RNA–Protein interactions for RNA: ENST00000393241.8

MRE11-203, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MRE11, Length 2,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-203ENST00000393241 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
MRE11-203ENST00000393241 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.45
MRE11-203ENST00000393241 ABCC9O60706 1549 aa11.88□□□□□ -0.51
MRE11-203ENST00000393241 CHIC1Q5VXU3 224 aa11.6□□□□□ -0.55
MRE11-203ENST00000393241 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
MRE11-203ENST00000393241 NACADO15069 1562 aa11.5□□□□□ -0.57
MRE11-203ENST00000393241 MYO15BQ96JP2 1530 aa11.49□□□□□ -0.57
MRE11-203ENST00000393241 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
MRE11-203ENST00000393241 RB1CC1Q8TDY2 1594 aa11.48□□□□□ -0.57
MRE11-203ENST00000393241 DCAF8L2P0C7V8 631 aa11.44□□□□□ -0.58
MRE11-203ENST00000393241 UNC13AQ9UPW8 1703 aa11.23□□□□□ -0.61
MRE11-203ENST00000393241 SCRIBQ14160 1630 aa11.18□□□□□ -0.62
MRE11-203ENST00000393241 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
MRE11-203ENST00000393241 AEBP2Q6ZN18 517 aaPredicted RBP11.1□□□□□ -0.63
MRE11-203ENST00000393241 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
MRE11-203ENST00000393241 SHROOM4Q9ULL8 1493 aa11.04□□□□□ -0.64
MRE11-203ENST00000393241 EIF4G1Q04637 1599 aaKnown RBP10.83□□□□□ -0.68
MRE11-203ENST00000393241 DNAJC5BQ9UF47 199 aa10.83□□□□□ -0.68
MRE11-203ENST00000393241 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
MRE11-203ENST00000393241 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
MRE11-203ENST00000393241 SMARCA4P51532 1647 aa10.72□□□□□ -0.69
MRE11-203ENST00000393241 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.69
MRE11-203ENST00000393241 MROH2BQ7Z745 1585 aa10.68□□□□□ -0.7
MRE11-203ENST00000393241 ATAD2BQ9ULI0 1458 aa10.64□□□□□ -0.71
MRE11-203ENST00000393241 PEG3Q9GZU2 1588 aa10.64□□□□□ -0.71
MRE11-203ENST00000393241 NCAPD3P42695 1498 aa10.62□□□□□ -0.71
MRE11-203ENST00000393241 SMARCA2P51531 1590 aa10.62□□□□□ -0.71
MRE11-203ENST00000393241 RSF1Q96T23 1441 aaPredicted RBP10.59□□□□□ -0.71
MRE11-203ENST00000393241 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
MRE11-203ENST00000393241 WIZO95785 1651 aa10.56□□□□□ -0.72
MRE11-203ENST00000393241 BAZ1BQ9UIG0 1483 aaKnown RBP10.54□□□□□ -0.72
MRE11-203ENST00000393241 TOP2AP11388 1531 aaKnown RBP10.46□□□□□ -0.73
MRE11-203ENST00000393241 PHF23Q9BUL5 403 aaPredicted RBP10.37□□□□□ -0.75
MRE11-203ENST00000393241 SUPT5HO00267 1087 aaKnown RBP10.35□□□□□ -0.75
MRE11-203ENST00000393241 CCDC88BA6NC98 1476 aa10.34□□□□□ -0.75
MRE11-203ENST00000393241 NESP48681 1621 aa10.32□□□□□ -0.76
MRE11-203ENST00000393241 LAMC3Q9Y6N6 1575 aa10.31□□□□□ -0.76
MRE11-203ENST00000393241 CADPSQ9ULU8 1353 aa10.3□□□□□ -0.76
MRE11-203ENST00000393241 CFTRP13569 1480 aa10.27□□□□□ -0.76
MRE11-203ENST00000393241 PDS5BQ9NTI5 1447 aa10.22□□□□□ -0.77
MRE11-203ENST00000393241 ERCC6Q03468 1493 aa10.2□□□□□ -0.78
MRE11-203ENST00000393241 KIF21AQ7Z4S6 1674 aa10.2□□□□□ -0.78
MRE11-203ENST00000393241 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
MRE11-203ENST00000393241 FANCD2Q9BXW9 1451 aa10.18□□□□□ -0.78
MRE11-203ENST00000393241 THOC2Q8NI27 1593 aaKnown RBP10.16□□□□□ -0.78
MRE11-203ENST00000393241 CEP164Q9UPV0 1460 aa10.15□□□□□ -0.78
MRE11-203ENST00000393241 MRC2Q9UBG0 1479 aa10.13□□□□□ -0.79
MRE11-203ENST00000393241 WDR62O43379 1518 aa10.1□□□□□ -0.79
MRE11-203ENST00000393241 CUX2O14529 1486 aa10.09□□□□□ -0.79
MRE11-203ENST00000393241 URB2Q14146 1524 aaKnown RBP10.09□□□□□ -0.79
MRE11-203ENST00000393241 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
MRE11-203ENST00000393241 TOPBP1Q92547 1522 aa10.04□□□□□ -0.8
MRE11-203ENST00000393241 DNMBPQ6XZF7 1577 aa10.04□□□□□ -0.8
MRE11-203ENST00000393241 ABCC8Q09428 1581 aa10.03□□□□□ -0.8
MRE11-203ENST00000393241 CUX1P39880 1505 aa10.01□□□□□ -0.81
MRE11-203ENST00000393241 WRNQ14191 1432 aaPredicted RBP eCLIP9.97□□□□□ -0.81
MRE11-203ENST00000393241 POLA1P09884 1462 aaPredicted RBP9.96□□□□□ -0.82
MRE11-203ENST00000393241 BIVM-ERCC5R4GMW8 1640 aa9.95□□□□□ -0.82
MRE11-203ENST00000393241 SYNJ1O43426 1573 aa9.95□□□□□ -0.82
MRE11-203ENST00000393241 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
MRE11-203ENST00000393241 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
MRE11-203ENST00000393241 IFT140Q96RY7 1462 aa9.95□□□□□ -0.82
MRE11-203ENST00000393241 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
MRE11-203ENST00000393241 SOGA1O94964 1423 aa9.91□□□□□ -0.82
MRE11-203ENST00000393241 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
MRE11-203ENST00000393241 SLC24A1O60721 1099 aa9.91□□□□□ -0.82
MRE11-203ENST00000393241 ZNF608Q9ULD9 1512 aaPredicted RBP9.9□□□□□ -0.83
MRE11-203ENST00000393241 WDR97A6NE52 1622 aa9.88□□□□□ -0.83
MRE11-203ENST00000393241 ABCA10Q8WWZ4 1543 aa9.87□□□□□ -0.83
MRE11-203ENST00000393241 EIF4G3O43432 1585 aaKnown RBP9.86□□□□□ -0.83
MRE11-203ENST00000393241 AQRO60306 1485 aaKnown RBP eCLIP9.84□□□□□ -0.835e-7■■□□□ 13.1
MRE11-203ENST00000393241 TDRD9Q8NDG6 1382 aaKnown RBP9.84□□□□□ -0.83
MRE11-203ENST00000393241 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
MRE11-203ENST00000393241 GAPVD1Q14C86 1478 aa9.8□□□□□ -0.84
MRE11-203ENST00000393241 PLPPR3Q6T4P5 718 aa9.79□□□□□ -0.84
MRE11-203ENST00000393241 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
MRE11-203ENST00000393241 PBRM1Q86U86 1689 aa9.77□□□□□ -0.85
MRE11-203ENST00000393241 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
MRE11-203ENST00000393241 SNAPC4Q5SXM2 1469 aa9.76□□□□□ -0.85
MRE11-203ENST00000393241 MAGI1Q96QZ7 1491 aaPredicted RBP9.75□□□□□ -0.85
MRE11-203ENST00000393241 KIF27Q86VH2 1401 aa9.74□□□□□ -0.85
MRE11-203ENST00000393241 ERICH3Q5RHP9 1530 aa9.74□□□□□ -0.85
MRE11-203ENST00000393241 ADAMTS12P58397 1594 aa9.72□□□□□ -0.85
MRE11-203ENST00000393241 RUSC2Q8N2Y8 1516 aa9.71□□□□□ -0.85
MRE11-203ENST00000393241 SYNJ2O15056 1496 aa9.71□□□□□ -0.85
MRE11-203ENST00000393241 IGF1RP08069 1367 aa9.71□□□□□ -0.85
MRE11-203ENST00000393241 CHD1O14646 1710 aa9.7□□□□□ -0.86
MRE11-203ENST00000393241 FHAD1B1AJZ9 1412 aa9.7□□□□□ -0.86
MRE11-203ENST00000393241 CUL7Q14999 1698 aa9.67□□□□□ -0.86
MRE11-203ENST00000393241 GRIN2AQ12879 1464 aa9.66□□□□□ -0.86
MRE11-203ENST00000393241 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
MRE11-203ENST00000393241 CHMP7Q8WUX9 453 aaPredicted RBP9.66□□□□□ -0.86
MRE11-203ENST00000393241 FBLN2P98095 1184 aa9.65□□□□□ -0.86
MRE11-203ENST00000393241 DNAJC5Q9H3Z4 198 aa9.65□□□□□ -0.86
MRE11-203ENST00000393241 EEA1Q15075 1411 aa9.64□□□□□ -0.87
MRE11-203ENST00000393241 CARMIL1Q5VZK9 1371 aa9.64□□□□□ -0.87
MRE11-203ENST00000393241 CLASP1Q7Z460 1538 aa9.63□□□□□ -0.87
MRE11-203ENST00000393241 NUP160Q12769 1436 aa9.63□□□□□ -0.87
MRE11-203ENST00000393241 CEP170Q5SW79 1584 aa9.62□□□□□ -0.87
MRE11-203ENST00000393241 PRXQ9BXM0 1461 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms