RNA–Protein interactions for RNA: ENST00000379391.7

NEMP1-202, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene NEMP1, Length 5,370 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-202ENST00000379391 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
NEMP1-202ENST00000379391 PELP1Q8IZL8 1130 aaKnown RBP15.94■□□□□ 0.14
NEMP1-202ENST00000379391 HRCP23327 699 aa15.88■□□□□ 0.13
NEMP1-202ENST00000379391 PCGF6Q9BYE7 350 aa15.84■□□□□ 0.13
NEMP1-202ENST00000379391 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.12
NEMP1-202ENST00000379391 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
NEMP1-202ENST00000379391 SHROOM4Q9ULL8 1493 aa15.57■□□□□ 0.08
NEMP1-202ENST00000379391 MYT1Q01538 1121 aa15.46■□□□□ 0.07
NEMP1-202ENST00000379391 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
NEMP1-202ENST00000379391 ZEB1P37275 1124 aaPredicted RBP15.11■□□□□ 0.01
NEMP1-202ENST00000379391 CENPBP07199 599 aaPredicted RBP15.04■□□□□ -0
NEMP1-202ENST00000379391 TRIM26Q12899 539 aaPredicted RBP15.03■□□□□ -0
NEMP1-202ENST00000379391 DCAF8L2P0C7V8 631 aa15.02■□□□□ -0
NEMP1-202ENST00000379391 CHIC1Q5VXU3 224 aa15.02■□□□□ -0
NEMP1-202ENST00000379391 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
NEMP1-202ENST00000379391 LOC105371045A0A1W2PR82 267 aa14.95□□□□□ -0.02
NEMP1-202ENST00000379391 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
NEMP1-202ENST00000379391 ACIN1Q9UKV3 1341 aaKnown RBP14.83□□□□□ -0.04
NEMP1-202ENST00000379391 YTHDC1Q96MU7 727 aaKnown RBP14.83□□□□□ -0.04
NEMP1-202ENST00000379391 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
NEMP1-202ENST00000379391 CCER1Q8TC90 406 aaPredicted RBP14.76□□□□□ -0.05
NEMP1-202ENST00000379391 NEUROD1Q13562 356 aa14.75□□□□□ -0.05
NEMP1-202ENST00000379391 FAM9AQ8IZU1 332 aaPredicted RBP14.74□□□□□ -0.05
NEMP1-202ENST00000379391 DIEXFQ68CQ4 756 aaKnown RBP14.63□□□□□ -0.07
NEMP1-202ENST00000379391 TTBK1Q5TCY1 1321 aaPredicted RBP14.61□□□□□ -0.07
NEMP1-202ENST00000379391 DCAF1Q9Y4B6 1507 aa14.58□□□□□ -0.07
NEMP1-202ENST00000379391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.56□□□□□ -0.08
NEMP1-202ENST00000379391 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
NEMP1-202ENST00000379391 CCDC180Q9P1Z9 1646 aa14.34□□□□□ -0.11
NEMP1-202ENST00000379391 BCL11AQ9H165 835 aa14.31□□□□□ -0.12
NEMP1-202ENST00000379391 ERICH6Q7L0X2 663 aa14.24□□□□□ -0.13
NEMP1-202ENST00000379391 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
NEMP1-202ENST00000379391 ANP32EQ9BTT0 268 aa14.16□□□□□ -0.14
NEMP1-202ENST00000379391 BCANQ96GW7 911 aa14.13□□□□□ -0.15
NEMP1-202ENST00000379391 MIER1Q8N108 512 aa14.1□□□□□ -0.15
NEMP1-202ENST00000379391 NEFLP07196 543 aa14.05□□□□□ -0.16
NEMP1-202ENST00000379391 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
NEMP1-202ENST00000379391 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
NEMP1-202ENST00000379391 APLP2Q06481 763 aa13.93□□□□□ -0.18
NEMP1-202ENST00000379391 SUPT16HQ9Y5B9 1047 aaKnown RBP13.92□□□□□ -0.18
NEMP1-202ENST00000379391 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
NEMP1-202ENST00000379391 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
NEMP1-202ENST00000379391 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
NEMP1-202ENST00000379391 RANGAP1P46060 587 aaPredicted RBP13.84□□□□□ -0.19
NEMP1-202ENST00000379391 FKBP8Q14318 412 aa13.83□□□□□ -0.19
NEMP1-202ENST00000379391 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
NEMP1-202ENST00000379391 PRKCSHP14314 528 aaPredicted RBP13.74□□□□□ -0.21
NEMP1-202ENST00000379391 ITGAEP38570 1179 aa13.74□□□□□ -0.21
NEMP1-202ENST00000379391 CDK11AQ9UQ88 783 aaPredicted RBP13.66□□□□□ -0.22
NEMP1-202ENST00000379391 RBM19Q9Y4C8 960 aaKnown RBP13.66□□□□□ -0.22
NEMP1-202ENST00000379391 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
NEMP1-202ENST00000379391 NBR1Q14596 966 aa13.6□□□□□ -0.23
NEMP1-202ENST00000379391 TRIM52Q96A61 297 aa13.56□□□□□ -0.24
NEMP1-202ENST00000379391 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
NEMP1-202ENST00000379391 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
NEMP1-202ENST00000379391 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
NEMP1-202ENST00000379391 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
NEMP1-202ENST00000379391 DDX10Q13206 875 aaKnown RBP13.48□□□□□ -0.25
NEMP1-202ENST00000379391 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
NEMP1-202ENST00000379391 ANP32CO43423 234 aa13.45□□□□□ -0.26
NEMP1-202ENST00000379391 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
NEMP1-202ENST00000379391 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
NEMP1-202ENST00000379391 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
NEMP1-202ENST00000379391 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
NEMP1-202ENST00000379391 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
NEMP1-202ENST00000379391 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
NEMP1-202ENST00000379391 ANP32AP39687 249 aaKnown RBP13.34□□□□□ -0.27
NEMP1-202ENST00000379391 RSF1Q96T23 1441 aaPredicted RBP13.34□□□□□ -0.27
NEMP1-202ENST00000379391 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.27
NEMP1-202ENST00000379391 CNGB1Q14028 1251 aaPredicted RBP13.31□□□□□ -0.28
NEMP1-202ENST00000379391 MSH5O43196 834 aa13.3□□□□□ -0.28
NEMP1-202ENST00000379391 NPM2Q86SE8 214 aaKnown RBP13.3□□□□□ -0.28
NEMP1-202ENST00000379391 NOP58Q9Y2X3 529 aaKnown RBP13.29□□□□□ -0.28
NEMP1-202ENST00000379391 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.28
NEMP1-202ENST00000379391 SALL2Q9Y467 1007 aaPredicted RBP13.26□□□□□ -0.29
NEMP1-202ENST00000379391 ATP1B4Q9UN42 357 aaPredicted RBP13.25□□□□□ -0.29
NEMP1-202ENST00000379391 DAXXQ9UER7 740 aaPredicted RBP13.24□□□□□ -0.29
NEMP1-202ENST00000379391 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
NEMP1-202ENST00000379391 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
NEMP1-202ENST00000379391 B4GALNT3Q6L9W6 998 aa13.2□□□□□ -0.3
NEMP1-202ENST00000379391 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
NEMP1-202ENST00000379391 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
NEMP1-202ENST00000379391 WRNQ14191 1432 aaPredicted RBP eCLIP13.15□□□□□ -0.3
NEMP1-202ENST00000379391 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
NEMP1-202ENST00000379391 FAM50AQ14320 339 aaKnown RBP13.15□□□□□ -0.3
NEMP1-202ENST00000379391 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
NEMP1-202ENST00000379391 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
NEMP1-202ENST00000379391 POLR3GLQ9BT43 218 aa13.13□□□□□ -0.31
NEMP1-202ENST00000379391 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
NEMP1-202ENST00000379391 SCRIBQ14160 1630 aa13.12□□□□□ -0.31
NEMP1-202ENST00000379391 CLIP1P30622 1438 aa13.11□□□□□ -0.31
NEMP1-202ENST00000379391 NEFMP07197 916 aa13.1□□□□□ -0.31
NEMP1-202ENST00000379391 ABCC9O60706 1549 aa13.09□□□□□ -0.31
NEMP1-202ENST00000379391 SOGA1O94964 1423 aa13.08□□□□□ -0.32
NEMP1-202ENST00000379391 SIN3AQ96ST3 1273 aa13.07□□□□□ -0.32
NEMP1-202ENST00000379391 DHX57Q6P158 1386 aaKnown RBP13.06□□□□□ -0.32
NEMP1-202ENST00000379391 GLIPR1L2Q4G1C9 344 aa13.06□□□□□ -0.32
NEMP1-202ENST00000379391 CCER2I3L3R5 266 aa13.06□□□□□ -0.32
NEMP1-202ENST00000379391 GOLGA3Q08378 1498 aa13.05□□□□□ -0.32
NEMP1-202ENST00000379391 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms