RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
SDHAF3-204ENST00000489852 ABCC9O60706 1549 aa35.98■■■■□ 3.35
SDHAF3-204ENST00000489852 DNAJC5BQ9UF47 199 aa34.87■■■■□ 3.17
SDHAF3-204ENST00000489852 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
SDHAF3-204ENST00000489852 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
SDHAF3-204ENST00000489852 PABPN1Q86U42 306 aaKnown RBP eCLIP33.34■■■□□ 2.93
SDHAF3-204ENST00000489852 NACADO15069 1562 aa33.14■■■□□ 2.9
SDHAF3-204ENST00000489852 DNAJC5Q9H3Z4 198 aa32.95■■■□□ 2.87
SDHAF3-204ENST00000489852 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
SDHAF3-204ENST00000489852 DCAF8L2P0C7V8 631 aa32.83■■■□□ 2.85
SDHAF3-204ENST00000489852 BICRAQ9NZM4 1560 aa32.73■■■□□ 2.83
SDHAF3-204ENST00000489852 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
SDHAF3-204ENST00000489852 CC2D2AQ9P2K1 1620 aa32.42■■■□□ 2.78
SDHAF3-204ENST00000489852 MYO15BQ96JP2 1530 aa32.25■■■□□ 2.75
SDHAF3-204ENST00000489852 SHROOM4Q9ULL8 1493 aa32.15■■■□□ 2.74
SDHAF3-204ENST00000489852 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
SDHAF3-204ENST00000489852 SCRIBQ14160 1630 aa31.59■■■□□ 2.65
SDHAF3-204ENST00000489852 CUX2O14529 1486 aa31.51■■■□□ 2.63
SDHAF3-204ENST00000489852 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
SDHAF3-204ENST00000489852 ZCCHC6Q5VYS8 1495 aaKnown RBP31.31■■■□□ 2.6
SDHAF3-204ENST00000489852 ERCC6Q03468 1493 aa31.17■■■□□ 2.58
SDHAF3-204ENST00000489852 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
SDHAF3-204ENST00000489852 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
SDHAF3-204ENST00000489852 NESP48681 1621 aa30.55■■■□□ 2.48
SDHAF3-204ENST00000489852 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.46
SDHAF3-204ENST00000489852 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
SDHAF3-204ENST00000489852 HMGXB3Q12766 1538 aa30.26■■■□□ 2.43
SDHAF3-204ENST00000489852 SMARCA2P51531 1590 aa30.22■■■□□ 2.43
SDHAF3-204ENST00000489852 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
SDHAF3-204ENST00000489852 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
SDHAF3-204ENST00000489852 PDS5BQ9NTI5 1447 aa30.03■■■□□ 2.4
SDHAF3-204ENST00000489852 BAZ1BQ9UIG0 1483 aaKnown RBP30.01■■■□□ 2.4
SDHAF3-204ENST00000489852 SMARCA4P51532 1647 aa30■■■□□ 2.39
SDHAF3-204ENST00000489852 BAZ1AQ9NRL2 1556 aaPredicted RBP29.93■■■□□ 2.38
SDHAF3-204ENST00000489852 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
SDHAF3-204ENST00000489852 MRC2Q9UBG0 1479 aa29.82■■■□□ 2.36
SDHAF3-204ENST00000489852 WDR62O43379 1518 aa29.77■■■□□ 2.36
SDHAF3-204ENST00000489852 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
SDHAF3-204ENST00000489852 CADPSQ9ULU8 1353 aa29.65■■■□□ 2.34
SDHAF3-204ENST00000489852 RIMBP3CA6NJZ7 1639 aa29.6■■■□□ 2.33
SDHAF3-204ENST00000489852 RIMBP3BA6NNM3 1639 aa29.6■■■□□ 2.33
SDHAF3-204ENST00000489852 RIMBP3Q9UFD9 1639 aa29.6■■■□□ 2.33
SDHAF3-204ENST00000489852 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
SDHAF3-204ENST00000489852 CEP164Q9UPV0 1460 aa29.46■■■□□ 2.31
SDHAF3-204ENST00000489852 TRHP20396 242 aaPredicted RBP29.42■■■□□ 2.3
SDHAF3-204ENST00000489852 ARHGEF11O15085 1522 aa29.39■■■□□ 2.3
SDHAF3-204ENST00000489852 MROH2BQ7Z745 1585 aa29.36■■■□□ 2.29
SDHAF3-204ENST00000489852 CYB5RLQ6IPT4 315 aa29.32■■■□□ 2.28
SDHAF3-204ENST00000489852 FANCD2Q9BXW9 1451 aa29.31■■■□□ 2.28
SDHAF3-204ENST00000489852 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.25
SDHAF3-204ENST00000489852 CFTRP13569 1480 aa29.04■■■□□ 2.24
SDHAF3-204ENST00000489852 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
SDHAF3-204ENST00000489852 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
SDHAF3-204ENST00000489852 WIZO95785 1651 aa28.95■■■□□ 2.22
SDHAF3-204ENST00000489852 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
SDHAF3-204ENST00000489852 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
SDHAF3-204ENST00000489852 CHD1O14646 1710 aa28.77■■■□□ 2.2
SDHAF3-204ENST00000489852 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
SDHAF3-204ENST00000489852 FBLN2P98095 1184 aa28.71■■■□□ 2.19
SDHAF3-204ENST00000489852 TOPBP1Q92547 1522 aa28.61■■■□□ 2.17
SDHAF3-204ENST00000489852 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
SDHAF3-204ENST00000489852 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.17
SDHAF3-204ENST00000489852 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
SDHAF3-204ENST00000489852 ABCC8Q09428 1581 aa28.48■■■□□ 2.15
SDHAF3-204ENST00000489852 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
SDHAF3-204ENST00000489852 CLASP1Q7Z460 1538 aa28.4■■■□□ 2.14
SDHAF3-204ENST00000489852 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
SDHAF3-204ENST00000489852 ILDR1Q86SU0 546 aaPredicted RBP28.37■■■□□ 2.13
SDHAF3-204ENST00000489852 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
SDHAF3-204ENST00000489852 CHMP7Q8WUX9 453 aaPredicted RBP28.28■■■□□ 2.12
SDHAF3-204ENST00000489852 SNAPC4Q5SXM2 1469 aa28.25■■■□□ 2.11
SDHAF3-204ENST00000489852 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
SDHAF3-204ENST00000489852 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
SDHAF3-204ENST00000489852 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
SDHAF3-204ENST00000489852 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
SDHAF3-204ENST00000489852 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
SDHAF3-204ENST00000489852 SOGA1O94964 1423 aa28.11■■■□□ 2.09
SDHAF3-204ENST00000489852 MAGI1Q96QZ7 1491 aaPredicted RBP28.11■■■□□ 2.09
SDHAF3-204ENST00000489852 SYNJ2O15056 1496 aa28.05■■■□□ 2.08
SDHAF3-204ENST00000489852 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
SDHAF3-204ENST00000489852 GRIN2BQ13224 1484 aa28■■■□□ 2.07
SDHAF3-204ENST00000489852 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
SDHAF3-204ENST00000489852 KIF13AQ9H1H9 1805 aa27.92■■■□□ 2.06
SDHAF3-204ENST00000489852 ERCC6L2Q5T890 1561 aa27.89■■■□□ 2.05
SDHAF3-204ENST00000489852 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.05
SDHAF3-204ENST00000489852 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
SDHAF3-204ENST00000489852 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
SDHAF3-204ENST00000489852 FAM69CQ0P6D2 419 aa27.72■■■□□ 2.03
SDHAF3-204ENST00000489852 CUX1P39880 1505 aa27.66■■■□□ 2.02
SDHAF3-204ENST00000489852 GRIN2AQ12879 1464 aa27.63■■■□□ 2.01
SDHAF3-204ENST00000489852 ABCC10Q5T3U5 1492 aa27.63■■■□□ 2.01
SDHAF3-204ENST00000489852 KDM6BO15054 1643 aa27.61■■■□□ 2.01
SDHAF3-204ENST00000489852 NUP160Q12769 1436 aa27.58■■■□□ 2
SDHAF3-204ENST00000489852 SHROOM2Q13796 1616 aa27.57■■■□□ 2
SDHAF3-204ENST00000489852 ABCA5Q8WWZ7 1642 aa27.54■■■□□ 2
SDHAF3-204ENST00000489852 NPM1P06748 294 aaKnown RBP eCLIP27.52■■■□□ 2
SDHAF3-204ENST00000489852 DIP2BQ9P265 1576 aa27.5■■□□□ 1.99
SDHAF3-204ENST00000489852 ABCA10Q8WWZ4 1543 aa27.49■■□□□ 1.99
SDHAF3-204ENST00000489852 MAPKBP1O60336 1514 aa27.46■■□□□ 1.99
SDHAF3-204ENST00000489852 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms