RNA–Protein interactions for RNA: ENST00000406117.6

PNPLA3-202, Transcript of patatin like phospholipase domain containing 3, humanhuman

TSL 2

Gene PNPLA3, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3-202ENST00000406117 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
PNPLA3-202ENST00000406117 CCDC180Q9P1Z9 1646 aa32.78■■■□□ 2.84
PNPLA3-202ENST00000406117 ABCC9O60706 1549 aa32.03■■■□□ 2.72
PNPLA3-202ENST00000406117 RB1CC1Q8TDY2 1594 aa30.8■■■□□ 2.52
PNPLA3-202ENST00000406117 NACADO15069 1562 aa30.75■■■□□ 2.51
PNPLA3-202ENST00000406117 ZCCHC6Q5VYS8 1495 aaKnown RBP30.73■■■□□ 2.51
PNPLA3-202ENST00000406117 DCAF8L2P0C7V8 631 aa30.72■■■□□ 2.51
PNPLA3-202ENST00000406117 MYO15BQ96JP2 1530 aa30.56■■■□□ 2.48
PNPLA3-202ENST00000406117 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
PNPLA3-202ENST00000406117 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
PNPLA3-202ENST00000406117 SCRIBQ14160 1630 aa29.95■■■□□ 2.39
PNPLA3-202ENST00000406117 BICRAQ9NZM4 1560 aa29.91■■■□□ 2.38
PNPLA3-202ENST00000406117 PABPN1Q86U42 306 aaKnown RBP eCLIP29.9■■■□□ 2.38
PNPLA3-202ENST00000406117 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.32
PNPLA3-202ENST00000406117 DNAJC5BQ9UF47 199 aa29.32■■■□□ 2.28
PNPLA3-202ENST00000406117 EIF4G1Q04637 1599 aaKnown RBP29.1■■■□□ 2.25
PNPLA3-202ENST00000406117 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
PNPLA3-202ENST00000406117 CECR2Q9BXF3 1484 aa28.74■■■□□ 2.19
PNPLA3-202ENST00000406117 SMARCA4P51532 1647 aa28.62■■■□□ 2.17
PNPLA3-202ENST00000406117 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
PNPLA3-202ENST00000406117 MROH2BQ7Z745 1585 aa28.44■■■□□ 2.14
PNPLA3-202ENST00000406117 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
PNPLA3-202ENST00000406117 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
PNPLA3-202ENST00000406117 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
PNPLA3-202ENST00000406117 PEG3Q9GZU2 1588 aa28.31■■■□□ 2.12
PNPLA3-202ENST00000406117 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
PNPLA3-202ENST00000406117 BAZ1BQ9UIG0 1483 aaKnown RBP28.19■■■□□ 2.1
PNPLA3-202ENST00000406117 WIZO95785 1651 aa28.16■■■□□ 2.1
PNPLA3-202ENST00000406117 RSF1Q96T23 1441 aaPredicted RBP28.08■■■□□ 2.09
PNPLA3-202ENST00000406117 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
PNPLA3-202ENST00000406117 NESP48681 1621 aa27.75■■■□□ 2.03
PNPLA3-202ENST00000406117 LAMC3Q9Y6N6 1575 aa27.64■■■□□ 2.02
PNPLA3-202ENST00000406117 ERCC6Q03468 1493 aa27.57■■■□□ 2
PNPLA3-202ENST00000406117 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
PNPLA3-202ENST00000406117 CCDC88BA6NC98 1476 aa27.48■■□□□ 1.99
PNPLA3-202ENST00000406117 KIF21AQ7Z4S6 1674 aa27.45■■□□□ 1.99
PNPLA3-202ENST00000406117 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
PNPLA3-202ENST00000406117 CFTRP13569 1480 aa27.4■■□□□ 1.98
PNPLA3-202ENST00000406117 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
PNPLA3-202ENST00000406117 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
PNPLA3-202ENST00000406117 PRDM2Q13029 1718 aa27.28■■□□□ 1.96
PNPLA3-202ENST00000406117 FANCD2Q9BXW9 1451 aa27.26■■□□□ 1.95
PNPLA3-202ENST00000406117 CUX2O14529 1486 aa27.24■■□□□ 1.95
PNPLA3-202ENST00000406117 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
PNPLA3-202ENST00000406117 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
PNPLA3-202ENST00000406117 WDR62O43379 1518 aa27.11■■□□□ 1.93
PNPLA3-202ENST00000406117 URB2Q14146 1524 aaKnown RBP27.01■■□□□ 1.92
PNPLA3-202ENST00000406117 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
PNPLA3-202ENST00000406117 DNMBPQ6XZF7 1577 aa26.82■■□□□ 1.88
PNPLA3-202ENST00000406117 ABCC8Q09428 1581 aa26.77■■□□□ 1.88
PNPLA3-202ENST00000406117 CUX1P39880 1505 aa26.68■■□□□ 1.86
PNPLA3-202ENST00000406117 IFT140Q96RY7 1462 aa26.63■■□□□ 1.85
PNPLA3-202ENST00000406117 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
PNPLA3-202ENST00000406117 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
PNPLA3-202ENST00000406117 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
PNPLA3-202ENST00000406117 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
PNPLA3-202ENST00000406117 RAD54L2Q9Y4B4 1467 aa26.51■■□□□ 1.83
PNPLA3-202ENST00000406117 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
PNPLA3-202ENST00000406117 SYNJ1O43426 1573 aa26.48■■□□□ 1.83
PNPLA3-202ENST00000406117 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
PNPLA3-202ENST00000406117 SOGA1O94964 1423 aa26.47■■□□□ 1.83
PNPLA3-202ENST00000406117 BIVM-ERCC5R4GMW8 1640 aa26.46■■□□□ 1.83
PNPLA3-202ENST00000406117 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
PNPLA3-202ENST00000406117 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
PNPLA3-202ENST00000406117 AQRO60306 1485 aaKnown RBP eCLIP26.38■■□□□ 1.811e-6■■■■□ 21
PNPLA3-202ENST00000406117 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
PNPLA3-202ENST00000406117 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
PNPLA3-202ENST00000406117 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
PNPLA3-202ENST00000406117 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
PNPLA3-202ENST00000406117 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
PNPLA3-202ENST00000406117 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
PNPLA3-202ENST00000406117 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
PNPLA3-202ENST00000406117 GRIN2BQ13224 1484 aa26.16■■□□□ 1.78
PNPLA3-202ENST00000406117 CHD1O14646 1710 aa26.15■■□□□ 1.78
PNPLA3-202ENST00000406117 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
PNPLA3-202ENST00000406117 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
PNPLA3-202ENST00000406117 FBLN2P98095 1184 aa26.02■■□□□ 1.76
PNPLA3-202ENST00000406117 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
PNPLA3-202ENST00000406117 SYNJ2O15056 1496 aa25.99■■□□□ 1.75
PNPLA3-202ENST00000406117 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
PNPLA3-202ENST00000406117 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
PNPLA3-202ENST00000406117 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
PNPLA3-202ENST00000406117 FHAD1B1AJZ9 1412 aa25.86■■□□□ 1.73
PNPLA3-202ENST00000406117 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
PNPLA3-202ENST00000406117 CLASP1Q7Z460 1538 aa25.84■■□□□ 1.73
PNPLA3-202ENST00000406117 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
PNPLA3-202ENST00000406117 IGF1RP08069 1367 aa25.78■■□□□ 1.72
PNPLA3-202ENST00000406117 RIMBP3CA6NJZ7 1639 aa25.77■■□□□ 1.72
PNPLA3-202ENST00000406117 RIMBP3BA6NNM3 1639 aa25.77■■□□□ 1.72
PNPLA3-202ENST00000406117 RIMBP3Q9UFD9 1639 aa25.77■■□□□ 1.72
PNPLA3-202ENST00000406117 CUL7Q14999 1698 aa25.77■■□□□ 1.72
PNPLA3-202ENST00000406117 CEP170Q5SW79 1584 aa25.76■■□□□ 1.71
PNPLA3-202ENST00000406117 ARHGEF11O15085 1522 aa25.75■■□□□ 1.71
PNPLA3-202ENST00000406117 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
PNPLA3-202ENST00000406117 NUP160Q12769 1436 aa25.72■■□□□ 1.71
PNPLA3-202ENST00000406117 CARMIL1Q5VZK9 1371 aa25.63■■□□□ 1.69
PNPLA3-202ENST00000406117 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
PNPLA3-202ENST00000406117 SHROOM2Q13796 1616 aa25.56■■□□□ 1.68
PNPLA3-202ENST00000406117 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
PNPLA3-202ENST00000406117 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms