RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
TNFSF11-203ENST00000398795 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
TNFSF11-203ENST00000398795 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
TNFSF11-203ENST00000398795 SHROOM4Q9ULL8 1493 aa34.34■■■■□ 3.09
TNFSF11-203ENST00000398795 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
TNFSF11-203ENST00000398795 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
TNFSF11-203ENST00000398795 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
TNFSF11-203ENST00000398795 CHIC1Q5VXU3 224 aa33.09■■■□□ 2.89
TNFSF11-203ENST00000398795 MYO15BQ96JP2 1530 aa32.94■■■□□ 2.86
TNFSF11-203ENST00000398795 ABCC9O60706 1549 aa32.43■■■□□ 2.78
TNFSF11-203ENST00000398795 HRCP23327 699 aa32.39■■■□□ 2.78
TNFSF11-203ENST00000398795 PCGF6Q9BYE7 350 aa32.1■■■□□ 2.73
TNFSF11-203ENST00000398795 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
TNFSF11-203ENST00000398795 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
TNFSF11-203ENST00000398795 LOC105371045A0A1W2PR82 267 aa31.95■■■□□ 2.7
TNFSF11-203ENST00000398795 RB1CC1Q8TDY2 1594 aa31.82■■■□□ 2.68
TNFSF11-203ENST00000398795 NACADO15069 1562 aa31.81■■■□□ 2.68
TNFSF11-203ENST00000398795 TRIM26Q12899 539 aaPredicted RBP31.64■■■□□ 2.66
TNFSF11-203ENST00000398795 TRIM41Q8WV44 630 aa31.58■■■□□ 2.65
TNFSF11-203ENST00000398795 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
TNFSF11-203ENST00000398795 PPARGC1BQ86YN6 1023 aaKnown RBP31.44■■■□□ 2.62
TNFSF11-203ENST00000398795 MROH2BQ7Z745 1585 aa31.42■■■□□ 2.62
TNFSF11-203ENST00000398795 WIZO95785 1651 aa31.21■■■□□ 2.59
TNFSF11-203ENST00000398795 BAZ1AQ9NRL2 1556 aaPredicted RBP31.19■■■□□ 2.58
TNFSF11-203ENST00000398795 FAM9AQ8IZU1 332 aaPredicted RBP31.14■■■□□ 2.58
TNFSF11-203ENST00000398795 ZEB1P37275 1124 aaPredicted RBP31.13■■■□□ 2.57
TNFSF11-203ENST00000398795 EIF4G1Q04637 1599 aaKnown RBP31.03■■■□□ 2.56
TNFSF11-203ENST00000398795 TOP2AP11388 1531 aaKnown RBP30.89■■■□□ 2.53
TNFSF11-203ENST00000398795 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
TNFSF11-203ENST00000398795 EHMT2Q96KQ7 1210 aa30.71■■■□□ 2.51
TNFSF11-203ENST00000398795 CCDC88BA6NC98 1476 aa30.68■■■□□ 2.5
TNFSF11-203ENST00000398795 SMARCA2P51531 1590 aa30.67■■■□□ 2.5
TNFSF11-203ENST00000398795 UNC13AQ9UPW8 1703 aa30.56■■■□□ 2.48
TNFSF11-203ENST00000398795 ABCC8Q09428 1581 aa30.54■■■□□ 2.48
TNFSF11-203ENST00000398795 WRNQ14191 1432 aaPredicted RBP eCLIP30.49■■■□□ 2.47
TNFSF11-203ENST00000398795 EEA1Q15075 1411 aa30.45■■■□□ 2.47
TNFSF11-203ENST00000398795 TNIKQ9UKE5 1360 aa30.36■■■□□ 2.45
TNFSF11-203ENST00000398795 CEP162Q5TB80 1403 aa30.34■■■□□ 2.45
TNFSF11-203ENST00000398795 PEG3Q9GZU2 1588 aa30.33■■■□□ 2.45
TNFSF11-203ENST00000398795 SOGA1O94964 1423 aa30.33■■■□□ 2.45
TNFSF11-203ENST00000398795 BICRAQ9NZM4 1560 aa30.29■■■□□ 2.44
TNFSF11-203ENST00000398795 CSRNP3Q8WYN3 585 aa30.24■■■□□ 2.43
TNFSF11-203ENST00000398795 CCER1Q8TC90 406 aaPredicted RBP30.17■■■□□ 2.42
TNFSF11-203ENST00000398795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.16■■■□□ 2.42
TNFSF11-203ENST00000398795 GOLGA3Q08378 1498 aa30.14■■■□□ 2.42
TNFSF11-203ENST00000398795 RUSC2Q8N2Y8 1516 aa30.12■■■□□ 2.41
TNFSF11-203ENST00000398795 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.41
TNFSF11-203ENST00000398795 UBTFP17480 764 aaKnown RBP30.02■■■□□ 2.4
TNFSF11-203ENST00000398795 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
TNFSF11-203ENST00000398795 CEP164Q9UPV0 1460 aa29.97■■■□□ 2.39
TNFSF11-203ENST00000398795 KIF21BO75037 1637 aa29.95■■■□□ 2.39
TNFSF11-203ENST00000398795 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
TNFSF11-203ENST00000398795 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.37
TNFSF11-203ENST00000398795 SCAF1Q9H7N4 1312 aaKnown RBP29.83■■■□□ 2.37
TNFSF11-203ENST00000398795 TTBK1Q5TCY1 1321 aaPredicted RBP29.82■■■□□ 2.36
TNFSF11-203ENST00000398795 CLIP1P30622 1438 aa29.75■■■□□ 2.35
TNFSF11-203ENST00000398795 VPS8Q8N3P4 1428 aa29.7■■■□□ 2.34
TNFSF11-203ENST00000398795 DIEXFQ68CQ4 756 aaKnown RBP29.69■■■□□ 2.34
TNFSF11-203ENST00000398795 PELP1Q8IZL8 1130 aaKnown RBP29.66■■■□□ 2.34
TNFSF11-203ENST00000398795 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
TNFSF11-203ENST00000398795 RAPGEF2Q9Y4G8 1499 aa29.62■■■□□ 2.33
TNFSF11-203ENST00000398795 ACIN1Q9UKV3 1341 aaKnown RBP29.6■■■□□ 2.33
TNFSF11-203ENST00000398795 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
TNFSF11-203ENST00000398795 ZNF316A6NFI3 1004 aaPredicted RBP29.49■■■□□ 2.31
TNFSF11-203ENST00000398795 ERICH3Q5RHP9 1530 aa29.48■■■□□ 2.31
TNFSF11-203ENST00000398795 APLP2Q06481 763 aa29.46■■■□□ 2.31
TNFSF11-203ENST00000398795 HMGXB3Q12766 1538 aa29.46■■■□□ 2.31
TNFSF11-203ENST00000398795 CENPBP07199 599 aaPredicted RBP29.46■■■□□ 2.31
TNFSF11-203ENST00000398795 NEUROD1Q13562 356 aa29.45■■■□□ 2.3
TNFSF11-203ENST00000398795 NCAPD3P42695 1498 aa29.44■■■□□ 2.3
TNFSF11-203ENST00000398795 PRXQ9BXM0 1461 aa29.43■■■□□ 2.3
TNFSF11-203ENST00000398795 HNRNPUL2Q1KMD3 747 aaKnown RBP29.39■■■□□ 2.29
TNFSF11-203ENST00000398795 CUX1P39880 1505 aa29.26■■■□□ 2.28
TNFSF11-203ENST00000398795 ARAP1Q96P48 1450 aa29.26■■■□□ 2.27
TNFSF11-203ENST00000398795 KIF27Q86VH2 1401 aa29.23■■■□□ 2.27
TNFSF11-203ENST00000398795 CFTRP13569 1480 aa29.22■■■□□ 2.27
TNFSF11-203ENST00000398795 CLSPNQ9HAW4 1339 aa29.2■■■□□ 2.26
TNFSF11-203ENST00000398795 RANGAP1P46060 587 aaPredicted RBP29.16■■■□□ 2.26
TNFSF11-203ENST00000398795 GTF3C3Q9Y5Q9 886 aa29.16■■■□□ 2.26
TNFSF11-203ENST00000398795 RRBP1Q9P2E9 1410 aaKnown RBP29.06■■■□□ 2.24
TNFSF11-203ENST00000398795 DHX57Q6P158 1386 aaKnown RBP29.03■■■□□ 2.24
TNFSF11-203ENST00000398795 KANK4Q5T7N3 995 aaPredicted RBP29.01■■■□□ 2.23
TNFSF11-203ENST00000398795 MIER1Q8N108 512 aa28.98■■■□□ 2.23
TNFSF11-203ENST00000398795 ARHGAP35Q9NRY4 1499 aa28.98■■■□□ 2.23
TNFSF11-203ENST00000398795 CUX2O14529 1486 aa28.97■■■□□ 2.23
TNFSF11-203ENST00000398795 PRDM2Q13029 1718 aa28.93■■■□□ 2.22
TNFSF11-203ENST00000398795 CCNB3Q8WWL7 1395 aa28.87■■■□□ 2.21
TNFSF11-203ENST00000398795 IGF1RP08069 1367 aa28.86■■■□□ 2.21
TNFSF11-203ENST00000398795 MAP3K1Q13233 1512 aa28.85■■■□□ 2.21
TNFSF11-203ENST00000398795 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
TNFSF11-203ENST00000398795 YTHDC1Q96MU7 727 aaKnown RBP28.82■■■□□ 2.2
TNFSF11-203ENST00000398795 CARMIL1Q5VZK9 1371 aa28.73■■■□□ 2.19
TNFSF11-203ENST00000398795 TIAM1Q13009 1591 aa28.72■■■□□ 2.19
TNFSF11-203ENST00000398795 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
TNFSF11-203ENST00000398795 FHAD1B1AJZ9 1412 aa28.62■■■□□ 2.17
TNFSF11-203ENST00000398795 LRRC9Q6ZRR7 1453 aa28.61■■■□□ 2.17
TNFSF11-203ENST00000398795 RAB3GAP2Q9H2M9 1393 aa28.58■■■□□ 2.17
TNFSF11-203ENST00000398795 MAPKBP1O60336 1514 aa28.51■■■□□ 2.16
TNFSF11-203ENST00000398795 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.16
TNFSF11-203ENST00000398795 SETD5Q9C0A6 1442 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms