RNA–Protein interactions for RNA: ENST00000330333.10

BACE2-202, Transcript of beta-secretase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BACE2, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE2-202ENST00000330333 NISCHQ9Y2I1 1504 aa39.42■■■■□ 3.9
BACE2-202ENST00000330333 SHROOM4Q9ULL8 1493 aa34.3■■■■□ 3.08
BACE2-202ENST00000330333 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
BACE2-202ENST00000330333 ZCCHC6Q5VYS8 1495 aaKnown RBP33.33■■■□□ 2.93
BACE2-202ENST00000330333 DCAF8L2P0C7V8 631 aa33.32■■■□□ 2.92
BACE2-202ENST00000330333 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
BACE2-202ENST00000330333 CHIC1Q5VXU3 224 aa32.64■■■□□ 2.82
BACE2-202ENST00000330333 MYO15BQ96JP2 1530 aa32.54■■■□□ 2.8
BACE2-202ENST00000330333 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
BACE2-202ENST00000330333 PCGF6Q9BYE7 350 aa32.03■■■□□ 2.72
BACE2-202ENST00000330333 HRCP23327 699 aa31.92■■■□□ 2.7
BACE2-202ENST00000330333 LOC105371045A0A1W2PR82 267 aa31.9■■■□□ 2.7
BACE2-202ENST00000330333 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
BACE2-202ENST00000330333 PPARGC1BQ86YN6 1023 aaKnown RBP31.52■■■□□ 2.64
BACE2-202ENST00000330333 ABCC9O60706 1549 aa31.46■■■□□ 2.63
BACE2-202ENST00000330333 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.61
BACE2-202ENST00000330333 FAM9AQ8IZU1 332 aaPredicted RBP31.25■■■□□ 2.59
BACE2-202ENST00000330333 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
BACE2-202ENST00000330333 EHMT2Q96KQ7 1210 aa31.19■■■□□ 2.58
BACE2-202ENST00000330333 TRIM26Q12899 539 aaPredicted RBP31.13■■■□□ 2.57
BACE2-202ENST00000330333 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
BACE2-202ENST00000330333 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.54
BACE2-202ENST00000330333 MROH2BQ7Z745 1585 aa30.78■■■□□ 2.52
BACE2-202ENST00000330333 NACADO15069 1562 aa30.74■■■□□ 2.51
BACE2-202ENST00000330333 WIZO95785 1651 aa30.61■■■□□ 2.49
BACE2-202ENST00000330333 ZEB1P37275 1124 aaPredicted RBP30.39■■■□□ 2.46
BACE2-202ENST00000330333 BAZ1AQ9NRL2 1556 aaPredicted RBP30.25■■■□□ 2.43
BACE2-202ENST00000330333 TTBK1Q5TCY1 1321 aaPredicted RBP30.18■■■□□ 2.42
BACE2-202ENST00000330333 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
BACE2-202ENST00000330333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.1■■■□□ 2.41
BACE2-202ENST00000330333 EIF4G1Q04637 1599 aaKnown RBP30.04■■■□□ 2.4
BACE2-202ENST00000330333 CCDC88BA6NC98 1476 aa30.03■■■□□ 2.4
BACE2-202ENST00000330333 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
BACE2-202ENST00000330333 TOP2AP11388 1531 aaKnown RBP29.98■■■□□ 2.39
BACE2-202ENST00000330333 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
BACE2-202ENST00000330333 CCER1Q8TC90 406 aaPredicted RBP29.96■■■□□ 2.39
BACE2-202ENST00000330333 SOGA1O94964 1423 aa29.9■■■□□ 2.38
BACE2-202ENST00000330333 SMARCA2P51531 1590 aa29.87■■■□□ 2.37
BACE2-202ENST00000330333 UBTFP17480 764 aaKnown RBP29.82■■■□□ 2.36
BACE2-202ENST00000330333 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
BACE2-202ENST00000330333 CEP162Q5TB80 1403 aa29.77■■■□□ 2.36
BACE2-202ENST00000330333 RUSC2Q8N2Y8 1516 aa29.75■■■□□ 2.35
BACE2-202ENST00000330333 CSRNP3Q8WYN3 585 aa29.73■■■□□ 2.35
BACE2-202ENST00000330333 SCAF1Q9H7N4 1312 aaKnown RBP29.62■■■□□ 2.33
BACE2-202ENST00000330333 TNIKQ9UKE5 1360 aa29.61■■■□□ 2.33
BACE2-202ENST00000330333 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.33
BACE2-202ENST00000330333 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
BACE2-202ENST00000330333 EEA1Q15075 1411 aa29.46■■■□□ 2.31
BACE2-202ENST00000330333 RANGAP1P46060 587 aaPredicted RBP29.46■■■□□ 2.31
BACE2-202ENST00000330333 GOLGA3Q08378 1498 aa29.41■■■□□ 2.3
BACE2-202ENST00000330333 DIEXFQ68CQ4 756 aaKnown RBP29.4■■■□□ 2.3
BACE2-202ENST00000330333 HNRNPUL2Q1KMD3 747 aaKnown RBP29.33■■■□□ 2.29
BACE2-202ENST00000330333 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
BACE2-202ENST00000330333 NEUROD1Q13562 356 aa29.27■■■□□ 2.28
BACE2-202ENST00000330333 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
BACE2-202ENST00000330333 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
BACE2-202ENST00000330333 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.27
BACE2-202ENST00000330333 CEP164Q9UPV0 1460 aa29.2■■■□□ 2.27
BACE2-202ENST00000330333 ACIN1Q9UKV3 1341 aaKnown RBP29.2■■■□□ 2.27
BACE2-202ENST00000330333 CLIP1P30622 1438 aa29.19■■■□□ 2.26
BACE2-202ENST00000330333 APLP2Q06481 763 aa29.13■■■□□ 2.25
BACE2-202ENST00000330333 RAPGEF2Q9Y4G8 1499 aa29.11■■■□□ 2.25
BACE2-202ENST00000330333 ZNF316A6NFI3 1004 aaPredicted RBP29.06■■■□□ 2.24
BACE2-202ENST00000330333 KIF21BO75037 1637 aa29.03■■■□□ 2.24
BACE2-202ENST00000330333 GTF3C3Q9Y5Q9 886 aa29■■■□□ 2.23
BACE2-202ENST00000330333 VPS8Q8N3P4 1428 aa29■■■□□ 2.23
BACE2-202ENST00000330333 CENPBP07199 599 aaPredicted RBP29■■■□□ 2.23
BACE2-202ENST00000330333 YTHDC1Q96MU7 727 aaKnown RBP28.96■■■□□ 2.23
BACE2-202ENST00000330333 PELP1Q8IZL8 1130 aaKnown RBP28.94■■■□□ 2.22
BACE2-202ENST00000330333 TOP2BQ02880 1626 aa28.8■■■□□ 2.2
BACE2-202ENST00000330333 MIER1Q8N108 512 aa28.79■■■□□ 2.2
BACE2-202ENST00000330333 KANK4Q5T7N3 995 aaPredicted RBP28.74■■■□□ 2.19
BACE2-202ENST00000330333 PRXQ9BXM0 1461 aa28.64■■■□□ 2.18
BACE2-202ENST00000330333 ARAP1Q96P48 1450 aa28.61■■■□□ 2.17
BACE2-202ENST00000330333 BIVM-ERCC5R4GMW8 1640 aa28.6■■■□□ 2.17
BACE2-202ENST00000330333 CUX1P39880 1505 aa28.6■■■□□ 2.17
BACE2-202ENST00000330333 ITGAEP38570 1179 aa28.58■■■□□ 2.17
BACE2-202ENST00000330333 KIF27Q86VH2 1401 aa28.55■■■□□ 2.16
BACE2-202ENST00000330333 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
BACE2-202ENST00000330333 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
BACE2-202ENST00000330333 DHX57Q6P158 1386 aaKnown RBP28.49■■■□□ 2.15
BACE2-202ENST00000330333 HMGXB3Q12766 1538 aa28.45■■■□□ 2.14
BACE2-202ENST00000330333 CFTRP13569 1480 aa28.41■■■□□ 2.14
BACE2-202ENST00000330333 ARHGAP35Q9NRY4 1499 aa28.36■■■□□ 2.13
BACE2-202ENST00000330333 CUX2O14529 1486 aa28.32■■■□□ 2.12
BACE2-202ENST00000330333 CLSPNQ9HAW4 1339 aa28.31■■■□□ 2.12
BACE2-202ENST00000330333 CCNB3Q8WWL7 1395 aa28.31■■■□□ 2.12
BACE2-202ENST00000330333 RRBP1Q9P2E9 1410 aaKnown RBP28.29■■■□□ 2.12
BACE2-202ENST00000330333 P3H3Q8IVL6 736 aa28.27■■■□□ 2.12
BACE2-202ENST00000330333 IGF1RP08069 1367 aa28.27■■■□□ 2.12
BACE2-202ENST00000330333 ATP1B4Q9UN42 357 aaPredicted RBP28.26■■■□□ 2.11
BACE2-202ENST00000330333 CARMIL1Q5VZK9 1371 aa28.18■■■□□ 2.1
BACE2-202ENST00000330333 CADPSQ9ULU8 1353 aa28.14■■■□□ 2.1
BACE2-202ENST00000330333 FAM50AQ14320 339 aaKnown RBP28.14■■■□□ 2.09
BACE2-202ENST00000330333 RAB3GAP2Q9H2M9 1393 aa28.12■■■□□ 2.09
BACE2-202ENST00000330333 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
BACE2-202ENST00000330333 PHLDB1Q86UU1 1377 aa28.02■■■□□ 2.08
BACE2-202ENST00000330333 SIN3AQ96ST3 1273 aa28■■■□□ 2.07
BACE2-202ENST00000330333 TIAM1Q13009 1591 aa27.99■■■□□ 2.07
BACE2-202ENST00000330333 KCNH8Q96L42 1107 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms