RNA–Protein interactions for RNA: ENST00000599470.5

PAK4-209, Transcript of p21 (RAC1) activated kinase 4, humanhuman

TSL 1 (best) BASIC

Gene PAK4, Length 1,715 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK4-209ENST00000599470 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
PAK4-209ENST00000599470 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.31
PAK4-209ENST00000599470 ZCCHC6Q5VYS8 1495 aaKnown RBP34.46■■■■□ 3.11
PAK4-209ENST00000599470 DCAF1Q9Y4B6 1507 aa33.91■■■■□ 3.02
PAK4-209ENST00000599470 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.98
PAK4-209ENST00000599470 ABCC9O60706 1549 aa33.67■■■□□ 2.98
PAK4-209ENST00000599470 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
PAK4-209ENST00000599470 SHROOM4Q9ULL8 1493 aa33.42■■■□□ 2.94
PAK4-209ENST00000599470 NACADO15069 1562 aa33.24■■■□□ 2.91
PAK4-209ENST00000599470 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
PAK4-209ENST00000599470 SCRIBQ14160 1630 aa32.85■■■□□ 2.85
PAK4-209ENST00000599470 UNC13AQ9UPW8 1703 aa32.36■■■□□ 2.77
PAK4-209ENST00000599470 SUPT5HO00267 1087 aaKnown RBP32.16■■■□□ 2.74
PAK4-209ENST00000599470 BICRAQ9NZM4 1560 aa31.98■■■□□ 2.71
PAK4-209ENST00000599470 CECR2Q9BXF3 1484 aa31.83■■■□□ 2.69
PAK4-209ENST00000599470 RSF1Q96T23 1441 aaPredicted RBP31.8■■■□□ 2.68
PAK4-209ENST00000599470 PABPN1Q86U42 306 aaKnown RBP eCLIP31.72■■■□□ 2.67
PAK4-209ENST00000599470 MROH2BQ7Z745 1585 aa31.66■■■□□ 2.66
PAK4-209ENST00000599470 BAZ1AQ9NRL2 1556 aaPredicted RBP31.64■■■□□ 2.66
PAK4-209ENST00000599470 SMARCA4P51532 1647 aa31.51■■■□□ 2.64
PAK4-209ENST00000599470 WIZO95785 1651 aa31.43■■■□□ 2.62
PAK4-209ENST00000599470 PEG3Q9GZU2 1588 aa31.14■■■□□ 2.58
PAK4-209ENST00000599470 TOP2AP11388 1531 aaKnown RBP31.1■■■□□ 2.57
PAK4-209ENST00000599470 EIF4G1Q04637 1599 aaKnown RBP30.99■■■□□ 2.55
PAK4-209ENST00000599470 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.54
PAK4-209ENST00000599470 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
PAK4-209ENST00000599470 CHIC1Q5VXU3 224 aa30.86■■■□□ 2.53
PAK4-209ENST00000599470 BAZ1BQ9UIG0 1483 aaKnown RBP30.77■■■□□ 2.52
PAK4-209ENST00000599470 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.51
PAK4-209ENST00000599470 HMGXB3Q12766 1538 aa30.66■■■□□ 2.5
PAK4-209ENST00000599470 NCAPD3P42695 1498 aa30.66■■■□□ 2.5
PAK4-209ENST00000599470 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.47
PAK4-209ENST00000599470 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
PAK4-209ENST00000599470 ABCC8Q09428 1581 aa30.15■■■□□ 2.42
PAK4-209ENST00000599470 CFTRP13569 1480 aa30.01■■■□□ 2.39
PAK4-209ENST00000599470 PRDM2Q13029 1718 aa29.96■■■□□ 2.39
PAK4-209ENST00000599470 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
PAK4-209ENST00000599470 CADPSQ9ULU8 1353 aa29.86■■■□□ 2.37
PAK4-209ENST00000599470 SYNJ1O43426 1573 aa29.84■■■□□ 2.37
PAK4-209ENST00000599470 TOP2BQ02880 1626 aa29.72■■■□□ 2.35
PAK4-209ENST00000599470 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
PAK4-209ENST00000599470 FAM9AQ8IZU1 332 aaPredicted RBP29.68■■■□□ 2.34
PAK4-209ENST00000599470 DNAJC5BQ9UF47 199 aa29.66■■■□□ 2.34
PAK4-209ENST00000599470 LOC105371045A0A1W2PR82 267 aa29.65■■■□□ 2.34
PAK4-209ENST00000599470 LAMC3Q9Y6N6 1575 aa29.64■■■□□ 2.33
PAK4-209ENST00000599470 CUX1P39880 1505 aa29.61■■■□□ 2.33
PAK4-209ENST00000599470 NESP48681 1621 aa29.6■■■□□ 2.33
PAK4-209ENST00000599470 SOGA1O94964 1423 aa29.57■■■□□ 2.32
PAK4-209ENST00000599470 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
PAK4-209ENST00000599470 EEA1Q15075 1411 aa29.53■■■□□ 2.32
PAK4-209ENST00000599470 RUSC2Q8N2Y8 1516 aa29.47■■■□□ 2.31
PAK4-209ENST00000599470 CEP164Q9UPV0 1460 aa29.36■■■□□ 2.29
PAK4-209ENST00000599470 PDS5BQ9NTI5 1447 aa29.35■■■□□ 2.29
PAK4-209ENST00000599470 DNMBPQ6XZF7 1577 aa29.33■■■□□ 2.29
PAK4-209ENST00000599470 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
PAK4-209ENST00000599470 KIF21AQ7Z4S6 1674 aa29.3■■■□□ 2.28
PAK4-209ENST00000599470 FGD5Q6ZNL6 1462 aa29.26■■■□□ 2.27
PAK4-209ENST00000599470 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
PAK4-209ENST00000599470 EHMT2Q96KQ7 1210 aa29.23■■■□□ 2.27
PAK4-209ENST00000599470 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.26
PAK4-209ENST00000599470 KIF21BO75037 1637 aa29.19■■■□□ 2.26
PAK4-209ENST00000599470 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
PAK4-209ENST00000599470 GOLGA3Q08378 1498 aa29.14■■■□□ 2.26
PAK4-209ENST00000599470 POLA1P09884 1462 aaPredicted RBP29.12■■■□□ 2.25
PAK4-209ENST00000599470 CUX2O14529 1486 aa29.07■■■□□ 2.24
PAK4-209ENST00000599470 TNIKQ9UKE5 1360 aa29.05■■■□□ 2.24
PAK4-209ENST00000599470 ABCA10Q8WWZ4 1543 aa29.01■■■□□ 2.24
PAK4-209ENST00000599470 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.23
PAK4-209ENST00000599470 RAD54L2Q9Y4B4 1467 aa29.01■■■□□ 2.23
PAK4-209ENST00000599470 PRXQ9BXM0 1461 aa29■■■□□ 2.23
PAK4-209ENST00000599470 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
PAK4-209ENST00000599470 RAPGEF2Q9Y4G8 1499 aa28.98■■■□□ 2.23
PAK4-209ENST00000599470 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
PAK4-209ENST00000599470 UBTFP17480 764 aaKnown RBP28.93■■■□□ 2.22
PAK4-209ENST00000599470 CEP162Q5TB80 1403 aa28.9■■■□□ 2.22
PAK4-209ENST00000599470 IGF1RP08069 1367 aa28.88■■■□□ 2.21
PAK4-209ENST00000599470 WDR62O43379 1518 aa28.87■■■□□ 2.21
PAK4-209ENST00000599470 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
PAK4-209ENST00000599470 TARBP1Q13395 1621 aaKnown RBP28.84■■■□□ 2.21
PAK4-209ENST00000599470 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
PAK4-209ENST00000599470 THOC2Q8NI27 1593 aaKnown RBP28.8■■■□□ 2.2
PAK4-209ENST00000599470 CARMIL1Q5VZK9 1371 aa28.73■■■□□ 2.19
PAK4-209ENST00000599470 CUL7Q14999 1698 aa28.72■■■□□ 2.19
PAK4-209ENST00000599470 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
PAK4-209ENST00000599470 GAPVD1Q14C86 1478 aa28.69■■■□□ 2.18
PAK4-209ENST00000599470 CLIP1P30622 1438 aa28.66■■■□□ 2.18
PAK4-209ENST00000599470 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
PAK4-209ENST00000599470 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
PAK4-209ENST00000599470 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.153e-12■■■■■ 47.9
PAK4-209ENST00000599470 ZNF608Q9ULD9 1512 aaPredicted RBP28.49■■■□□ 2.15
PAK4-209ENST00000599470 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
PAK4-209ENST00000599470 CTTNBP2Q8WZ74 1663 aa28.44■■■□□ 2.14
PAK4-209ENST00000599470 EIF4G3O43432 1585 aaKnown RBP28.44■■■□□ 2.14
PAK4-209ENST00000599470 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
PAK4-209ENST00000599470 ADAMTS12P58397 1594 aa28.42■■■□□ 2.14
PAK4-209ENST00000599470 RANGAP1P46060 587 aaPredicted RBP28.41■■■□□ 2.14
PAK4-209ENST00000599470 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
PAK4-209ENST00000599470 ARHGAP35Q9NRY4 1499 aa28.38■■■□□ 2.13
PAK4-209ENST00000599470 FHAD1B1AJZ9 1412 aa28.38■■■□□ 2.13
PAK4-209ENST00000599470 TRIM26Q12899 539 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms