Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 IGF1R-212ENST00000560186 551 ntTSL 413.79□□□□□ -0.22e-6■■■□□ 14.9
MATR3P43243 GPATCH8-211ENST00000635257 5602 ntTSL 513.43□□□□□ -0.262e-7■■■□□ 14.9
MATR3P43243 ILVBL-206ENST00000533086 4248 ntTSL 212.22□□□□□ -0.452e-7■■■□□ 14.9
MATR3P43243 ZFP90-205ENST00000564558 4664 ntTSL 1 (best)12.04□□□□□ -0.482e-7■■■□□ 14.9
MATR3P43243 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.512e-7■■■□□ 14.9
MATR3P43243 CHPT1-206ENST00000550385 754 ntTSL 511.61□□□□□ -0.552e-7■■■□□ 14.9
MATR3P43243 GPATCH8-205ENST00000587228 4713 ntTSL 1 (best)11.36□□□□□ -0.592e-7■■■□□ 14.9
MATR3P43243 UCP2-208ENST00000544615 1004 ntTSL 210.9□□□□□ -0.662e-17■■■□□ 14.9
MATR3P43243 GPATCH8-202ENST00000585614 686 ntTSL 310.47□□□□□ -0.732e-7■■■□□ 14.9
MATR3P43243 GPATCH8-201ENST00000335500 8109 ntTSL 210.14□□□□□ -0.792e-7■■■□□ 14.9
MATR3P43243 IRF2-201ENST00000393593 2303 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.812e-7■■■□□ 14.9
MATR3P43243 IGF1R-213ENST00000560277 526 ntTSL 49.68□□□□□ -0.862e-6■■■□□ 14.9
MATR3P43243 CHPT1-208ENST00000552215 4342 ntTSL 1 (best)9.26□□□□□ -0.932e-7■■■□□ 14.9
MATR3P43243 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.982e-7■■■□□ 14.9
MATR3P43243 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.012e-7■■■□□ 14.9
MATR3P43243 IRF2-209ENST00000512020 731 ntTSL 38.71□□□□□ -1.022e-7■■■□□ 14.9
MATR3P43243 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.032e-7■■■□□ 14.9
MATR3P43243 GRK3-202ENST00000455558 657 ntTSL 58.54□□□□□ -1.042e-7■■■□□ 14.9
MATR3P43243 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.062e-7■■■□□ 14.9
MATR3P43243 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.062e-7■■■□□ 14.9
MATR3P43243 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.76□□□□□ -1.172e-7■■■□□ 14.9
MATR3P43243 SPAG9-219ENST00000514613 2523 ntTSL 27.66□□□□□ -1.182e-7■■■□□ 14.9
MATR3P43243 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.52□□□□□ -1.212e-7■■■□□ 14.9
MATR3P43243 ZFP90-214ENST00000573113 505 ntTSL 27.47□□□□□ -1.212e-7■■■□□ 14.9
MATR3P43243 SPAG9-204ENST00000505173 2369 ntTSL 57.11□□□□□ -1.272e-7■■■□□ 14.9
MATR3P43243 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.91□□□□□ -1.32e-7■■■□□ 14.9
MATR3P43243 MTMR3-206ENST00000415511 604 ntTSL 36.91□□□□□ -1.31e-10■■■□□ 14.9
MATR3P43243 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.392e-7■■■□□ 14.9
MATR3P43243 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.412e-7■■■□□ 14.9
MATR3P43243 MPC1-205ENST00000487218 918 ntTSL 55.81□□□□□ -1.482e-7■■■□□ 14.9
MATR3P43243 IRF2-206ENST00000507523 595 ntTSL 45.71□□□□□ -1.52e-7■■■□□ 14.9
MATR3P43243 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.11□□□□□ -1.592e-7■■■□□ 14.9
MATR3P43243 GPATCH8-207ENST00000590041 829 ntTSL 53.94□□□□□ -1.782e-7■■■□□ 14.9
MATR3P43243 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.88□□□□□ -1.792e-7■■■□□ 14.9
MATR3P43243 SPAG9-212ENST00000511795 522 ntTSL 53.8□□□□□ -1.82e-7■■■□□ 14.9
MATR3P43243 SPAG9-221ENST00000576492 554 ntTSL 53.57□□□□□ -1.842e-7■■■□□ 14.9
MATR3P43243 ZFP90-212ENST00000571720 3901 nt3.13□□□□□ -1.912e-7■■■□□ 14.9
MATR3P43243 MPC1-204ENST00000475708 651 ntTSL 52.45□□□□□ -2.022e-7■■■□□ 14.9
MATR3P43243 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.73■□□□□ 0.912e-6■■■□□ 14.9
MATR3P43243 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.282e-6■■■□□ 14.9
MATR3P43243 RAB2A-205ENST00000466595 866 ntTSL 312.98□□□□□ -0.332e-6■■■□□ 14.9
MATR3P43243 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC10.87□□□□□ -0.672e-6■■■□□ 14.9
MATR3P43243 RAB2A-203ENST00000429861 594 ntTSL 23□□□□□ -1.932e-6■■■□□ 14.9
MATR3P43243 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.627e-7■■■□□ 14.9
MATR3P43243 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.67e-7■■■□□ 14.9
MATR3P43243 MED15-227ENST00000486656 577 ntTSL 420.5■□□□□ 0.873e-6■■■□□ 14.9
MATR3P43243 MED15-217ENST00000445987 590 ntTSL 417.51■□□□□ 0.393e-6■■■□□ 14.9
MATR3P43243 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.88■□□□□ 0.291e-6■■■□□ 14.9
MATR3P43243 PNPLA3-202ENST00000406117 1480 ntTSL 216.58■□□□□ 0.241e-6■■■□□ 14.9
MATR3P43243 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.221e-6■■■□□ 14.9
MATR3P43243 SPATS2L-210ENST00000421573 600 ntTSL 511.84□□□□□ -0.514e-8■■■□□ 14.9
MATR3P43243 SPATS2L-213ENST00000438761 887 ntTSL 58.17□□□□□ -1.14e-8■■■□□ 14.9
MATR3P43243 SPATS2L-217ENST00000449647 678 ntTSL 57.49□□□□□ -1.214e-8■■■□□ 14.9
MATR3P43243 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC10.97□□□□□ -0.654e-6■■■□□ 14.9
MATR3P43243 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.924e-6■■■□□ 14.9
MATR3P43243 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC15.22■□□□□ 0.031e-6■■■□□ 14.9
MATR3P43243 FOXN3-217ENST00000557572 513 ntTSL 33.41□□□□□ -1.863e-6■■■□□ 14.9
MATR3P43243 UQCC1-209ENST00000397556 1284 ntTSL 1 (best) BASIC13.36□□□□□ -0.273e-6■■■□□ 14.9
MATR3P43243 UQCC1-222ENST00000497717 471 ntTSL 58.5□□□□□ -1.053e-6■■■□□ 14.9
MATR3P43243 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.123e-7■■■□□ 14.8
MATR3P43243 SDHAF3-204ENST00000489852 360 ntTSL 315.65■□□□□ 0.13e-7■■■□□ 14.8
MATR3P43243 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.653e-7■■■□□ 14.8
MATR3P43243 CDC42BPA-210ENST00000462553 430 ntTSL 58.55□□□□□ -1.043e-7■■■□□ 14.8
MATR3P43243 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.273e-7■■■□□ 14.8
MATR3P43243 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.98□□□□□ -1.293e-7■■■□□ 14.8
MATR3P43243 CDC42BPA-212ENST00000478573 599 ntTSL 53.86□□□□□ -1.793e-7■■■□□ 14.8
MATR3P43243 LEMD2-203ENST00000442696 839 ntTSL 524.52■■□□□ 1.521e-7■■■□□ 14.8
MATR3P43243 LEMD2-202ENST00000421671 2323 ntTSL 323.6■■□□□ 1.371e-7■■■□□ 14.8
MATR3P43243 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.021e-7■■■□□ 14.8
MATR3P43243 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.81e-7■■■□□ 14.8
MATR3P43243 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.332e-9■■■□□ 14.8
MATR3P43243 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.161e-7■■■□□ 14.8
MATR3P43243 RPS6KA3-202ENST00000438357 530 ntTSL 516.25■□□□□ 0.192e-7■■■□□ 14.8
MATR3P43243 RPS6KA3-206ENST00000492128 553 ntTSL 49.9□□□□□ -0.822e-7■■■□□ 14.8
MATR3P43243 PLD1-204ENST00000418087 621 ntTSL 45.51□□□□□ -1.531e-6■■■□□ 14.8
MATR3P43243 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.083e-6■■■□□ 14.8
MATR3P43243 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.943e-6■■■□□ 14.8
MATR3P43243 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.54□□□□□ -1.523e-6■■■□□ 14.8
MATR3P43243 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.941e-7■■■□□ 14.8
MATR3P43243 CHD3-204ENST00000439235 1263 ntTSL 522.63■■□□□ 1.213e-8■■■□□ 14.8
MATR3P43243 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.434e-6■■■□□ 14.8
MATR3P43243 CHD3-205ENST00000449744 880 ntTSL 216.73■□□□□ 0.273e-8■■■□□ 14.8
MATR3P43243 CHD3-211ENST00000481999 2515 ntTSL 215.6■□□□□ 0.093e-8■■■□□ 14.8
MATR3P43243 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC15.09■□□□□ 0.013e-8■■■□□ 14.8
MATR3P43243 CHD3-208ENST00000470531 3744 ntTSL 212.34□□□□□ -0.433e-8■■■□□ 14.8
MATR3P43243 CHD3-216ENST00000573936 749 ntTSL 312.07□□□□□ -0.483e-8■■■□□ 14.8
MATR3P43243 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.493e-8■■■□□ 14.8
MATR3P43243 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.493e-8■■■□□ 14.8
MATR3P43243 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.94e-6■■■□□ 14.8
MATR3P43243 LIMS1-208ENST00000428064 637 ntTSL 222.86■■□□□ 1.251e-8■■■□□ 14.8
MATR3P43243 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.211e-8■■■□□ 14.8
MATR3P43243 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.051e-8■■■□□ 14.8
MATR3P43243 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.961e-8■■■□□ 14.8
MATR3P43243 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.142e-6■■■□□ 14.8
MATR3P43243 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.642e-6■■■□□ 14.8
MATR3P43243 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.182e-6■■■□□ 14.8
MATR3P43243 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.78□□□□□ -0.041e-6■■■□□ 14.7
MATR3P43243 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.51□□□□□ -1.213e-6■■■□□ 14.7
MATR3P43243 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.82□□□□□ -1.963e-6■■■□□ 14.7
MATR3P43243 SPCS2-208ENST00000532972 839 ntTSL 219.62■□□□□ 0.735e-7■■■□□ 14.7
Retrieved 100 of 16,209 protein–RNA pairs in 118.2 ms