RNA–Protein interactions for RNA: ENST00000360382.4

SDHAF3-201, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 2 BASIC

Gene SDHAF3, Length 731 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-201ENST00000360382 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
SDHAF3-201ENST00000360382 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
SDHAF3-201ENST00000360382 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
SDHAF3-201ENST00000360382 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
SDHAF3-201ENST00000360382 FOXD1Q16676 465 aa21.2■□□□□ 0.98
SDHAF3-201ENST00000360382 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
SDHAF3-201ENST00000360382 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
SDHAF3-201ENST00000360382 MSH5O43196 834 aa20.11■□□□□ 0.81
SDHAF3-201ENST00000360382 ADRA2BP18089 450 aa20.08■□□□□ 0.81
SDHAF3-201ENST00000360382 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
SDHAF3-201ENST00000360382 PIAS4Q8N2W9 510 aaPredicted RBP19.94■□□□□ 0.78
SDHAF3-201ENST00000360382 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
SDHAF3-201ENST00000360382 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
SDHAF3-201ENST00000360382 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.52
SDHAF3-201ENST00000360382 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
SDHAF3-201ENST00000360382 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
SDHAF3-201ENST00000360382 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
SDHAF3-201ENST00000360382 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
SDHAF3-201ENST00000360382 HOXD11P31277 338 aaPredicted RBP17.55■□□□□ 0.4
SDHAF3-201ENST00000360382 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
SDHAF3-201ENST00000360382 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
SDHAF3-201ENST00000360382 KCNA4P22459 653 aa17.46■□□□□ 0.39
SDHAF3-201ENST00000360382 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
SDHAF3-201ENST00000360382 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
SDHAF3-201ENST00000360382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
SDHAF3-201ENST00000360382 C1QBPQ07021 282 aaKnown RBP16.81■□□□□ 0.28
SDHAF3-201ENST00000360382 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
SDHAF3-201ENST00000360382 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
SDHAF3-201ENST00000360382 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
SDHAF3-201ENST00000360382 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
SDHAF3-201ENST00000360382 POTEHQ6S545 545 aa16.28■□□□□ 0.2
SDHAF3-201ENST00000360382 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
SDHAF3-201ENST00000360382 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
SDHAF3-201ENST00000360382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
SDHAF3-201ENST00000360382 CAPN15O75808 1086 aa16.14■□□□□ 0.17
SDHAF3-201ENST00000360382 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
SDHAF3-201ENST00000360382 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
SDHAF3-201ENST00000360382 APLP2Q06481 763 aa16.07■□□□□ 0.16
SDHAF3-201ENST00000360382 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
SDHAF3-201ENST00000360382 ZBTB22O15209 634 aa16.03■□□□□ 0.16
SDHAF3-201ENST00000360382 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
SDHAF3-201ENST00000360382 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
SDHAF3-201ENST00000360382 DSG3P32926 999 aa15.88■□□□□ 0.13
SDHAF3-201ENST00000360382 ABCB7O75027 752 aa15.82■□□□□ 0.12
SDHAF3-201ENST00000360382 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
SDHAF3-201ENST00000360382 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
SDHAF3-201ENST00000360382 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
SDHAF3-201ENST00000360382 POLA2Q14181 598 aa15.6■□□□□ 0.09
SDHAF3-201ENST00000360382 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
SDHAF3-201ENST00000360382 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
SDHAF3-201ENST00000360382 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
SDHAF3-201ENST00000360382 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
SDHAF3-201ENST00000360382 FBLN2P98095 1184 aa15.12■□□□□ 0.01
SDHAF3-201ENST00000360382 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
SDHAF3-201ENST00000360382 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
SDHAF3-201ENST00000360382 MKRN4PQ13434 485 aaPredicted RBP14.99□□□□□ -0.01
SDHAF3-201ENST00000360382 SP7Q8TDD2 431 aaPredicted RBP14.89□□□□□ -0.03
SDHAF3-201ENST00000360382 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
SDHAF3-201ENST00000360382 SPDYE2BA6NHP3 402 aa14.83□□□□□ -0.04
SDHAF3-201ENST00000360382 SPDYE6P0CI01 402 aa14.83□□□□□ -0.04
SDHAF3-201ENST00000360382 SPDYE2Q495Y8 402 aa14.83□□□□□ -0.04
SDHAF3-201ENST00000360382 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
SDHAF3-201ENST00000360382 REM2Q8IYK8 340 aaPredicted RBP14.75□□□□□ -0.05
SDHAF3-201ENST00000360382 SSUH2Q9Y2M2 353 aa14.66□□□□□ -0.06
SDHAF3-201ENST00000360382 PITPNM1O00562 1244 aa14.6□□□□□ -0.07
SDHAF3-201ENST00000360382 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
SDHAF3-201ENST00000360382 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
SDHAF3-201ENST00000360382 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
SDHAF3-201ENST00000360382 SPDYE1Q8NFV5 336 aaPredicted RBP14.51□□□□□ -0.09
SDHAF3-201ENST00000360382 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
SDHAF3-201ENST00000360382 HAX1O00165 279 aa14.39□□□□□ -0.11
SDHAF3-201ENST00000360382 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.11
SDHAF3-201ENST00000360382 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
SDHAF3-201ENST00000360382 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
SDHAF3-201ENST00000360382 EVX2Q03828 476 aa14.24□□□□□ -0.13
SDHAF3-201ENST00000360382 FKBP8Q14318 412 aa14.23□□□□□ -0.13
SDHAF3-201ENST00000360382 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
SDHAF3-201ENST00000360382 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
SDHAF3-201ENST00000360382 PROM2Q8N271 834 aa14.12□□□□□ -0.15
SDHAF3-201ENST00000360382 CREBZFQ9NS37 354 aa14□□□□□ -0.17
SDHAF3-201ENST00000360382 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
SDHAF3-201ENST00000360382 LHX8Q68G74 356 aa13.94□□□□□ -0.18
SDHAF3-201ENST00000360382 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
SDHAF3-201ENST00000360382 GABBR2O75899 941 aa13.85□□□□□ -0.19
SDHAF3-201ENST00000360382 MIER1Q8N108 512 aa13.84□□□□□ -0.19
SDHAF3-201ENST00000360382 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
SDHAF3-201ENST00000360382 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
SDHAF3-201ENST00000360382 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
SDHAF3-201ENST00000360382 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
SDHAF3-201ENST00000360382 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
SDHAF3-201ENST00000360382 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
SDHAF3-201ENST00000360382 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
SDHAF3-201ENST00000360382 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
SDHAF3-201ENST00000360382 PLSCR2Q9NRY7 297 aa13.63□□□□□ -0.23
SDHAF3-201ENST00000360382 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
SDHAF3-201ENST00000360382 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
SDHAF3-201ENST00000360382 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
SDHAF3-201ENST00000360382 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
SDHAF3-201ENST00000360382 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
SDHAF3-201ENST00000360382 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms