Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NOTCH4Q99466 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.39■□□□□ 0.54
NOTCH4Q99466 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
NOTCH4Q99466 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NOTCH4Q99466 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NOTCH4Q99466 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 AC019129.2-201ENST00000609837 1235 ntBASIC18.39■□□□□ 0.53
NOTCH4Q99466 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOTCH4Q99466 CRYGEP-201ENST00000412192 528 ntBASIC18.39■□□□□ 0.53
NOTCH4Q99466 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.39■□□□□ 0.53
NOTCH4Q99466 AC064836.3-201ENST00000607928 673 ntBASIC18.39■□□□□ 0.53
NOTCH4Q99466 AL049757.1-201ENST00000616842 1596 ntBASIC18.38■□□□□ 0.53
NOTCH4Q99466 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.38■□□□□ 0.53
NOTCH4Q99466 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOTCH4Q99466 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 AC211486.1-202ENST00000416371 468 ntBASIC18.37■□□□□ 0.53
NOTCH4Q99466 AC211476.1-201ENST00000503899 468 ntBASIC18.37■□□□□ 0.53
NOTCH4Q99466 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 AC093677.2-201ENST00000600169 1863 ntBASIC18.37■□□□□ 0.53
NOTCH4Q99466 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 DUTP2-201ENST00000519164 463 ntBASIC18.37■□□□□ 0.53
NOTCH4Q99466 AC027796.2-201ENST00000575326 344 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms