RNA–Protein interactions for RNA: ENST00000590041.5

GPATCH8-207, Transcript of G-patch domain containing 8, humanhuman

TSL 5

Gene GPATCH8, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-207ENST00000590041 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
GPATCH8-207ENST00000590041 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
GPATCH8-207ENST00000590041 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
GPATCH8-207ENST00000590041 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
GPATCH8-207ENST00000590041 FOXD1Q16676 465 aa21.91■■□□□ 1.1
GPATCH8-207ENST00000590041 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
GPATCH8-207ENST00000590041 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.96
GPATCH8-207ENST00000590041 ADRA2BP18089 450 aa20.95■□□□□ 0.94
GPATCH8-207ENST00000590041 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.89
GPATCH8-207ENST00000590041 MSH5O43196 834 aa20.17■□□□□ 0.82
GPATCH8-207ENST00000590041 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
GPATCH8-207ENST00000590041 MAPK8IP2Q13387 824 aaPredicted RBP19.06■□□□□ 0.64
GPATCH8-207ENST00000590041 SCAF1Q9H7N4 1312 aaKnown RBP19.05■□□□□ 0.64
GPATCH8-207ENST00000590041 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
GPATCH8-207ENST00000590041 KCNA4P22459 653 aa18.73■□□□□ 0.59
GPATCH8-207ENST00000590041 CNKSR2Q8WXI2 1034 aa18.72■□□□□ 0.59
GPATCH8-207ENST00000590041 NCBP3Q53F19 620 aaKnown RBP18.63■□□□□ 0.57
GPATCH8-207ENST00000590041 POTEDQ86YR6 584 aa18.62■□□□□ 0.57
GPATCH8-207ENST00000590041 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
GPATCH8-207ENST00000590041 HOXD11P31277 338 aaPredicted RBP18.39■□□□□ 0.53
GPATCH8-207ENST00000590041 RNF216Q9NWF9 866 aaPredicted RBP18.39■□□□□ 0.53
GPATCH8-207ENST00000590041 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
GPATCH8-207ENST00000590041 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
GPATCH8-207ENST00000590041 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
GPATCH8-207ENST00000590041 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
GPATCH8-207ENST00000590041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.389e-7■■■□□ 15.6
GPATCH8-207ENST00000590041 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
GPATCH8-207ENST00000590041 ZBTB22O15209 634 aa17.29■□□□□ 0.36
GPATCH8-207ENST00000590041 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
GPATCH8-207ENST00000590041 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
GPATCH8-207ENST00000590041 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
GPATCH8-207ENST00000590041 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
GPATCH8-207ENST00000590041 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
GPATCH8-207ENST00000590041 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
GPATCH8-207ENST00000590041 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
GPATCH8-207ENST00000590041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
GPATCH8-207ENST00000590041 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
GPATCH8-207ENST00000590041 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
GPATCH8-207ENST00000590041 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
GPATCH8-207ENST00000590041 APLP2Q06481 763 aa16.67■□□□□ 0.26
GPATCH8-207ENST00000590041 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
GPATCH8-207ENST00000590041 CAPN15O75808 1086 aa16.62■□□□□ 0.25
GPATCH8-207ENST00000590041 ATXN8OSP0DMR3 200 aa16.62■□□□□ 0.25
GPATCH8-207ENST00000590041 TRHP20396 242 aaPredicted RBP16.53■□□□□ 0.24
GPATCH8-207ENST00000590041 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
GPATCH8-207ENST00000590041 DSG3P32926 999 aa16.45■□□□□ 0.22
GPATCH8-207ENST00000590041 ABCB7O75027 752 aa16.35■□□□□ 0.21
GPATCH8-207ENST00000590041 POLA2Q14181 598 aa16.26■□□□□ 0.19
GPATCH8-207ENST00000590041 MKRN4PQ13434 485 aaPredicted RBP15.94■□□□□ 0.14
GPATCH8-207ENST00000590041 ZBTB12Q9Y330 459 aaPredicted RBP15.94■□□□□ 0.14
GPATCH8-207ENST00000590041 FBLN2P98095 1184 aa15.83■□□□□ 0.12
GPATCH8-207ENST00000590041 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
GPATCH8-207ENST00000590041 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
GPATCH8-207ENST00000590041 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
GPATCH8-207ENST00000590041 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
GPATCH8-207ENST00000590041 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
GPATCH8-207ENST00000590041 SSUH2Q9Y2M2 353 aa15.48■□□□□ 0.07
GPATCH8-207ENST00000590041 SPDYE4A6NLX3 237 aa15.43■□□□□ 0.06
GPATCH8-207ENST00000590041 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
GPATCH8-207ENST00000590041 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
GPATCH8-207ENST00000590041 FKBP8Q14318 412 aa15.35■□□□□ 0.05
GPATCH8-207ENST00000590041 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
GPATCH8-207ENST00000590041 PROM2Q8N271 834 aa15.27■□□□□ 0.04
GPATCH8-207ENST00000590041 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
GPATCH8-207ENST00000590041 PITPNM1O00562 1244 aa15.14■□□□□ 0.01
GPATCH8-207ENST00000590041 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
GPATCH8-207ENST00000590041 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
GPATCH8-207ENST00000590041 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
GPATCH8-207ENST00000590041 STAG3Q9UJ98 1225 aa14.93□□□□□ -0.02
GPATCH8-207ENST00000590041 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
GPATCH8-207ENST00000590041 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
GPATCH8-207ENST00000590041 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
GPATCH8-207ENST00000590041 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
GPATCH8-207ENST00000590041 CREBZFQ9NS37 354 aa14.74□□□□□ -0.05
GPATCH8-207ENST00000590041 PRKAR2AP13861 404 aaKnown RBP14.72□□□□□ -0.05
GPATCH8-207ENST00000590041 CHADLQ6NUI6 762 aa14.72□□□□□ -0.05
GPATCH8-207ENST00000590041 POTEHQ6S545 545 aa14.69□□□□□ -0.06
GPATCH8-207ENST00000590041 VASPP50552 380 aaPredicted RBP14.66□□□□□ -0.06
GPATCH8-207ENST00000590041 MNX1P50219 401 aaPredicted RBP14.61□□□□□ -0.07
GPATCH8-207ENST00000590041 MIER1Q8N108 512 aa14.58□□□□□ -0.08
GPATCH8-207ENST00000590041 PLCD3Q8N3E9 789 aa14.56□□□□□ -0.08
GPATCH8-207ENST00000590041 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
GPATCH8-207ENST00000590041 IFNLR1Q8IU57 520 aaPredicted RBP14.47□□□□□ -0.09
GPATCH8-207ENST00000590041 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
GPATCH8-207ENST00000590041 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
GPATCH8-207ENST00000590041 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
GPATCH8-207ENST00000590041 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
GPATCH8-207ENST00000590041 NUBP1P53384 320 aa14.34□□□□□ -0.11
GPATCH8-207ENST00000590041 KLHL34Q8N239 644 aa14.33□□□□□ -0.12
GPATCH8-207ENST00000590041 HAX1O00165 279 aa14.32□□□□□ -0.12
GPATCH8-207ENST00000590041 EVX2Q03828 476 aa14.31□□□□□ -0.12
GPATCH8-207ENST00000590041 RASEFQ8IZ41 740 aa14.3□□□□□ -0.12
GPATCH8-207ENST00000590041 CD44P16070 742 aaKnown RBP14.29□□□□□ -0.12
GPATCH8-207ENST00000590041 SPOCK2Q92563 424 aa14.26□□□□□ -0.13
GPATCH8-207ENST00000590041 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
GPATCH8-207ENST00000590041 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
GPATCH8-207ENST00000590041 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
GPATCH8-207ENST00000590041 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
GPATCH8-207ENST00000590041 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
GPATCH8-207ENST00000590041 FAM212AQ96EL1 285 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms