RNA–Protein interactions for RNA: ENST00000486656.5

MED15-227, Transcript of mediator complex subunit 15, humanhuman

TSL 4

Gene MED15, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED15-227ENST00000486656 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
MED15-227ENST00000486656 CCDC180Q9P1Z9 1646 aa40.67■■■■■ 4.1
MED15-227ENST00000486656 ABCC9O60706 1549 aa39.96■■■■□ 3.99
MED15-227ENST00000486656 RB1CC1Q8TDY2 1594 aa38.32■■■■□ 3.73
MED15-227ENST00000486656 DCAF8L2P0C7V8 631 aa38.26■■■■□ 3.72
MED15-227ENST00000486656 NACADO15069 1562 aa38.21■■■■□ 3.71
MED15-227ENST00000486656 ZCCHC6Q5VYS8 1495 aaKnown RBP37.97■■■■□ 3.67
MED15-227ENST00000486656 MYO15BQ96JP2 1530 aa37.85■■■■□ 3.65
MED15-227ENST00000486656 DCAF1Q9Y4B6 1507 aa37.66■■■■□ 3.62
MED15-227ENST00000486656 UNC13AQ9UPW8 1703 aa37.6■■■■□ 3.61
MED15-227ENST00000486656 PABPN1Q86U42 306 aaKnown RBP eCLIP37.3■■■■□ 3.56
MED15-227ENST00000486656 BICRAQ9NZM4 1560 aa37.18■■■■□ 3.54
MED15-227ENST00000486656 SCRIBQ14160 1630 aa37.18■■■■□ 3.54
MED15-227ENST00000486656 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
MED15-227ENST00000486656 SHROOM4Q9ULL8 1493 aa36.66■■■■□ 3.46
MED15-227ENST00000486656 EIF4G1Q04637 1599 aaKnown RBP36.21■■■■□ 3.39
MED15-227ENST00000486656 CC2D2AQ9P2K1 1620 aa36.13■■■■□ 3.37
MED15-227ENST00000486656 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
MED15-227ENST00000486656 SMARCA4P51532 1647 aa35.48■■■■□ 3.27
MED15-227ENST00000486656 BAZ1AQ9NRL2 1556 aaPredicted RBP35.38■■■■□ 3.25
MED15-227ENST00000486656 ATAD2BQ9ULI0 1458 aa35.26■■■■□ 3.23
MED15-227ENST00000486656 SMARCA2P51531 1590 aa35.22■■■■□ 3.23
MED15-227ENST00000486656 NCAPD3P42695 1498 aa35.22■■■■□ 3.23
MED15-227ENST00000486656 MROH2BQ7Z745 1585 aa35.2■■■■□ 3.23
MED15-227ENST00000486656 HMGXB3Q12766 1538 aa35.08■■■■□ 3.21
MED15-227ENST00000486656 PEG3Q9GZU2 1588 aa35.05■■■■□ 3.2
MED15-227ENST00000486656 BAZ1BQ9UIG0 1483 aaKnown RBP35■■■■□ 3.19
MED15-227ENST00000486656 WIZO95785 1651 aa34.88■■■■□ 3.17
MED15-227ENST00000486656 RSF1Q96T23 1441 aaPredicted RBP34.7■■■■□ 3.15
MED15-227ENST00000486656 NESP48681 1621 aa34.54■■■■□ 3.12
MED15-227ENST00000486656 ERCC6Q03468 1493 aa34.44■■■■□ 3.1
MED15-227ENST00000486656 TOP2AP11388 1531 aaKnown RBP34.43■■■■□ 3.1
MED15-227ENST00000486656 LAMC3Q9Y6N6 1575 aa34.37■■■■□ 3.09
MED15-227ENST00000486656 CADPSQ9ULU8 1353 aa34.2■■■■□ 3.07
MED15-227ENST00000486656 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
MED15-227ENST00000486656 DNAJC5Q9H3Z4 198 aa34.13■■■■□ 3.05
MED15-227ENST00000486656 PDS5BQ9NTI5 1447 aa34.11■■■■□ 3.05
MED15-227ENST00000486656 CUX2O14529 1486 aa34.05■■■■□ 3.04
MED15-227ENST00000486656 THOC2Q8NI27 1593 aaKnown RBP34.04■■■■□ 3.04
MED15-227ENST00000486656 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.03
MED15-227ENST00000486656 CFTRP13569 1480 aa33.97■■■■□ 3.03
MED15-227ENST00000486656 PRDM2Q13029 1718 aa33.87■■■■□ 3.01
MED15-227ENST00000486656 FANCD2Q9BXW9 1451 aa33.87■■■■□ 3.01
MED15-227ENST00000486656 CEP164Q9UPV0 1460 aa33.84■■■■□ 3.01
MED15-227ENST00000486656 MRC2Q9UBG0 1479 aa33.82■■■■□ 3
MED15-227ENST00000486656 SUPT5HO00267 1087 aaKnown RBP33.81■■■■□ 3
MED15-227ENST00000486656 WDR62O43379 1518 aa33.7■■■□□ 2.99
MED15-227ENST00000486656 URB2Q14146 1524 aaKnown RBP33.55■■■□□ 2.96
MED15-227ENST00000486656 TOPBP1Q92547 1522 aa33.32■■■□□ 2.92
MED15-227ENST00000486656 DNMBPQ6XZF7 1577 aa33.27■■■□□ 2.92
MED15-227ENST00000486656 ABCC8Q09428 1581 aa33.23■■■□□ 2.91
MED15-227ENST00000486656 IFT140Q96RY7 1462 aa33.11■■■□□ 2.89
MED15-227ENST00000486656 CUX1P39880 1505 aa33.03■■■□□ 2.88
MED15-227ENST00000486656 ZNF608Q9ULD9 1512 aaPredicted RBP33.02■■■□□ 2.88
MED15-227ENST00000486656 POLA1P09884 1462 aaPredicted RBP33.02■■■□□ 2.88
MED15-227ENST00000486656 TARBP1Q13395 1621 aaKnown RBP32.97■■■□□ 2.87
MED15-227ENST00000486656 FGD5Q6ZNL6 1462 aa32.94■■■□□ 2.86
MED15-227ENST00000486656 EIF4G3O43432 1585 aaKnown RBP32.92■■■□□ 2.86
MED15-227ENST00000486656 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
MED15-227ENST00000486656 SOGA1O94964 1423 aa32.86■■■□□ 2.85
MED15-227ENST00000486656 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.841e-8■■■■■ 28.3
MED15-227ENST00000486656 WRNQ14191 1432 aaPredicted RBP eCLIP32.74■■■□□ 2.83
MED15-227ENST00000486656 SYNJ1O43426 1573 aa32.73■■■□□ 2.83
MED15-227ENST00000486656 BIVM-ERCC5R4GMW8 1640 aa32.73■■■□□ 2.83
MED15-227ENST00000486656 TDRD9Q8NDG6 1382 aaKnown RBP32.72■■■□□ 2.83
MED15-227ENST00000486656 WDR97A6NE52 1622 aa32.72■■■□□ 2.83
MED15-227ENST00000486656 TOP2BQ02880 1626 aa32.7■■■□□ 2.83
MED15-227ENST00000486656 CHD1O14646 1710 aa32.6■■■□□ 2.81
MED15-227ENST00000486656 OSCARQ8IYS5 282 aa32.6■■■□□ 2.81
MED15-227ENST00000486656 ABCA10Q8WWZ4 1543 aa32.56■■■□□ 2.8
MED15-227ENST00000486656 PBRM1Q86U86 1689 aa32.55■■■□□ 2.8
MED15-227ENST00000486656 SNAPC4Q5SXM2 1469 aa32.52■■■□□ 2.8
MED15-227ENST00000486656 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.79
MED15-227ENST00000486656 GRIN2BQ13224 1484 aa32.49■■■□□ 2.79
MED15-227ENST00000486656 GAPVD1Q14C86 1478 aa32.49■■■□□ 2.79
MED15-227ENST00000486656 FBLN2P98095 1184 aa32.48■■■□□ 2.79
MED15-227ENST00000486656 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
MED15-227ENST00000486656 TRIM41Q8WV44 630 aa32.38■■■□□ 2.77
MED15-227ENST00000486656 CHMP7Q8WUX9 453 aaPredicted RBP32.31■■■□□ 2.76
MED15-227ENST00000486656 SYNJ2O15056 1496 aa32.29■■■□□ 2.76
MED15-227ENST00000486656 ADAMTS12P58397 1594 aa32.22■■■□□ 2.75
MED15-227ENST00000486656 RIMBP3CA6NJZ7 1639 aa32.21■■■□□ 2.75
MED15-227ENST00000486656 RIMBP3BA6NNM3 1639 aa32.21■■■□□ 2.75
MED15-227ENST00000486656 RIMBP3Q9UFD9 1639 aa32.21■■■□□ 2.75
MED15-227ENST00000486656 ERICH3Q5RHP9 1530 aa32.17■■■□□ 2.74
MED15-227ENST00000486656 ARHGEF11O15085 1522 aa32.14■■■□□ 2.74
MED15-227ENST00000486656 CLASP1Q7Z460 1538 aa32.13■■■□□ 2.73
MED15-227ENST00000486656 GRIN2AQ12879 1464 aa32.1■■■□□ 2.73
MED15-227ENST00000486656 FHAD1B1AJZ9 1412 aa32.09■■■□□ 2.73
MED15-227ENST00000486656 KIF27Q86VH2 1401 aa32.05■■■□□ 2.72
MED15-227ENST00000486656 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
MED15-227ENST00000486656 CUL7Q14999 1698 aa31.92■■■□□ 2.7
MED15-227ENST00000486656 NUP160Q12769 1436 aa31.92■■■□□ 2.7
MED15-227ENST00000486656 IGF1RP08069 1367 aa31.91■■■□□ 2.7
MED15-227ENST00000486656 ARAP1Q96P48 1450 aa31.88■■■□□ 2.69
MED15-227ENST00000486656 CYB5RLQ6IPT4 315 aa31.84■■■□□ 2.69
MED15-227ENST00000486656 RUSC2Q8N2Y8 1516 aa31.79■■■□□ 2.68
MED15-227ENST00000486656 SHROOM2Q13796 1616 aa31.75■■■□□ 2.67
MED15-227ENST00000486656 CARMIL1Q5VZK9 1371 aa31.74■■■□□ 2.67
MED15-227ENST00000486656 ERCC6L2Q5T890 1561 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms