RNA–Protein interactions for RNA: ENST00000323977.7

MRE11-202, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-202ENST00000323977 DNAJC5Q9H3Z4 198 aa9.66□□□□□ -0.86
MRE11-202ENST00000323977 CHIC1Q5VXU3 224 aa9.54□□□□□ -0.88
MRE11-202ENST00000323977 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
MRE11-202ENST00000323977 ABCC9O60706 1549 aa9.24□□□□□ -0.93
MRE11-202ENST00000323977 NISCHQ9Y2I1 1504 aa9.24□□□□□ -0.93
MRE11-202ENST00000323977 AEBP2Q6ZN18 517 aaPredicted RBP9.06□□□□□ -0.96
MRE11-202ENST00000323977 CCDC180Q9P1Z9 1646 aa8.9□□□□□ -0.99
MRE11-202ENST00000323977 CUX2O14529 1486 aa8.8□□□□□ -1
MRE11-202ENST00000323977 RB1CC1Q8TDY2 1594 aa8.77□□□□□ -1
MRE11-202ENST00000323977 SLC24A1O60721 1099 aa8.68□□□□□ -1.02
MRE11-202ENST00000323977 SHROOM4Q9ULL8 1493 aa8.66□□□□□ -1.02
MRE11-202ENST00000323977 CECR2Q9BXF3 1484 aa8.59□□□□□ -1.03
MRE11-202ENST00000323977 NACADO15069 1562 aa8.54□□□□□ -1.04
MRE11-202ENST00000323977 CC2D2AQ9P2K1 1620 aa8.52□□□□□ -1.05
MRE11-202ENST00000323977 UNC13AQ9UPW8 1703 aa8.51□□□□□ -1.05
MRE11-202ENST00000323977 TRIM41Q8WV44 630 aa8.44□□□□□ -1.06
MRE11-202ENST00000323977 BICRAQ9NZM4 1560 aa8.44□□□□□ -1.06
MRE11-202ENST00000323977 PHF23Q9BUL5 403 aaPredicted RBP8.44□□□□□ -1.06
MRE11-202ENST00000323977 PABPN1Q86U42 306 aaKnown RBP eCLIP8.35□□□□□ -1.07
MRE11-202ENST00000323977 MYT1Q01538 1121 aa8.34□□□□□ -1.07
MRE11-202ENST00000323977 EIF4G1Q04637 1599 aaKnown RBP8.29□□□□□ -1.08
MRE11-202ENST00000323977 MYO15BQ96JP2 1530 aa8.28□□□□□ -1.08
MRE11-202ENST00000323977 ILDR1Q86SU0 546 aaPredicted RBP8.24□□□□□ -1.09
MRE11-202ENST00000323977 TTBK1Q5TCY1 1321 aaPredicted RBP8.23□□□□□ -1.09
MRE11-202ENST00000323977 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.09
MRE11-202ENST00000323977 ERCC6Q03468 1493 aa8.15□□□□□ -1.1
MRE11-202ENST00000323977 EHMT2Q96KQ7 1210 aa8.11□□□□□ -1.11
MRE11-202ENST00000323977 THOC2Q8NI27 1593 aaKnown RBP8.09□□□□□ -1.11
MRE11-202ENST00000323977 DAXXQ9UER7 740 aaPredicted RBP8.07□□□□□ -1.12
MRE11-202ENST00000323977 PLPPR3Q6T4P5 718 aa8.06□□□□□ -1.12
MRE11-202ENST00000323977 RIMBP3CA6NJZ7 1639 aa8.05□□□□□ -1.12
MRE11-202ENST00000323977 RIMBP3BA6NNM3 1639 aa8.05□□□□□ -1.12
MRE11-202ENST00000323977 RIMBP3Q9UFD9 1639 aa8.05□□□□□ -1.12
MRE11-202ENST00000323977 BAZ1AQ9NRL2 1556 aaPredicted RBP8.03□□□□□ -1.12
MRE11-202ENST00000323977 ERCC6L2Q5T890 1561 aa7.97□□□□□ -1.13
MRE11-202ENST00000323977 ERICH6Q7L0X2 663 aa7.96□□□□□ -1.14
MRE11-202ENST00000323977 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
MRE11-202ENST00000323977 SOCS7O14512 581 aa7.92□□□□□ -1.14
MRE11-202ENST00000323977 APLP2Q06481 763 aa7.92□□□□□ -1.14
MRE11-202ENST00000323977 PRKCSHP14314 528 aaPredicted RBP7.91□□□□□ -1.14
MRE11-202ENST00000323977 ARHGEF11O15085 1522 aa7.87□□□□□ -1.15
MRE11-202ENST00000323977 FBXO41Q8TF61 875 aa7.85□□□□□ -1.15
MRE11-202ENST00000323977 LMTK3Q96Q04 1460 aa7.85□□□□□ -1.15
MRE11-202ENST00000323977 LAMC3Q9Y6N6 1575 aa7.84□□□□□ -1.15
MRE11-202ENST00000323977 NCAPD3P42695 1498 aa7.8□□□□□ -1.16
MRE11-202ENST00000323977 TRHP20396 242 aaPredicted RBP7.79□□□□□ -1.16
MRE11-202ENST00000323977 WDR62O43379 1518 aa7.79□□□□□ -1.16
MRE11-202ENST00000323977 KCNA4P22459 653 aa7.77□□□□□ -1.16
MRE11-202ENST00000323977 DCAF1Q9Y4B6 1507 aa7.75□□□□□ -1.17
MRE11-202ENST00000323977 NCBP3Q53F19 620 aaKnown RBP7.74□□□□□ -1.17
MRE11-202ENST00000323977 KIF21AQ7Z4S6 1674 aa7.74□□□□□ -1.17
MRE11-202ENST00000323977 HMGXB3Q12766 1538 aa7.74□□□□□ -1.17
MRE11-202ENST00000323977 RSF1Q96T23 1441 aaPredicted RBP7.72□□□□□ -1.17
MRE11-202ENST00000323977 PDS5BQ9NTI5 1447 aa7.71□□□□□ -1.17
MRE11-202ENST00000323977 MRC2Q9UBG0 1479 aa7.71□□□□□ -1.18
MRE11-202ENST00000323977 ARAP1Q96P48 1450 aa7.7□□□□□ -1.18
MRE11-202ENST00000323977 CSRNP3Q8WYN3 585 aa7.68□□□□□ -1.18
MRE11-202ENST00000323977 SMARCA2P51531 1590 aa7.66□□□□□ -1.18
MRE11-202ENST00000323977 SCRIBQ14160 1630 aa7.66□□□□□ -1.18
MRE11-202ENST00000323977 NESP48681 1621 aa7.64□□□□□ -1.19
MRE11-202ENST00000323977 SENP3Q9H4L4 574 aaPredicted RBP7.62□□□□□ -1.19
MRE11-202ENST00000323977 RTN4Q9NQC3 1192 aaKnown RBP7.61□□□□□ -1.19
MRE11-202ENST00000323977 HECW2Q9P2P5 1572 aa7.6□□□□□ -1.19
MRE11-202ENST00000323977 CYB5RLQ6IPT4 315 aa7.58□□□□□ -1.2
MRE11-202ENST00000323977 SLC4A1APQ9BWU0 796 aaKnown RBP7.55□□□□□ -1.2
MRE11-202ENST00000323977 SPATA31D1Q6ZQQ2 1576 aa7.54□□□□□ -1.2
MRE11-202ENST00000323977 KDM4FA0A1W2PPD8 638 aa7.54□□□□□ -1.2
MRE11-202ENST00000323977 ARXQ96QS3 562 aa7.53□□□□□ -1.2
MRE11-202ENST00000323977 AMER1Q5JTC6 1135 aaPredicted RBP7.53□□□□□ -1.2
MRE11-202ENST00000323977 ILDR2Q71H61 639 aa7.53□□□□□ -1.2
MRE11-202ENST00000323977 ATAD2BQ9ULI0 1458 aa7.51□□□□□ -1.21
MRE11-202ENST00000323977 KIF13AQ9H1H9 1805 aa7.49□□□□□ -1.21
MRE11-202ENST00000323977 ADRA2BP18089 450 aa7.48□□□□□ -1.21
MRE11-202ENST00000323977 DISP3Q9P2K9 1392 aa7.48□□□□□ -1.21
MRE11-202ENST00000323977 EIF5BO60841 1220 aaKnown RBP7.47□□□□□ -1.21
MRE11-202ENST00000323977 CHD1O14646 1710 aa7.45□□□□□ -1.22
MRE11-202ENST00000323977 RANGAP1P46060 587 aaPredicted RBP7.45□□□□□ -1.22
MRE11-202ENST00000323977 PEG3Q9GZU2 1588 aa7.44□□□□□ -1.22
MRE11-202ENST00000323977 SYNJ2O15056 1496 aa7.44□□□□□ -1.22
MRE11-202ENST00000323977 CLASP1Q7Z460 1538 aa7.43□□□□□ -1.22
MRE11-202ENST00000323977 DCAF8L2P0C7V8 631 aa7.43□□□□□ -1.22
MRE11-202ENST00000323977 CEP164Q9UPV0 1460 aa7.42□□□□□ -1.22
MRE11-202ENST00000323977 IFT140Q96RY7 1462 aa7.4□□□□□ -1.22
MRE11-202ENST00000323977 CADPSQ9ULU8 1353 aa7.39□□□□□ -1.23
MRE11-202ENST00000323977 KDM6BO15054 1643 aa7.39□□□□□ -1.23
MRE11-202ENST00000323977 TOP2BQ02880 1626 aa7.39□□□□□ -1.23
MRE11-202ENST00000323977 ADGRL1O94910 1474 aa7.37□□□□□ -1.23
MRE11-202ENST00000323977 WDR97A6NE52 1622 aa7.36□□□□□ -1.23
MRE11-202ENST00000323977 BAZ1BQ9UIG0 1483 aaKnown RBP7.36□□□□□ -1.23
MRE11-202ENST00000323977 TIMELESSQ9UNS1 1208 aa7.35□□□□□ -1.23
MRE11-202ENST00000323977 ZCCHC6Q5VYS8 1495 aaKnown RBP7.34□□□□□ -1.23
MRE11-202ENST00000323977 SYNJ1O43426 1573 aa7.34□□□□□ -1.23
MRE11-202ENST00000323977 SMARCA4P51532 1647 aa7.34□□□□□ -1.23
MRE11-202ENST00000323977 EIF4G3O43432 1585 aaKnown RBP7.3□□□□□ -1.24
MRE11-202ENST00000323977 BCL11AQ9H165 835 aa7.28□□□□□ -1.24
MRE11-202ENST00000323977 GAPVD1Q14C86 1478 aa7.28□□□□□ -1.24
MRE11-202ENST00000323977 PRDM2Q13029 1718 aa7.28□□□□□ -1.24
MRE11-202ENST00000323977 ABCC10Q5T3U5 1492 aa7.27□□□□□ -1.25
MRE11-202ENST00000323977 HOMEZQ8IX15 550 aa7.27□□□□□ -1.25
MRE11-202ENST00000323977 FANCD2Q9BXW9 1451 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms