RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
PUF60-201ENST00000313352 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
PUF60-201ENST00000313352 ABCC9O60706 1549 aa36.22■■■■□ 3.39
PUF60-201ENST00000313352 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
PUF60-201ENST00000313352 RB1CC1Q8TDY2 1594 aa34.69■■■■□ 3.14
PUF60-201ENST00000313352 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
PUF60-201ENST00000313352 NACADO15069 1562 aa34.65■■■■□ 3.14
PUF60-201ENST00000313352 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
PUF60-201ENST00000313352 DCAF1Q9Y4B6 1507 aa34.31■■■■□ 3.08
PUF60-201ENST00000313352 UNC13AQ9UPW8 1703 aa34.03■■■■□ 3.04
PUF60-201ENST00000313352 PABPN1Q86U42 306 aaKnown RBP eCLIP33.91■■■■□ 3.023e-7■■■□□ 16.4
PUF60-201ENST00000313352 SCRIBQ14160 1630 aa33.81■■■■□ 3
PUF60-201ENST00000313352 BICRAQ9NZM4 1560 aa33.78■■■■□ 3
PUF60-201ENST00000313352 DNAJC5BQ9UF47 199 aa33.31■■■□□ 2.92
PUF60-201ENST00000313352 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
PUF60-201ENST00000313352 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
PUF60-201ENST00000313352 CC2D2AQ9P2K1 1620 aa32.71■■■□□ 2.83
PUF60-201ENST00000313352 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
PUF60-201ENST00000313352 SMARCA4P51532 1647 aa32.28■■■□□ 2.76
PUF60-201ENST00000313352 BAZ1AQ9NRL2 1556 aaPredicted RBP32.19■■■□□ 2.74
PUF60-201ENST00000313352 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
PUF60-201ENST00000313352 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
PUF60-201ENST00000313352 NCAPD3P42695 1498 aa32.02■■■□□ 2.72
PUF60-201ENST00000313352 SMARCA2P51531 1590 aa31.97■■■□□ 2.71
PUF60-201ENST00000313352 PEG3Q9GZU2 1588 aa31.9■■■□□ 2.7
PUF60-201ENST00000313352 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
PUF60-201ENST00000313352 WIZO95785 1651 aa31.82■■■□□ 2.68
PUF60-201ENST00000313352 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
PUF60-201ENST00000313352 RSF1Q96T23 1441 aaPredicted RBP31.77■■■□□ 2.68
PUF60-201ENST00000313352 NESP48681 1621 aa31.4■■■□□ 2.62
PUF60-201ENST00000313352 TOP2AP11388 1531 aaKnown RBP31.37■■■□□ 2.61
PUF60-201ENST00000313352 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
PUF60-201ENST00000313352 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
PUF60-201ENST00000313352 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
PUF60-201ENST00000313352 SUPT5HO00267 1087 aaKnown RBP31.1■■■□□ 2.57
PUF60-201ENST00000313352 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
PUF60-201ENST00000313352 KIF21AQ7Z4S6 1674 aa30.96■■■□□ 2.55
PUF60-201ENST00000313352 CFTRP13569 1480 aa30.94■■■□□ 2.54
PUF60-201ENST00000313352 PDS5BQ9NTI5 1447 aa30.92■■■□□ 2.54
PUF60-201ENST00000313352 THOC2Q8NI27 1593 aaKnown RBP30.81■■■□□ 2.52
PUF60-201ENST00000313352 FANCD2Q9BXW9 1451 aa30.78■■■□□ 2.52
PUF60-201ENST00000313352 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.5
PUF60-201ENST00000313352 CUX2O14529 1486 aa30.69■■■□□ 2.5
PUF60-201ENST00000313352 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
PUF60-201ENST00000313352 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
PUF60-201ENST00000313352 WDR62O43379 1518 aa30.54■■■□□ 2.48
PUF60-201ENST00000313352 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
PUF60-201ENST00000313352 TOPBP1Q92547 1522 aa30.3■■■□□ 2.44
PUF60-201ENST00000313352 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
PUF60-201ENST00000313352 ABCC8Q09428 1581 aa30.15■■■□□ 2.42
PUF60-201ENST00000313352 CUX1P39880 1505 aa30.13■■■□□ 2.41
PUF60-201ENST00000313352 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
PUF60-201ENST00000313352 ZNF608Q9ULD9 1512 aaPredicted RBP30.04■■■□□ 2.4
PUF60-201ENST00000313352 IFT140Q96RY7 1462 aa30.03■■■□□ 2.4
PUF60-201ENST00000313352 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
PUF60-201ENST00000313352 RAD54L2Q9Y4B4 1467 aa30■■■□□ 2.39
PUF60-201ENST00000313352 TARBP1Q13395 1621 aaKnown RBP29.97■■■□□ 2.39
PUF60-201ENST00000313352 SOGA1O94964 1423 aa29.92■■■□□ 2.38
PUF60-201ENST00000313352 WRNQ14191 1432 aaPredicted RBP eCLIP29.91■■■□□ 2.38
PUF60-201ENST00000313352 SYNJ1O43426 1573 aa29.9■■■□□ 2.38
PUF60-201ENST00000313352 AQRO60306 1485 aaKnown RBP eCLIP29.86■■■□□ 2.378e-7■■■■■ 58
PUF60-201ENST00000313352 EIF4G3O43432 1585 aaKnown RBP29.84■■■□□ 2.37
PUF60-201ENST00000313352 TDRD9Q8NDG6 1382 aaKnown RBP29.82■■■□□ 2.36
PUF60-201ENST00000313352 TOP2BQ02880 1626 aa29.81■■■□□ 2.36
PUF60-201ENST00000313352 BIVM-ERCC5R4GMW8 1640 aa29.81■■■□□ 2.36
PUF60-201ENST00000313352 DNAJC5Q9H3Z4 198 aa29.8■■■□□ 2.36
PUF60-201ENST00000313352 WDR97A6NE52 1622 aa29.72■■■□□ 2.35
PUF60-201ENST00000313352 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
PUF60-201ENST00000313352 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
PUF60-201ENST00000313352 ABCA5Q8WWZ7 1642 aa29.56■■■□□ 2.32
PUF60-201ENST00000313352 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
PUF60-201ENST00000313352 GRIN2BQ13224 1484 aa29.52■■■□□ 2.32
PUF60-201ENST00000313352 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
PUF60-201ENST00000313352 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
PUF60-201ENST00000313352 FBLN2P98095 1184 aa29.49■■■□□ 2.31
PUF60-201ENST00000313352 CHD1O14646 1710 aa29.47■■■□□ 2.31
PUF60-201ENST00000313352 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
PUF60-201ENST00000313352 CHMP7Q8WUX9 453 aaPredicted RBP29.35■■■□□ 2.29
PUF60-201ENST00000313352 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
PUF60-201ENST00000313352 ERICH3Q5RHP9 1530 aa29.27■■■□□ 2.28
PUF60-201ENST00000313352 ADAMTS12P58397 1594 aa29.27■■■□□ 2.28
PUF60-201ENST00000313352 TRIM41Q8WV44 630 aa29.27■■■□□ 2.28
PUF60-201ENST00000313352 KIF27Q86VH2 1401 aa29.24■■■□□ 2.27
PUF60-201ENST00000313352 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.26
PUF60-201ENST00000313352 FHAD1B1AJZ9 1412 aa29.19■■■□□ 2.26
PUF60-201ENST00000313352 IGF1RP08069 1367 aa29.19■■■□□ 2.26
PUF60-201ENST00000313352 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
PUF60-201ENST00000313352 CLASP1Q7Z460 1538 aa29.12■■■□□ 2.25
PUF60-201ENST00000313352 CEP170Q5SW79 1584 aa29.08■■■□□ 2.25
PUF60-201ENST00000313352 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
PUF60-201ENST00000313352 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
PUF60-201ENST00000313352 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
PUF60-201ENST00000313352 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
PUF60-201ENST00000313352 NUP160Q12769 1436 aa29.03■■■□□ 2.24
PUF60-201ENST00000313352 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
PUF60-201ENST00000313352 CUL7Q14999 1698 aa29■■■□□ 2.23
PUF60-201ENST00000313352 CARMIL1Q5VZK9 1371 aa28.99■■■□□ 2.23
PUF60-201ENST00000313352 ERCC6L2Q5T890 1561 aa28.87■■■□□ 2.21
PUF60-201ENST00000313352 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
PUF60-201ENST00000313352 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms