RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 NISCHQ9Y2I1 1504 aa44.37■■■■■ 4.69
SDHAF3-202ENST00000432641 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
SDHAF3-202ENST00000432641 ZCCHC6Q5VYS8 1495 aaKnown RBP37.44■■■■□ 3.58
SDHAF3-202ENST00000432641 DCAF1Q9Y4B6 1507 aa36.77■■■■□ 3.48
SDHAF3-202ENST00000432641 SHROOM4Q9ULL8 1493 aa36.61■■■■□ 3.45
SDHAF3-202ENST00000432641 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
SDHAF3-202ENST00000432641 MYO15BQ96JP2 1530 aa36.06■■■■□ 3.36
SDHAF3-202ENST00000432641 SUPT5HO00267 1087 aaKnown RBP35.63■■■■□ 3.29
SDHAF3-202ENST00000432641 NACADO15069 1562 aa35.58■■■■□ 3.29
SDHAF3-202ENST00000432641 ABCC9O60706 1549 aa35.51■■■■□ 3.27
SDHAF3-202ENST00000432641 SCRIBQ14160 1630 aa35.33■■■■□ 3.25
SDHAF3-202ENST00000432641 RB1CC1Q8TDY2 1594 aa35.09■■■■□ 3.21
SDHAF3-202ENST00000432641 RSF1Q96T23 1441 aaPredicted RBP34.69■■■■□ 3.14
SDHAF3-202ENST00000432641 CHIC1Q5VXU3 224 aa34.54■■■■□ 3.12
SDHAF3-202ENST00000432641 UNC13AQ9UPW8 1703 aa34.37■■■■□ 3.09
SDHAF3-202ENST00000432641 CECR2Q9BXF3 1484 aa34.34■■■■□ 3.09
SDHAF3-202ENST00000432641 MROH2BQ7Z745 1585 aa34.26■■■■□ 3.08
SDHAF3-202ENST00000432641 BAZ1AQ9NRL2 1556 aaPredicted RBP34.24■■■■□ 3.07
SDHAF3-202ENST00000432641 WIZO95785 1651 aa34.04■■■■□ 3.04
SDHAF3-202ENST00000432641 SMARCA4P51532 1647 aa33.96■■■■□ 3.03
SDHAF3-202ENST00000432641 BICRAQ9NZM4 1560 aa33.95■■■■□ 3.03
SDHAF3-202ENST00000432641 TOP2AP11388 1531 aaKnown RBP33.76■■■□□ 2.99
SDHAF3-202ENST00000432641 PABPN1Q86U42 306 aaKnown RBP eCLIP33.59■■■□□ 2.97
SDHAF3-202ENST00000432641 PEG3Q9GZU2 1588 aa33.55■■■□□ 2.96
SDHAF3-202ENST00000432641 TRIM41Q8WV44 630 aa33.51■■■□□ 2.95
SDHAF3-202ENST00000432641 EIF4G1Q04637 1599 aaKnown RBP33.48■■■□□ 2.95
SDHAF3-202ENST00000432641 SMARCA2P51531 1590 aa33.44■■■□□ 2.94
SDHAF3-202ENST00000432641 CCDC88BA6NC98 1476 aa33.38■■■□□ 2.93
SDHAF3-202ENST00000432641 ATAD2BQ9ULI0 1458 aa33.19■■■□□ 2.9
SDHAF3-202ENST00000432641 LOC105371045A0A1W2PR82 267 aa33.17■■■□□ 2.9
SDHAF3-202ENST00000432641 BAZ1BQ9UIG0 1483 aaKnown RBP33.07■■■□□ 2.88
SDHAF3-202ENST00000432641 ABCC8Q09428 1581 aa32.89■■■□□ 2.86
SDHAF3-202ENST00000432641 HMGXB3Q12766 1538 aa32.86■■■□□ 2.85
SDHAF3-202ENST00000432641 FAM9AQ8IZU1 332 aaPredicted RBP32.82■■■□□ 2.84
SDHAF3-202ENST00000432641 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
SDHAF3-202ENST00000432641 EEA1Q15075 1411 aa32.68■■■□□ 2.82
SDHAF3-202ENST00000432641 WRNQ14191 1432 aaPredicted RBP eCLIP32.65■■■□□ 2.82
SDHAF3-202ENST00000432641 PCGF6Q9BYE7 350 aa32.5■■■□□ 2.79
SDHAF3-202ENST00000432641 SYNJ1O43426 1573 aa32.46■■■□□ 2.79
SDHAF3-202ENST00000432641 SOGA1O94964 1423 aa32.43■■■□□ 2.78
SDHAF3-202ENST00000432641 TRIM26Q12899 539 aaPredicted RBP32.41■■■□□ 2.78
SDHAF3-202ENST00000432641 TOP2BQ02880 1626 aa32.33■■■□□ 2.77
SDHAF3-202ENST00000432641 CSRNP3Q8WYN3 585 aa32.32■■■□□ 2.76
SDHAF3-202ENST00000432641 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
SDHAF3-202ENST00000432641 CFTRP13569 1480 aa32.28■■■□□ 2.76
SDHAF3-202ENST00000432641 EHMT2Q96KQ7 1210 aa32.27■■■□□ 2.76
SDHAF3-202ENST00000432641 HRCP23327 699 aa32.25■■■□□ 2.75
SDHAF3-202ENST00000432641 TNIKQ9UKE5 1360 aa32.24■■■□□ 2.75
SDHAF3-202ENST00000432641 PRDM2Q13029 1718 aa32.23■■■□□ 2.75
SDHAF3-202ENST00000432641 RUSC2Q8N2Y8 1516 aa32.23■■■□□ 2.75
SDHAF3-202ENST00000432641 GOLGA3Q08378 1498 aa32.2■■■□□ 2.75
SDHAF3-202ENST00000432641 CC2D2AQ9P2K1 1620 aa32.2■■■□□ 2.75
SDHAF3-202ENST00000432641 KIF21BO75037 1637 aa32.17■■■□□ 2.74
SDHAF3-202ENST00000432641 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.74
SDHAF3-202ENST00000432641 CEP162Q5TB80 1403 aa32.1■■■□□ 2.73
SDHAF3-202ENST00000432641 CUX1P39880 1505 aa32.01■■■□□ 2.71
SDHAF3-202ENST00000432641 CADPSQ9ULU8 1353 aa32■■■□□ 2.71
SDHAF3-202ENST00000432641 UBTFP17480 764 aaKnown RBP31.96■■■□□ 2.71
SDHAF3-202ENST00000432641 ERICH3Q5RHP9 1530 aa31.83■■■□□ 2.69
SDHAF3-202ENST00000432641 KIF27Q86VH2 1401 aa31.79■■■□□ 2.68
SDHAF3-202ENST00000432641 RAPGEF2Q9Y4G8 1499 aa31.76■■■□□ 2.67
SDHAF3-202ENST00000432641 PRXQ9BXM0 1461 aa31.74■■■□□ 2.67
SDHAF3-202ENST00000432641 CLIP1P30622 1438 aa31.68■■■□□ 2.66
SDHAF3-202ENST00000432641 FANCD2Q9BXW9 1451 aa31.65■■■□□ 2.66
SDHAF3-202ENST00000432641 ZEB1P37275 1124 aaPredicted RBP31.6■■■□□ 2.65
SDHAF3-202ENST00000432641 LAMC3Q9Y6N6 1575 aa31.59■■■□□ 2.65
SDHAF3-202ENST00000432641 FGD5Q6ZNL6 1462 aa31.54■■■□□ 2.64
SDHAF3-202ENST00000432641 DNMBPQ6XZF7 1577 aa31.54■■■□□ 2.64
SDHAF3-202ENST00000432641 VPS8Q8N3P4 1428 aa31.54■■■□□ 2.64
SDHAF3-202ENST00000432641 PPARGC1BQ86YN6 1023 aaKnown RBP31.5■■■□□ 2.63
SDHAF3-202ENST00000432641 CUX2O14529 1486 aa31.49■■■□□ 2.63
SDHAF3-202ENST00000432641 NESP48681 1621 aa31.4■■■□□ 2.62
SDHAF3-202ENST00000432641 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
SDHAF3-202ENST00000432641 IGF1RP08069 1367 aa31.37■■■□□ 2.61
SDHAF3-202ENST00000432641 ABCA10Q8WWZ4 1543 aa31.33■■■□□ 2.61
SDHAF3-202ENST00000432641 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.6
SDHAF3-202ENST00000432641 POLA1P09884 1462 aaPredicted RBP31.29■■■□□ 2.6
SDHAF3-202ENST00000432641 APLP2Q06481 763 aa31.26■■■□□ 2.6
SDHAF3-202ENST00000432641 ARAP1Q96P48 1450 aa31.25■■■□□ 2.59
SDHAF3-202ENST00000432641 CARMIL1Q5VZK9 1371 aa31.25■■■□□ 2.59
SDHAF3-202ENST00000432641 URB2Q14146 1524 aaKnown RBP31.18■■■□□ 2.58
SDHAF3-202ENST00000432641 CUL7Q14999 1698 aa31.16■■■□□ 2.58
SDHAF3-202ENST00000432641 WDR97A6NE52 1622 aa31.15■■■□□ 2.58
SDHAF3-202ENST00000432641 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
SDHAF3-202ENST00000432641 TTBK1Q5TCY1 1321 aaPredicted RBP31.11■■■□□ 2.57
SDHAF3-202ENST00000432641 ARHGAP35Q9NRY4 1499 aa31.11■■■□□ 2.57
SDHAF3-202ENST00000432641 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
SDHAF3-202ENST00000432641 KIF21AQ7Z4S6 1674 aa31.08■■■□□ 2.57
SDHAF3-202ENST00000432641 ABCA5Q8WWZ7 1642 aa31■■■□□ 2.55
SDHAF3-202ENST00000432641 DNAJC5BQ9UF47 199 aa30.97■■■□□ 2.55
SDHAF3-202ENST00000432641 CCER1Q8TC90 406 aaPredicted RBP30.97■■■□□ 2.55
SDHAF3-202ENST00000432641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.92■■■□□ 2.54
SDHAF3-202ENST00000432641 MAP3K1Q13233 1512 aa30.92■■■□□ 2.54
SDHAF3-202ENST00000432641 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
SDHAF3-202ENST00000432641 EFCAB5A4FU69 1503 aa30.89■■■□□ 2.54
SDHAF3-202ENST00000432641 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.53
SDHAF3-202ENST00000432641 TARBP1Q13395 1621 aaKnown RBP30.86■■■□□ 2.53
SDHAF3-202ENST00000432641 FHAD1B1AJZ9 1412 aa30.86■■■□□ 2.53
SDHAF3-202ENST00000432641 MRC2Q9UBG0 1479 aa30.85■■■□□ 2.53
SDHAF3-202ENST00000432641 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms