted RBP33.46■■■□□ 2.95
TPM4P1-201ENST00000436100 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
TPM4P1-201ENST00000436100 SOGA1O94964 1423 aa33.41■■■□□ 2.94
TPM4P1-201ENST00000436100 SYNJ1O43426 1573 aa33.39■■■□□ 2.94
TPM4P1-201ENST00000436100 MAGI1Q96QZ7 1491 aaPredicted RBP33.28■■■□□ 2.92
TPM4P1-201ENST00000436100 GAPVD1Q14C86 1478 aa33.26■■■□□ 2.92
TPM4P1-201ENST00000436100 WDR97A6NE52 1622 aa33.22■■■□□ 2.91
TPM4P1-201ENST00000436100 SYNJ2O15056 1496 aa33.2■■■□□ 2.91
TPM4P1-201ENST00000436100 GRIN2BQ13224 1484 aa33.2■■■□□ 2.91
TPM4P1-201ENST00000436100 FGD5Q6ZNL6 1462 aa33.18■■■□□ 2.9
TPM4P1-201ENST00000436100 CUX1P39880 1505 aa32.97■■■□□ 2.87
TPM4P1-201ENST00000436100 ERCC6L2Q5T890 1561 aa32.92■■■□□ 2.86
TPM4P1-201ENST00000436100 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
TPM4P1-201ENST00000436100 CEP170Q5SW79 1584 aa32.76■■■□□ 2.84
TPM4P1-201ENST00000436100 GRIN2AQ12879 1464 aa32.76■■■□□ 2.84
TPM4P1-201ENST00000436100 ABCA10Q8WWZ4 1543 aa32.73■■■□□ 2.83
TPM4P1-201ENST00000436100 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
TPM4P1-201ENST00000436100 KIF13AQ9H1H9 1805 aa32.7■■■□□ 2.83
TPM4P1-201ENST00000436100 NUP160Q12769 1436 aa32.68■■■□□ 2.82
TPM4P1-201ENST00000436100 ILDR1Q86SU0 546 aaPredicted RBP32.67■■■□□ 2.82
TPM4P1-201ENST00000436100 FAM69CQ0P6D2 419 aa32.62■■■□□ 2.81
TPM4P1-201ENST00000436100 SHROOM2Q13796 1616 aa32.59■■■□□ 2.81
TPM4P1-201ENST00000436100 KDM4FA0A1W2PPD8 638 aa32.58■■■□□ 2.81
TPM4P1-201ENST00000436100 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
TPM4P1-201ENST00000436100 ABCC10Q5T3U5 1492 aa32.51■■■□□ 2.79
TPM4P1-201ENST00000436100 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.79
TPM4P1-201ENST00000436100 PRG4Q92954 1404 aaPredicted RBP32.51■■■□□ 2.79
TPM4P1-201ENST00000436100 NPM1P06748 294 aaKnown RBP eCLIP32.48■■■□□ 2.79
TPM4P1-201ENST00000436100 WRNQ14191 1432 aaPredicted RBP eCLIP32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms