RNA–Protein interactions for RNA: ENST00000451024.4

NKX1-2-201, Transcript of NK1 homeobox 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX1-2, Length 3,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2-201ENST00000451024 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
NKX1-2-201ENST00000451024 CCDC180Q9P1Z9 1646 aa34.99■■■■□ 3.19
NKX1-2-201ENST00000451024 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
NKX1-2-201ENST00000451024 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
NKX1-2-201ENST00000451024 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
NKX1-2-201ENST00000451024 ABCC9O60706 1549 aa33.44■■■□□ 2.94
NKX1-2-201ENST00000451024 HRCP23327 699 aa33.42■■■□□ 2.94
NKX1-2-201ENST00000451024 PPARGC1BQ86YN6 1023 aaKnown RBP33.39■■■□□ 2.94
NKX1-2-201ENST00000451024 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
NKX1-2-201ENST00000451024 PCGF6Q9BYE7 350 aa33.11■■■□□ 2.89
NKX1-2-201ENST00000451024 PELP1Q8IZL8 1130 aaKnown RBP32.84■■■□□ 2.85
NKX1-2-201ENST00000451024 MYO15BQ96JP2 1530 aa32.78■■■□□ 2.84
NKX1-2-201ENST00000451024 SUPT5HO00267 1087 aaKnown RBP32.78■■■□□ 2.84
NKX1-2-201ENST00000451024 NACADO15069 1562 aa32.68■■■□□ 2.82
NKX1-2-201ENST00000451024 SCRIBQ14160 1630 aa32.64■■■□□ 2.82
NKX1-2-201ENST00000451024 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
NKX1-2-201ENST00000451024 SCAF1Q9H7N4 1312 aaKnown RBP32.16■■■□□ 2.74
NKX1-2-201ENST00000451024 PABPN1Q86U42 306 aaKnown RBP eCLIP31.79■■■□□ 2.68
NKX1-2-201ENST00000451024 CECR2Q9BXF3 1484 aa31.75■■■□□ 2.67
NKX1-2-201ENST00000451024 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
NKX1-2-201ENST00000451024 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
NKX1-2-201ENST00000451024 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
NKX1-2-201ENST00000451024 MYT1Q01538 1121 aa31.57■■■□□ 2.65
NKX1-2-201ENST00000451024 LOC105371045A0A1W2PR82 267 aa31.53■■■□□ 2.64
NKX1-2-201ENST00000451024 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.63
NKX1-2-201ENST00000451024 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
NKX1-2-201ENST00000451024 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
NKX1-2-201ENST00000451024 TRIM26Q12899 539 aaPredicted RBP31.28■■■□□ 2.6
NKX1-2-201ENST00000451024 WIZO95785 1651 aa31.24■■■□□ 2.59
NKX1-2-201ENST00000451024 GTF3C3Q9Y5Q9 886 aa31.21■■■□□ 2.59
NKX1-2-201ENST00000451024 NEUROD1Q13562 356 aa31.19■■■□□ 2.58
NKX1-2-201ENST00000451024 SMARCA4P51532 1647 aa31.13■■■□□ 2.57
NKX1-2-201ENST00000451024 ACIN1Q9UKV3 1341 aaKnown RBP31.08■■■□□ 2.57
NKX1-2-201ENST00000451024 ZEB1P37275 1124 aaPredicted RBP31.02■■■□□ 2.56
NKX1-2-201ENST00000451024 EHMT2Q96KQ7 1210 aa30.97■■■□□ 2.55
NKX1-2-201ENST00000451024 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
NKX1-2-201ENST00000451024 CENPBP07199 599 aaPredicted RBP30.77■■■□□ 2.52
NKX1-2-201ENST00000451024 YTHDC1Q96MU7 727 aaKnown RBP30.72■■■□□ 2.51
NKX1-2-201ENST00000451024 ATAD2BQ9ULI0 1458 aa30.65■■■□□ 2.5
NKX1-2-201ENST00000451024 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
NKX1-2-201ENST00000451024 TRIM41Q8WV44 630 aa30.64■■■□□ 2.5
NKX1-2-201ENST00000451024 PEG3Q9GZU2 1588 aa30.57■■■□□ 2.48
NKX1-2-201ENST00000451024 SMARCA2P51531 1590 aa30.55■■■□□ 2.48
NKX1-2-201ENST00000451024 EIF4G1Q04637 1599 aaKnown RBP30.53■■■□□ 2.48
NKX1-2-201ENST00000451024 BAZ1BQ9UIG0 1483 aaKnown RBP30.53■■■□□ 2.48
NKX1-2-201ENST00000451024 FAM9AQ8IZU1 332 aaPredicted RBP30.52■■■□□ 2.48
NKX1-2-201ENST00000451024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.48■■■□□ 2.47
NKX1-2-201ENST00000451024 DIEXFQ68CQ4 756 aaKnown RBP30.46■■■□□ 2.47
NKX1-2-201ENST00000451024 CCER1Q8TC90 406 aaPredicted RBP30.4■■■□□ 2.46
NKX1-2-201ENST00000451024 NCAPD3P42695 1498 aa30.26■■■□□ 2.43
NKX1-2-201ENST00000451024 TTBK1Q5TCY1 1321 aaPredicted RBP30.23■■■□□ 2.43
NKX1-2-201ENST00000451024 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
NKX1-2-201ENST00000451024 BCL11AQ9H165 835 aa30.14■■■□□ 2.41
NKX1-2-201ENST00000451024 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
NKX1-2-201ENST00000451024 CC2D2AQ9P2K1 1620 aa30.05■■■□□ 2.4
NKX1-2-201ENST00000451024 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
NKX1-2-201ENST00000451024 SOGA1O94964 1423 aa29.72■■■□□ 2.35
NKX1-2-201ENST00000451024 CFTRP13569 1480 aa29.7■■■□□ 2.34
NKX1-2-201ENST00000451024 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
NKX1-2-201ENST00000451024 MIER1Q8N108 512 aa29.65■■■□□ 2.34
NKX1-2-201ENST00000451024 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.34
NKX1-2-201ENST00000451024 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.33
NKX1-2-201ENST00000451024 ANP32EQ9BTT0 268 aa29.61■■■□□ 2.33
NKX1-2-201ENST00000451024 RUSC2Q8N2Y8 1516 aa29.6■■■□□ 2.33
NKX1-2-201ENST00000451024 CSRNP3Q8WYN3 585 aa29.56■■■□□ 2.32
NKX1-2-201ENST00000451024 ZNF316A6NFI3 1004 aaPredicted RBP29.52■■■□□ 2.32
NKX1-2-201ENST00000451024 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
NKX1-2-201ENST00000451024 EEA1Q15075 1411 aa29.42■■■□□ 2.3
NKX1-2-201ENST00000451024 NESP48681 1621 aa29.41■■■□□ 2.3
NKX1-2-201ENST00000451024 CUX1P39880 1505 aa29.4■■■□□ 2.3
NKX1-2-201ENST00000451024 UBTFP17480 764 aaKnown RBP29.38■■■□□ 2.29
NKX1-2-201ENST00000451024 BCANQ96GW7 911 aa29.36■■■□□ 2.29
NKX1-2-201ENST00000451024 FANCD2Q9BXW9 1451 aa29.31■■■□□ 2.28
NKX1-2-201ENST00000451024 BIVM-ERCC5R4GMW8 1640 aa29.3■■■□□ 2.28
NKX1-2-201ENST00000451024 TSHZ2Q9NRE2 1034 aa29.29■■■□□ 2.28
NKX1-2-201ENST00000451024 SUPT16HQ9Y5B9 1047 aaKnown RBP29.28■■■□□ 2.28
NKX1-2-201ENST00000451024 PRDM2Q13029 1718 aa29.25■■■□□ 2.27
NKX1-2-201ENST00000451024 PRKCSHP14314 528 aaPredicted RBP29.23■■■□□ 2.27
NKX1-2-201ENST00000451024 GOLGA3Q08378 1498 aa29.15■■■□□ 2.26
NKX1-2-201ENST00000451024 TNIKQ9UKE5 1360 aa29.13■■■□□ 2.25
NKX1-2-201ENST00000451024 LAMC3Q9Y6N6 1575 aa29.11■■■□□ 2.25
NKX1-2-201ENST00000451024 CEP164Q9UPV0 1460 aa29.11■■■□□ 2.25
NKX1-2-201ENST00000451024 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
NKX1-2-201ENST00000451024 FGD5Q6ZNL6 1462 aa29.08■■■□□ 2.25
NKX1-2-201ENST00000451024 RANGAP1P46060 587 aaPredicted RBP29.08■■■□□ 2.25
NKX1-2-201ENST00000451024 CEP162Q5TB80 1403 aa29.07■■■□□ 2.24
NKX1-2-201ENST00000451024 PDS5BQ9NTI5 1447 aa29.05■■■□□ 2.24
NKX1-2-201ENST00000451024 RAPGEF2Q9Y4G8 1499 aa29.04■■■□□ 2.24
NKX1-2-201ENST00000451024 CUX2O14529 1486 aa29.02■■■□□ 2.24
NKX1-2-201ENST00000451024 HNRNPUL2Q1KMD3 747 aaKnown RBP29.01■■■□□ 2.23
NKX1-2-201ENST00000451024 TOPBP1Q92547 1522 aa28.98■■■□□ 2.23
NKX1-2-201ENST00000451024 KIF21BO75037 1637 aa28.97■■■□□ 2.23
NKX1-2-201ENST00000451024 DNMBPQ6XZF7 1577 aa28.94■■■□□ 2.22
NKX1-2-201ENST00000451024 RAD54L2Q9Y4B4 1467 aa28.94■■■□□ 2.22
NKX1-2-201ENST00000451024 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
NKX1-2-201ENST00000451024 POLA1P09884 1462 aaPredicted RBP28.89■■■□□ 2.22
NKX1-2-201ENST00000451024 PRXQ9BXM0 1461 aa28.88■■■□□ 2.21
NKX1-2-201ENST00000451024 IGF1RP08069 1367 aa28.86■■■□□ 2.21
NKX1-2-201ENST00000451024 KIF21AQ7Z4S6 1674 aa28.82■■■□□ 2.2
NKX1-2-201ENST00000451024 CLIP1P30622 1438 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms