RNA–Protein interactions for RNA: ENST00000532972.5

SPCS2-208, Transcript of signal peptidase complex subunit 2, humanhuman

TSL 2

Gene SPCS2, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2-208ENST00000532972 NISCHQ9Y2I1 1504 aa44.07■■■■■ 4.65
SPCS2-208ENST00000532972 CCDC180Q9P1Z9 1646 aa39.21■■■■□ 3.87
SPCS2-208ENST00000532972 ABCC9O60706 1549 aa38.43■■■■□ 3.74
SPCS2-208ENST00000532972 RB1CC1Q8TDY2 1594 aa36.91■■■■□ 3.5
SPCS2-208ENST00000532972 NACADO15069 1562 aa36.86■■■■□ 3.49
SPCS2-208ENST00000532972 ZCCHC6Q5VYS8 1495 aaKnown RBP36.71■■■■□ 3.47
SPCS2-208ENST00000532972 DCAF8L2P0C7V8 631 aa36.71■■■■□ 3.47
SPCS2-208ENST00000532972 MYO15BQ96JP2 1530 aa36.64■■■■□ 3.46
SPCS2-208ENST00000532972 DCAF1Q9Y4B6 1507 aa36.46■■■■□ 3.43
SPCS2-208ENST00000532972 UNC13AQ9UPW8 1703 aa36.16■■■■□ 3.38
SPCS2-208ENST00000532972 BICRAQ9NZM4 1560 aa35.89■■■■□ 3.34
SPCS2-208ENST00000532972 PABPN1Q86U42 306 aaKnown RBP eCLIP35.87■■■■□ 3.33
SPCS2-208ENST00000532972 SCRIBQ14160 1630 aa35.76■■■■□ 3.32
SPCS2-208ENST00000532972 DNAJC5BQ9UF47 199 aa35.62■■■■□ 3.29
SPCS2-208ENST00000532972 SHROOM4Q9ULL8 1493 aa35.42■■■■□ 3.26
SPCS2-208ENST00000532972 EIF4G1Q04637 1599 aaKnown RBP34.9■■■■□ 3.18
SPCS2-208ENST00000532972 CC2D2AQ9P2K1 1620 aa34.77■■■■□ 3.16
SPCS2-208ENST00000532972 CECR2Q9BXF3 1484 aa34.52■■■■□ 3.12
SPCS2-208ENST00000532972 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
SPCS2-208ENST00000532972 BAZ1AQ9NRL2 1556 aaPredicted RBP34.13■■■■□ 3.05
SPCS2-208ENST00000532972 ATAD2BQ9ULI0 1458 aa34.05■■■■□ 3.04
SPCS2-208ENST00000532972 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
SPCS2-208ENST00000532972 MROH2BQ7Z745 1585 aa33.98■■■■□ 3.03
SPCS2-208ENST00000532972 SMARCA2P51531 1590 aa33.96■■■■□ 3.03
SPCS2-208ENST00000532972 PEG3Q9GZU2 1588 aa33.9■■■■□ 3.02
SPCS2-208ENST00000532972 HMGXB3Q12766 1538 aa33.86■■■■□ 3.01
SPCS2-208ENST00000532972 BAZ1BQ9UIG0 1483 aaKnown RBP33.72■■■□□ 2.99
SPCS2-208ENST00000532972 WIZO95785 1651 aa33.61■■■□□ 2.97
SPCS2-208ENST00000532972 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
SPCS2-208ENST00000532972 NESP48681 1621 aa33.26■■■□□ 2.91
SPCS2-208ENST00000532972 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
SPCS2-208ENST00000532972 LAMC3Q9Y6N6 1575 aa33.13■■■□□ 2.89
SPCS2-208ENST00000532972 ERCC6Q03468 1493 aa33.06■■■□□ 2.88
SPCS2-208ENST00000532972 CADPSQ9ULU8 1353 aa33.01■■■□□ 2.88
SPCS2-208ENST00000532972 CUX2O14529 1486 aa32.96■■■□□ 2.87
SPCS2-208ENST00000532972 PDS5BQ9NTI5 1447 aa32.87■■■□□ 2.85
SPCS2-208ENST00000532972 KIF21AQ7Z4S6 1674 aa32.87■■■□□ 2.85
SPCS2-208ENST00000532972 CCDC88BA6NC98 1476 aa32.84■■■□□ 2.85
SPCS2-208ENST00000532972 CFTRP13569 1480 aa32.83■■■□□ 2.85
SPCS2-208ENST00000532972 THOC2Q8NI27 1593 aaKnown RBP32.8■■■□□ 2.84
SPCS2-208ENST00000532972 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
SPCS2-208ENST00000532972 DNAJC5Q9H3Z4 198 aa32.61■■■□□ 2.81
SPCS2-208ENST00000532972 CEP164Q9UPV0 1460 aa32.59■■■□□ 2.81
SPCS2-208ENST00000532972 PRDM2Q13029 1718 aa32.58■■■□□ 2.81
SPCS2-208ENST00000532972 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
SPCS2-208ENST00000532972 SUPT5HO00267 1087 aaKnown RBP32.54■■■□□ 2.8
SPCS2-208ENST00000532972 WDR62O43379 1518 aa32.51■■■□□ 2.79
SPCS2-208ENST00000532972 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
SPCS2-208ENST00000532972 TOPBP1Q92547 1522 aa32.13■■■□□ 2.73
SPCS2-208ENST00000532972 DNMBPQ6XZF7 1577 aa32.08■■■□□ 2.73
SPCS2-208ENST00000532972 ABCC8Q09428 1581 aa32.06■■■□□ 2.72
SPCS2-208ENST00000532972 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
SPCS2-208ENST00000532972 CUX1P39880 1505 aa31.88■■■□□ 2.69
SPCS2-208ENST00000532972 POLA1P09884 1462 aaPredicted RBP31.85■■■□□ 2.69
SPCS2-208ENST00000532972 ZNF608Q9ULD9 1512 aaPredicted RBP31.83■■■□□ 2.69
SPCS2-208ENST00000532972 TARBP1Q13395 1621 aaKnown RBP31.81■■■□□ 2.68
SPCS2-208ENST00000532972 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.67
SPCS2-208ENST00000532972 RAD54L2Q9Y4B4 1467 aa31.72■■■□□ 2.67
SPCS2-208ENST00000532972 EIF4G3O43432 1585 aaKnown RBP31.69■■■□□ 2.66
SPCS2-208ENST00000532972 SOGA1O94964 1423 aa31.68■■■□□ 2.66
SPCS2-208ENST00000532972 AQRO60306 1485 aaKnown RBP eCLIP31.6■■■□□ 2.659e-7■■■■□ 25
SPCS2-208ENST00000532972 WRNQ14191 1432 aaPredicted RBP eCLIP31.59■■■□□ 2.65
SPCS2-208ENST00000532972 BIVM-ERCC5R4GMW8 1640 aa31.58■■■□□ 2.65
SPCS2-208ENST00000532972 SYNJ1O43426 1573 aa31.57■■■□□ 2.64
SPCS2-208ENST00000532972 TOP2BQ02880 1626 aa31.57■■■□□ 2.64
SPCS2-208ENST00000532972 WDR97A6NE52 1622 aa31.55■■■□□ 2.64
SPCS2-208ENST00000532972 TDRD9Q8NDG6 1382 aaKnown RBP31.52■■■□□ 2.64
SPCS2-208ENST00000532972 ABCA10Q8WWZ4 1543 aa31.45■■■□□ 2.63
SPCS2-208ENST00000532972 OSCARQ8IYS5 282 aa31.44■■■□□ 2.62
SPCS2-208ENST00000532972 ABCA5Q8WWZ7 1642 aa31.35■■■□□ 2.61
SPCS2-208ENST00000532972 GRIN2BQ13224 1484 aa31.33■■■□□ 2.61
SPCS2-208ENST00000532972 GAPVD1Q14C86 1478 aa31.33■■■□□ 2.61
SPCS2-208ENST00000532972 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
SPCS2-208ENST00000532972 CHD1O14646 1710 aa31.31■■■□□ 2.6
SPCS2-208ENST00000532972 PBRM1Q86U86 1689 aa31.29■■■□□ 2.6
SPCS2-208ENST00000532972 MAGI1Q96QZ7 1491 aaPredicted RBP31.26■■■□□ 2.59
SPCS2-208ENST00000532972 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
SPCS2-208ENST00000532972 FBLN2P98095 1184 aa31.15■■■□□ 2.58
SPCS2-208ENST00000532972 SYNJ2O15056 1496 aa31.14■■■□□ 2.57
SPCS2-208ENST00000532972 CHMP7Q8WUX9 453 aaPredicted RBP31.07■■■□□ 2.56
SPCS2-208ENST00000532972 ERICH3Q5RHP9 1530 aa31.06■■■□□ 2.56
SPCS2-208ENST00000532972 ADAMTS12P58397 1594 aa31.05■■■□□ 2.56
SPCS2-208ENST00000532972 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
SPCS2-208ENST00000532972 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
SPCS2-208ENST00000532972 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
SPCS2-208ENST00000532972 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
SPCS2-208ENST00000532972 FHAD1B1AJZ9 1412 aa30.96■■■□□ 2.55
SPCS2-208ENST00000532972 ARHGEF11O15085 1522 aa30.95■■■□□ 2.55
SPCS2-208ENST00000532972 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
SPCS2-208ENST00000532972 KIF27Q86VH2 1401 aa30.91■■■□□ 2.54
SPCS2-208ENST00000532972 IGF1RP08069 1367 aa30.84■■■□□ 2.53
SPCS2-208ENST00000532972 NUP160Q12769 1436 aa30.83■■■□□ 2.53
SPCS2-208ENST00000532972 CEP170Q5SW79 1584 aa30.83■■■□□ 2.53
SPCS2-208ENST00000532972 CUL7Q14999 1698 aa30.75■■■□□ 2.51
SPCS2-208ENST00000532972 ARAP1Q96P48 1450 aa30.7■■■□□ 2.51
SPCS2-208ENST00000532972 RUSC2Q8N2Y8 1516 aa30.69■■■□□ 2.5
SPCS2-208ENST00000532972 CYB5RLQ6IPT4 315 aa30.64■■■□□ 2.5
SPCS2-208ENST00000532972 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
SPCS2-208ENST00000532972 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
SPCS2-208ENST00000532972 ERCC6L2Q5T890 1561 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms