RNA–Protein interactions for RNA: ENST00000225719.8

CPD-201, Transcript of carboxypeptidase D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPD, Length 9,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-201ENST00000225719 PELP1Q8IZL8 1130 aaKnown RBP25.8■■□□□ 1.72
CPD-201ENST00000225719 MYT1Q01538 1121 aa25.44■■□□□ 1.66
CPD-201ENST00000225719 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
CPD-201ENST00000225719 CCER1Q8TC90 406 aaPredicted RBP24.45■■□□□ 1.5
CPD-201ENST00000225719 ERICH6Q7L0X2 663 aa24.26■■□□□ 1.47
CPD-201ENST00000225719 CENPBP07199 599 aaPredicted RBP24.18■■□□□ 1.46
CPD-201ENST00000225719 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
CPD-201ENST00000225719 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
CPD-201ENST00000225719 YTHDC1Q96MU7 727 aaKnown RBP23.78■■□□□ 1.4
CPD-201ENST00000225719 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
CPD-201ENST00000225719 APLP2Q06481 763 aa23.71■■□□□ 1.39
CPD-201ENST00000225719 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.37
CPD-201ENST00000225719 NEFLP07196 543 aa23.47■■□□□ 1.35
CPD-201ENST00000225719 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
CPD-201ENST00000225719 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
CPD-201ENST00000225719 PCGF6Q9BYE7 350 aa23.17■■□□□ 1.3
CPD-201ENST00000225719 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
CPD-201ENST00000225719 DAXXQ9UER7 740 aaPredicted RBP23.02■■□□□ 1.28
CPD-201ENST00000225719 RTL5Q5HYW3 569 aaPredicted RBP22.76■■□□□ 1.23
CPD-201ENST00000225719 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
CPD-201ENST00000225719 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
CPD-201ENST00000225719 HRCP23327 699 aa22.42■■□□□ 1.18
CPD-201ENST00000225719 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
CPD-201ENST00000225719 GLIPR1L2Q4G1C9 344 aa22.33■■□□□ 1.16
CPD-201ENST00000225719 UBTFP17480 764 aaKnown RBP22.31■■□□□ 1.16
CPD-201ENST00000225719 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
CPD-201ENST00000225719 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
CPD-201ENST00000225719 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
CPD-201ENST00000225719 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
CPD-201ENST00000225719 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
CPD-201ENST00000225719 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
CPD-201ENST00000225719 ANP32AP39687 249 aaKnown RBP21.7■■□□□ 1.07
CPD-201ENST00000225719 ANP32BQ92688 251 aaKnown RBP21.7■■□□□ 1.06
CPD-201ENST00000225719 GTF3C3Q9Y5Q9 886 aa21.68■■□□□ 1.06
CPD-201ENST00000225719 POLR3GLQ9BT43 218 aa21.65■■□□□ 1.06
CPD-201ENST00000225719 EIF5BO60841 1220 aaKnown RBP21.62■■□□□ 1.05
CPD-201ENST00000225719 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
CPD-201ENST00000225719 ITGAEP38570 1179 aa21.48■■□□□ 1.03
CPD-201ENST00000225719 ZBTB47Q9UFB7 747 aaPredicted RBP21.43■■□□□ 1.02
CPD-201ENST00000225719 ACIN1Q9UKV3 1341 aaKnown RBP21.43■■□□□ 1.02
CPD-201ENST00000225719 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
CPD-201ENST00000225719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.38■■□□□ 1.01
CPD-201ENST00000225719 SLC4A1APQ9BWU0 796 aaKnown RBP21.37■■□□□ 1.01
CPD-201ENST00000225719 ANP32CO43423 234 aa21.35■■□□□ 1.01
CPD-201ENST00000225719 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
CPD-201ENST00000225719 BCANQ96GW7 911 aa21.2■□□□□ 0.98
CPD-201ENST00000225719 CNGB1Q14028 1251 aaPredicted RBP21.2■□□□□ 0.98
CPD-201ENST00000225719 UPF2Q9HAU5 1272 aaKnown RBP21.19■□□□□ 0.98
CPD-201ENST00000225719 LOC105371045A0A1W2PR82 267 aa21.15■□□□□ 0.98
CPD-201ENST00000225719 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
CPD-201ENST00000225719 ANP32EQ9BTT0 268 aa21.12■□□□□ 0.97
CPD-201ENST00000225719 CANXP27824 592 aaKnown RBP21.09■□□□□ 0.97
CPD-201ENST00000225719 HSP90AA1P07900 732 aaKnown RBP21.08■□□□□ 0.96
CPD-201ENST00000225719 FAM50AQ14320 339 aaKnown RBP21.06■□□□□ 0.96
CPD-201ENST00000225719 NEFMP07197 916 aa21.05■□□□□ 0.96
CPD-201ENST00000225719 TRIM44Q96DX7 344 aaPredicted RBP21.02■□□□□ 0.96
CPD-201ENST00000225719 TRIM52Q96A61 297 aa20.98■□□□□ 0.95
CPD-201ENST00000225719 NCLP19338 710 aaKnown RBP20.96■□□□□ 0.95
CPD-201ENST00000225719 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
CPD-201ENST00000225719 ERICH6BQ5W0A0 696 aa20.89■□□□□ 0.93
CPD-201ENST00000225719 NPM2Q86SE8 214 aaKnown RBP20.88■□□□□ 0.93
CPD-201ENST00000225719 CDK11BP21127 795 aaKnown RBP20.85■□□□□ 0.93
CPD-201ENST00000225719 DDRGK1Q96HY6 314 aa20.84■□□□□ 0.93
CPD-201ENST00000225719 NBR1Q14596 966 aa20.81■□□□□ 0.92
CPD-201ENST00000225719 FKBP8Q14318 412 aa20.78■□□□□ 0.92
CPD-201ENST00000225719 BECN1Q14457 450 aa20.75■□□□□ 0.91
CPD-201ENST00000225719 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
CPD-201ENST00000225719 SLC24A1O60721 1099 aa20.68■□□□□ 0.9
CPD-201ENST00000225719 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
CPD-201ENST00000225719 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.67■□□□□ 0.9
CPD-201ENST00000225719 GOLGA6L22H0YM25 854 aa20.67■□□□□ 0.9
CPD-201ENST00000225719 CCDC136Q96JN2 1154 aa20.64■□□□□ 0.9
CPD-201ENST00000225719 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
CPD-201ENST00000225719 PPM1GO15355 546 aaPredicted RBP20.58■□□□□ 0.88
CPD-201ENST00000225719 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
CPD-201ENST00000225719 TONSLQ96HA7 1378 aa20.53■□□□□ 0.88
CPD-201ENST00000225719 BCL11AQ9H165 835 aa20.52■□□□□ 0.88
CPD-201ENST00000225719 NAP1L5Q96NT1 182 aaPredicted RBP20.5■□□□□ 0.87
CPD-201ENST00000225719 HNRNPUQ00839 825 aaKnown RBP eCLIP20.48■□□□□ 0.87
CPD-201ENST00000225719 CHAF1AQ13111 956 aaPredicted RBP20.43■□□□□ 0.86
CPD-201ENST00000225719 DNTTIP2Q5QJE6 756 aaKnown RBP20.42■□□□□ 0.86
CPD-201ENST00000225719 PTMAP06454 111 aaKnown RBP20.41■□□□□ 0.86
CPD-201ENST00000225719 GOLGA6L6A8MZA4 724 aa20.39■□□□□ 0.86
CPD-201ENST00000225719 ARXQ96QS3 562 aa20.39■□□□□ 0.85
CPD-201ENST00000225719 MYH16Q9H6N6 1097 aa20.37■□□□□ 0.85
CPD-201ENST00000225719 TMC1Q8TDI8 760 aa20.36■□□□□ 0.85
CPD-201ENST00000225719 L1TD1Q5T7N2 865 aaKnown RBP20.35■□□□□ 0.85
CPD-201ENST00000225719 NRDCO43847 1150 aa20.33■□□□□ 0.85
CPD-201ENST00000225719 ZRSR1Q15695 479 aaKnown RBP20.33■□□□□ 0.84
CPD-201ENST00000225719 NOP58Q9Y2X3 529 aaKnown RBP20.3■□□□□ 0.84
CPD-201ENST00000225719 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
CPD-201ENST00000225719 FAM9BQ8IZU0 186 aa20.26■□□□□ 0.83
CPD-201ENST00000225719 CASC1Q6TDU7 716 aa20.23■□□□□ 0.83
CPD-201ENST00000225719 MSNP26038 577 aaKnown RBP20.23■□□□□ 0.83
CPD-201ENST00000225719 PTMSP20962 102 aa20.2■□□□□ 0.82
CPD-201ENST00000225719 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
CPD-201ENST00000225719 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
CPD-201ENST00000225719 ESF1Q9H501 851 aaKnown RBP20.14■□□□□ 0.81
CPD-201ENST00000225719 ARID4BQ4LE39 1312 aaPredicted RBP20.12■□□□□ 0.81
CPD-201ENST00000225719 MRS2Q9HD23 443 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms