RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 NISCHQ9Y2I1 1504 aa40.92■■■■■ 4.14
VMAC-201ENST00000339485 CCDC180Q9P1Z9 1646 aa35.71■■■■□ 3.31
VMAC-201ENST00000339485 ZCCHC6Q5VYS8 1495 aaKnown RBP34.38■■■■□ 3.09
VMAC-201ENST00000339485 ABCC9O60706 1549 aa33.9■■■■□ 3.02
VMAC-201ENST00000339485 DCAF8L2P0C7V8 631 aa33.88■■■■□ 3.01
VMAC-201ENST00000339485 DCAF1Q9Y4B6 1507 aa33.78■■■■□ 3
VMAC-201ENST00000339485 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
VMAC-201ENST00000339485 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
VMAC-201ENST00000339485 NACADO15069 1562 aa33.25■■■□□ 2.91
VMAC-201ENST00000339485 RB1CC1Q8TDY2 1594 aa33.01■■■□□ 2.87
VMAC-201ENST00000339485 SCRIBQ14160 1630 aa32.92■■■□□ 2.86
VMAC-201ENST00000339485 UNC13AQ9UPW8 1703 aa32.45■■■□□ 2.78
VMAC-201ENST00000339485 SUPT5HO00267 1087 aaKnown RBP32.11■■■□□ 2.73
VMAC-201ENST00000339485 BICRAQ9NZM4 1560 aa32.05■■■□□ 2.72
VMAC-201ENST00000339485 PABPN1Q86U42 306 aaKnown RBP eCLIP31.94■■■□□ 2.7
VMAC-201ENST00000339485 CECR2Q9BXF3 1484 aa31.85■■■□□ 2.69
VMAC-201ENST00000339485 RSF1Q96T23 1441 aaPredicted RBP31.72■■■□□ 2.67
VMAC-201ENST00000339485 MROH2BQ7Z745 1585 aa31.65■■■□□ 2.66
VMAC-201ENST00000339485 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
VMAC-201ENST00000339485 SMARCA4P51532 1647 aa31.5■■■□□ 2.63
VMAC-201ENST00000339485 WIZO95785 1651 aa31.42■■■□□ 2.62
VMAC-201ENST00000339485 EIF4G1Q04637 1599 aaKnown RBP31.09■■■□□ 2.57
VMAC-201ENST00000339485 PEG3Q9GZU2 1588 aa31.07■■■□□ 2.56
VMAC-201ENST00000339485 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
VMAC-201ENST00000339485 ATAD2BQ9ULI0 1458 aa30.97■■■□□ 2.55
VMAC-201ENST00000339485 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
VMAC-201ENST00000339485 BAZ1BQ9UIG0 1483 aaKnown RBP30.81■■■□□ 2.52
VMAC-201ENST00000339485 HRCP23327 699 aa30.8■■■□□ 2.52
VMAC-201ENST00000339485 CHIC1Q5VXU3 224 aa30.78■■■□□ 2.52
VMAC-201ENST00000339485 CCDC88BA6NC98 1476 aa30.72■■■□□ 2.51
VMAC-201ENST00000339485 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
VMAC-201ENST00000339485 CC2D2AQ9P2K1 1620 aa30.66■■■□□ 2.5
VMAC-201ENST00000339485 HMGXB3Q12766 1538 aa30.66■■■□□ 2.5
VMAC-201ENST00000339485 PCGF6Q9BYE7 350 aa30.37■■■□□ 2.45
VMAC-201ENST00000339485 TRIM41Q8WV44 630 aa30.14■■■□□ 2.42
VMAC-201ENST00000339485 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
VMAC-201ENST00000339485 DNAJC5BQ9UF47 199 aa30.06■■■□□ 2.4
VMAC-201ENST00000339485 PPARGC1BQ86YN6 1023 aaKnown RBP30.05■■■□□ 2.4
VMAC-201ENST00000339485 CFTRP13569 1480 aa30■■■□□ 2.39
VMAC-201ENST00000339485 PRDM2Q13029 1718 aa29.92■■■□□ 2.38
VMAC-201ENST00000339485 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
VMAC-201ENST00000339485 LOC105371045A0A1W2PR82 267 aa29.88■■■□□ 2.37
VMAC-201ENST00000339485 WRNQ14191 1432 aaPredicted RBP eCLIP29.87■■■□□ 2.37
VMAC-201ENST00000339485 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
VMAC-201ENST00000339485 NESP48681 1621 aa29.75■■■□□ 2.35
VMAC-201ENST00000339485 TRIM26Q12899 539 aaPredicted RBP29.68■■■□□ 2.34
VMAC-201ENST00000339485 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
VMAC-201ENST00000339485 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
VMAC-201ENST00000339485 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
VMAC-201ENST00000339485 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
VMAC-201ENST00000339485 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
VMAC-201ENST00000339485 CUX1P39880 1505 aa29.59■■■□□ 2.33
VMAC-201ENST00000339485 SOGA1O94964 1423 aa29.51■■■□□ 2.31
VMAC-201ENST00000339485 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
VMAC-201ENST00000339485 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
VMAC-201ENST00000339485 RUSC2Q8N2Y8 1516 aa29.42■■■□□ 2.3
VMAC-201ENST00000339485 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
VMAC-201ENST00000339485 EEA1Q15075 1411 aa29.34■■■□□ 2.29
VMAC-201ENST00000339485 DNMBPQ6XZF7 1577 aa29.33■■■□□ 2.29
VMAC-201ENST00000339485 EHMT2Q96KQ7 1210 aa29.31■■■□□ 2.28
VMAC-201ENST00000339485 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
VMAC-201ENST00000339485 FGD5Q6ZNL6 1462 aa29.28■■■□□ 2.28
VMAC-201ENST00000339485 ZEB1P37275 1124 aaPredicted RBP29.27■■■□□ 2.28
VMAC-201ENST00000339485 URB2Q14146 1524 aaKnown RBP29.26■■■□□ 2.27
VMAC-201ENST00000339485 CSRNP3Q8WYN3 585 aa29.22■■■□□ 2.27
VMAC-201ENST00000339485 POLA1P09884 1462 aaPredicted RBP29.15■■■□□ 2.26
VMAC-201ENST00000339485 KIF27Q86VH2 1401 aa29.1■■■□□ 2.25
VMAC-201ENST00000339485 CUX2O14529 1486 aa29.08■■■□□ 2.25
VMAC-201ENST00000339485 MRC2Q9UBG0 1479 aa29.08■■■□□ 2.25
VMAC-201ENST00000339485 RAD54L2Q9Y4B4 1467 aa29.07■■■□□ 2.24
VMAC-201ENST00000339485 ERCC6Q03468 1493 aa29.05■■■□□ 2.24
VMAC-201ENST00000339485 KIF21BO75037 1637 aa29.04■■■□□ 2.24
VMAC-201ENST00000339485 GOLGA3Q08378 1498 aa29■■■□□ 2.23
VMAC-201ENST00000339485 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
VMAC-201ENST00000339485 WDR97A6NE52 1622 aa28.96■■■□□ 2.23
VMAC-201ENST00000339485 WDR62O43379 1518 aa28.94■■■□□ 2.22
VMAC-201ENST00000339485 RAPGEF2Q9Y4G8 1499 aa28.91■■■□□ 2.22
VMAC-201ENST00000339485 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
VMAC-201ENST00000339485 PRXQ9BXM0 1461 aa28.89■■■□□ 2.21
VMAC-201ENST00000339485 UBTFP17480 764 aaKnown RBP28.89■■■□□ 2.21
VMAC-201ENST00000339485 TARBP1Q13395 1621 aaKnown RBP28.86■■■□□ 2.21
VMAC-201ENST00000339485 TNIKQ9UKE5 1360 aa28.86■■■□□ 2.21
VMAC-201ENST00000339485 IGF1RP08069 1367 aa28.84■■■□□ 2.21
VMAC-201ENST00000339485 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
VMAC-201ENST00000339485 ABCA5Q8WWZ7 1642 aa28.79■■■□□ 2.2
VMAC-201ENST00000339485 PELP1Q8IZL8 1130 aaKnown RBP28.79■■■□□ 2.2
VMAC-201ENST00000339485 TDRD9Q8NDG6 1382 aaKnown RBP28.78■■■□□ 2.2
VMAC-201ENST00000339485 CEP162Q5TB80 1403 aa28.76■■■□□ 2.19
VMAC-201ENST00000339485 SCAF1Q9H7N4 1312 aaKnown RBP28.74■■■□□ 2.19
VMAC-201ENST00000339485 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
VMAC-201ENST00000339485 CARMIL1Q5VZK9 1371 aa28.71■■■□□ 2.19
VMAC-201ENST00000339485 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
VMAC-201ENST00000339485 CUL7Q14999 1698 aa28.66■■■□□ 2.18
VMAC-201ENST00000339485 PBRM1Q86U86 1689 aa28.62■■■□□ 2.17
VMAC-201ENST00000339485 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.17
VMAC-201ENST00000339485 ZNF608Q9ULD9 1512 aaPredicted RBP28.61■■■□□ 2.17
VMAC-201ENST00000339485 CLIP1P30622 1438 aa28.54■■■□□ 2.16
VMAC-201ENST00000339485 EIF4G3O43432 1585 aaKnown RBP28.53■■■□□ 2.16
VMAC-201ENST00000339485 RANGAP1P46060 587 aaPredicted RBP28.52■■■□□ 2.16
VMAC-201ENST00000339485 GRIN2BQ13224 1484 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms